CLUSTAL format seed alignment for MF_00703

_____________________________________________________________________________

Features found in the protein:
The following colors are used to highlight features:
blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
magenta is used to display DISULFID, THIOLEST and THIOETH.
red is used for all other features, such as INIT_MET, ACTIVE SITE,
 METAL,BINDING, NP_BIND, SITE, REGION, etc.
The ID of the sequence used as the template for feature propagation is 
underlined.
An 'X' at the beginning or at the end of a sequence indicates that
the protein is fused with another domain respectively at its N- or
C-terminus.
Sequences that are concerned have a '_P' (for partial) suffix added
to their ID.
_____________________________________________________________________________

TYPH1_ACISJ        -------------MSDHAMNEQRDHDTRLRAWRTG------IDTYQEPIVYMRSDCVVCR
TYPH2_ACISJ        -----------MTAQMHEAGRTKEAGNRLQAWRTG------IDTYQEPVVYMRRDCPVCR
TYPH_POLSJ         -------------MQTPPTPLSSLTPHKLRLRRLG------IDTYQEPVLYMHRDCRVCH
TYPH_PARL1         --------------MSARITPQ---TPALQALRMR------LHAQHQPVVLMRTDCHVCR
TYPH_TOLAT         --------------MSARITPQ---TPALQALRMR------LHAQHQPVVLMRTDCHVCR
TYPH_CHESB         --------------MTALVSPAGPEQPSLRVRRLL------LHTQHQPVVVMHTDCHVCR
TYPH_SPHAL         --------------MTHPVPDTGPASENMAPHRLRARPLGLFLPQQQPAVVMRTDCYICR
TYPH_HAHCH         --------------------MQQRELNYLFLKRIG------INTHQEPVVYMRQDCHVCR
TYPH_MARMM         ---------MTKMIDISAMPAELSEKNTLTARRLG------IDTHEHAVIYMRADCHICR
TYPH_LEGPN         -------MHDSFLSANGGFVVSKKTPHGLRLKHLG------IKTYHEAIIYMREDCHVCH
TYPH_LEGPH         -------MHDSFLSANGGFVVSKKTPHGLRLKHLG------IKTYHEAIIYMREDCHVCH
TYPH_LEGPC         -------MHHSFLSANGGVVMSKKTAHGLRLKHLG------IKTYHEAIIYMREDCHVCH
TYPH_LEGPA         -------MHHSFLSANGGIVVSKQTSHGLRLKHLG------IKTYHEAIIYMREDCHVCH
TYPH1_CUPNH        MNDASSDPGIPGRPGDVVAAAAPREVGALVFRPLE------IDTWQEHVIYMHPDCPVCR
TYPH2_CUPPJ        MQANELK----------LAAGEGQGSEPLIFKPLG------IDTWQEHVIYLHPDCPVCR
TYPH_RALN1         ---------------MLAPPEVAALPDRLTFKPLG------IDTWQEHVIYMHPDCAICR
TYPH_BRASB         -------------MSTIDSA-----RPQLKIRSVA------LDTGRENVVVISRRSRALR
TYPH_BRASO         -------------MSPADTA-----RPQLKIRSVA------LDTGRENVVVISRRSRALR
TYPH_BRADU         --------------MHPDLP-----HSQLKIRRVR------LDTGRENVVVISRQSKALR
TYPH_RHOP5         -------------MSPVDAA-----RPQLKIRQIH------LDTGRENVAVISRHSKALR
TYPH_RHOPB         -------------MTSADAP-----RPQLKIRLIH------LDTGRENVAVMSRRSKALR
TYPH_NITHX         -------------MNGTDLP-----RLQPKIRRVN------LDTGRENVVVISRHSAALR
TYPH_RHOPA         -------------MNAPDLT-----RPPLTIRRIS------LDTGRENVAVISRRSRALR
TYPH_RHOPT         -------------MNAPDLT-----RPPLTIRRIS------LDTGRENVAVISRRSRALR
TYPH_RHOPS         -------------MNASHLS-----RPPLTIRRIS------LDTGRENVAVISRRSRALR
TYPH_STUS1         -----------MTSISSDTPLNGKAPVHLALRRVA------IDTYRENVAYLHRDCAACR
TYPH_ALBFT         ------------MRKHTDKP---QLASKLVLRRVA------IDTYRENVAYLHRDCAVYR
TYPH_METCA         ---------------MSDEE---SIKTRLKLRPVA------IDTYRENVAYLHRECSVYR
RBKTP_CUPNH_P      ------------------------------------------------------------
RBKTP_CUPPJ_P      ------------------------------------------------------------
RBKTP_AZOC5_P      --------------------------------XMA------IETGRRNVAFLARGNTVVA
RBKTP_ROSDO_P      -----------------------------XITRFP------VTIGSKQVCLVHKGNQIAS
                                                                               

TYPH1_ACISJ        SEGFTTQTRVLLTAG-TRSAVATLNVVEGN-WLAPGVAGLSEAAWHALDPAADAWINVSY
TYPH2_ACISJ        SEGFTTQARVQLTAG-GRSIVATLSVVDGD-WLAENVAGLSESAWASLGAQPGEPVAVTH
TYPH_POLSJ         SEGFEAQSRVELALG-DRTIVATLNVVSGD-FLAPDEAGLSEAAWRLLGAQEGDMVSPRH
TYPH_PARL1         AEGLAPRSQVLIIAG-DRTVQALLYQIDSD-LLKTGQIALSEAAWDALDIHEGDLVQVRH
TYPH_TOLAT         AEGLAPRSQVLIIAG-DRTVQALLYQIDSD-LLKTGQIALSEAAWDALDIHEGDLVQVRH
TYPH_CHESB         SEGLAARSQVLLTNG-ARQVHATLFQVDGDAVLSHDEVGLSETAWDLLGVAEGDEVRVSH
TYPH_SPHAL         SEGLAARSQVLIQAG-GREILASLLHSSGE-MIAPGEIGLSESAAAALGVAPGDAVSVRH
TYPH_HAHCH         SEGFNAHSRVRVTTN-KRSIIATVHQVTDG-WLSHQEAGLSDAAWRLLEAEDGEVAYFSH
TYPH_MARMM         AEGFNNHARIKVSGPSNKAIIATLNLVVTD-LLSPGQIGLSETAWLRLQLNEGDPVRLIH
TYPH_LEGPN         SEGFEVQTRIQVTLG-SRSIIATLNVVTSE-LLQPGEAGLSDYAWESLHAKEGDEIQVSH
TYPH_LEGPH         SEGFEVQTRIQVTLG-SRSIIATLNVVTSE-LLQPGEAGLSDYAWESLHAKEGDEIQVSH
TYPH_LEGPC         SEGFEVQTRIQVTLG-QHSIIATLNVVTSE-LLAPGEAGLSDYAWDALHAKEGDEIQVSH
TYPH_LEGPA         SEGFEVQTRIQVTLG-QRSIIATLNVVTSE-LLQPGEAGLSDYAWESLHAKEGDEIQVSH
TYPH1_CUPNH        AEGFSAQARVRVQIG-DRSLIATLTLLGAP-LLNTGEASLSLSAARTLSARAGDVVHVTH
TYPH2_CUPPJ        AEGFTAQARVQVRIG-EASLIATLNLVGAP-LLDTGEASLSASAAQALEARAGDVVAISH
TYPH_RALN1         AEGFTAQARVEVRIG-LRSLIATLNLVGSG-LLEMCEVSLSVSAVETLMARPGDIVTVSH
TYPH_BRASB         PEVFSGFSRVELRCN-SRTLLATLLITDDDALVGPDEIGLSQPALRRFAEPAGTFATVSP
TYPH_BRASO         PEVFSGFSRVELRCN-SRTLLATLLITDDDALVGPDEIGLSEPALRRFAEPAGMLATVSP
TYPH_BRADU         AEIFRGFSRVELRLN-GKVLLATLLITDDDTLAAQDEIGLSEPAFRRFAEPVGTLVAVTP
TYPH_RHOP5         PEVFSGFSRVEIRRG-NQSMLATLLITDDNAMVGPDDLGLAEPAFRRFGEAAGSLVSVTP
TYPH_RHOPB         PEVFSGFSRVEIRRN-AKSVLATLLITDDDALVGPDELGLAEPAFRRFGEPAGTFVTVSP
TYPH_NITHX         PEIFRGFSRVELRRN-AKIMLATLIITDDDSLVGPDDLGLSEPAFRRFAEPVGSAVTIAP
TYPH_RHOPA         PEVFRGFSRVELRIN-SKVLLATLMITDDDAMIGPDEVGLSEPAFRRFNEPVGSAVSVTP
TYPH_RHOPT         PEVFRGFSRVELRIN-SKVLLATLMITDDDAMIGPDEVGLSEPAFRRFNEPVGSAVSVTP
TYPH_RHOPS         ADVFRGFSRVALRIN-TKVLLATLMITDDDAMIGPDELGLSEPAFRRFNEPVGSAVSVSP
TYPH_STUS1         AEGFQALAKVEIRVN-GRRILASLNLVDDPSIVGCDELGLSEDAFAQLGAEAGVPAAIAQ
TYPH_ALBFT         AEGFQALSKVEVRAN-GRHILATLNVVDDPNIVACNELGLSEDAFAQMAVIDGQPASVSQ
TYPH_METCA         AEGFQALAKIRVGCN-GKQIEAVLNVVDDVCIVAPDELGLSEQAFQRFGEPAGQLVNVAQ
RBKTP_CUPNH_P      --------------------------------------------------XLRTGTRTSA
RBKTP_CUPPJ_P      -----------------------------------------------------------X
RBKTP_AZOC5_P      APDYLGPGRVDLIGE--GRSIRAEVALVGDALLPSDAVGLSSEAFGALGLPEGAELVLTR
RBKTP_ROSDO_P      RVLAGSSRVTLSLRG--KSVSAELGETWSDEIVSQDLCALSEGAMAALDAVEGDVVSIER
                                                                               

TYPH1_ACISJ        APTLDSLSHVRAKVYGHRLDAGAFNAVIGDVAAGRYSDLYLAAFVTACAGDRLDLSETVA
TYPH2_ACISJ        APPLDSLSHVRAKVYGNSLGDAQFGAIISDVAAGRYSDLHLATFITACAGDRLDLAETLS
TYPH_POLSJ         PAPIESLGHVRAKVYGRHLTQAAITAVIEDVTAGRYSDLQLAAFVTACAGDRLDQEETVS
TYPH_PARL1         PPLLESLSAVRARIHGHRLQTTELQAIVRDVVDGRYTDVALSAFLTATAVLPLDMQETIH
TYPH_TOLAT         PPLLESLSAVRARIHGHRLQTTELQAIVRDVVDGRYTDVALSAFLTATAVLPLDMQETIH
TYPH_CHESB         PPALESLASVRRRIYGHRLDAQALSEIVRDVAAGRYTDVHLAAFLTASAALPLDENETAD
TYPH_SPHAL         APPIDSFGALRGRVYGNRLDGAAFRSIVDDIVAGRYSDVHLSAFVTACSAFPLDHAETVA
TYPH_HAHCH         TKAVDSMSHVRGKLYGASLTQESADEVVKDVAGGLYSDVQLAAFVTACAGSRLNQDEVAA
TYPH_MARMM         PAPLLSLSAVRAKIFGEPLDQNNLDAIVGDIAAGRFSDIHLSAFLTASAAHEQSFEEIRD
TYPH_LEGPN         PKPLESLSYVHAKIYGNELSFEQMKVIIDDVLSGRLSDVQISAFLAASGAGRLTRTEVMK
TYPH_LEGPH         PKPLESLSYVHAKIYGNELSFEQMKVIIDDVLSGRLSDVQISAFLAASGAGRLTRTEVMK
TYPH_LEGPC         PKPLESLSYVHTKIYGNELSYEQMKVIIDDVLSGRLSDVQISAFLAASSAGRLTRTEIMK
TYPH_LEGPA         PKPLESLSYVHTKIYGKELSYEQMKVIIDDVLSGRLSDVQISAFLAASSAGRLTRTEIMK
TYPH1_CUPNH        APALESVRALRAKIYGCHLDSVQLDGIIGDISAGRYADVHIAAFLTACADGRMSLRETVD
TYPH2_CUPPJ        APALESVRALRAKIYGRRLDGAQIDSIISDISAGRYPDVYISAFLAACADGRMNRRETVD
TYPH_RALN1         APALESLRAVRAKIYGAHLDTHQLASVVGDIAKERYADVHIAAFLSACAGGRMSVKETID
TYPH_BRASB         ATPPDSLEAVRAKIRGETLSDQAISAVIDDLAHYRYSDMEIAAFLIGSASF-MTSGELLA
TYPH_BRASO         ATPPESLEAVRAKIRGETLSDEAIAAVIEDLAHYRYSDMEIAAFLIGSASF-MTSGELLA
TYPH_BRADU         ATPPESLEAVRAKIRGRTLSQAEIGAIINDLAHYRYSDMEIAAFLIGSASF-ITSDELLA
TYPH_RHOP5         ASPPASLDAVRGKIQGRTLTAPEIEAIVNDLARYRYSDMEIAAFLIGAARF-MTSDELLA
TYPH_RHOPB         ATPPDSLDAVRGKIQGRTLSAAEITAIVNDLTRYRYSDMEIAAFLIGAARF-MTSDELLA
TYPH_NITHX         AASPASLDAVRAKIMGQTFSAVDISAIIDDLTHYRYSDMEIAAFLISSASF-MTNGELIA
TYPH_RHOPA         ARSPASLDAVRAKIQGHTLSAAEITAIVDDLAHFRYSDMEIAAFLISAARF-TTTDELLA
TYPH_RHOPT         ARSPASLDAVRAKIQGHTLSAAEITAIVDDLAHFRYSDMEIAAFLISAARF-TTTDELLA
TYPH_RHOPS         AQPPASLDAVRAKIQGHTLTPAEITAVIDDVAHFRYSDMEIAAFLISAARF-TSTDELLA
TYPH_STUS1         AEPAASIPALHRKIAGERLNRDDFLAIMRDIAEHRYSKIELTAFVVACNQGELDREEVFF
TYPH_ALBFT         AEPPQSIGALRRKLAGERLGREDFLGIVRDIAELHYSKIELSAFVVATNRDELDREEVYF
TYPH_METCA         AEPPLSMDGVRRKIGGERLDYGDYQAITSDIAKGRYSKMEMAAFLVATGQNGLDRDEVLS
RBKTP_CUPNH_P      AERPASRTNLMAKLRGEPLDEAAYVAVLQDAIAGRYTEAELTEFLVAATRT-LTDEEVVA
RBKTP_CUPPJ_P      VPQPASRRHLAAKLDGQPLDEGAYEAILRDAIAGRYTAQELTAFLTAATRS-LDDREVVA
RBKTP_AZOC5_P      TPVPESRAALRRKIQGATLDEGAYAQVVGDIVEGRYPDSEVAGFLVAADRS-LSDDEVLA
RBKTP_ROSDO_P      SPTPKSRSILQKKVRGGELSHAEMEAFIHDLVNGRFSTSEIAGFLVAASNN-LTMDEVIS
                        *   :  :: *  :       .  *      .   :: *: .         *   

TYPH1_ACISJ        LTRAMVAVGHRLDWGRETVVDKHCVGGLPGNRTTLLVVPIVAACGLTMPKTSSRAITSPA
TYPH2_ACISJ        LTKAMIAVGDRIDWGRPLVVDKHCVGGLPGNRTTLLVVPIVTACGLMMPKTSSRAITSPA
TYPH_POLSJ         LTRAMVAAGERIDWGEGLVMDKHCVGGLPGNRTTMVIVPIVAACGLRMPKTSSRAITSPA
TYPH_PARL1         LTRAMVDVGDHLQWQAPIVVDKHCVGGLPGNRTTPLVVAIAAANGLVMPKTSSRAITSPA
TYPH_TOLAT         LTRAMVDVGDHLQWQAPIVVDKHCVGGLPGNRTTPLVVAIAAANGLVMPKTSSRAITSPA
TYPH_CHESB         LTGAMIAVGDRMEWDAPTVVDKHCVGGLPGNRTTPIVVAIVAANGLVMPKTSSRAITSPA
TYPH_SPHAL         LTGAMVASGERLAWGSDVVVDKHSVGGLPGNRTTPIVVAIVAALGLIMPKTSSRAITSPA
TYPH_HAHCH         LTSAMVKVGQRIDWGTSPIMDKHCVGGLPGNRTTPIVVAIVTACGLRMPKTSSRAITSPA
TYPH_MARMM         LTLSMVNVGQRLDWGRAPIVDKHCVGGLPGNRTTPIVVAICVAAGLTMPKTSSRAITSPA
TYPH_LEGPN         LTKAMIDSGDRLSWPSPLVVDKHCVGGLPGNRTTLIVVPIVASFGLMIPKTSSRAITSPA
TYPH_LEGPH         LTKAMIDSGDRLSWPSPLVVDKHCVGGLPGNRTTLIVVPIVASFGLMIPKTSSRAITSPA
TYPH_LEGPC         LTKAMIDSGDRLSWSSPLVVDKHCVGGLPGNRTTLIVVPIVAAFGLMIPKTSSRAITSPA
TYPH_LEGPA         LTKAMIDSGDRLSWSSPLVVDKHCVGGLPGNRTTLIVVPIVAAFGLMIPKTSSRAITSPA
TYPH1_CUPNH        LTRAMVRSGQRLNWDREVVADKHCVGGLPGNRTTPVVVAIAAAAGLLLPKTSSRAITSPA
TYPH2_CUPPJ        LTRAMVHSGERLSWSHAVVADKHCVGGLPGNRTTPIVVAIAAAGGLVLPKTSSRAITSPA
TYPH_RALN1         LTQAMVDSGECLEWDREIVADKHCVGGLPGNRTSPIVVAIAAAAGLLLPKTSSRAITSPA
TYPH_BRASB         LTRAMANAGTQLKWPEPVVVDKHCIGGIPGNRTSMVVVPIVAAHGLTIPKTSSRAITSPA
TYPH_BRASO         LTHAMANAGTQLTWPEPVVVDKHCIGGIPGNRTSMVVVPIVAAHGLTIPKTSSRAITSPA
TYPH_BRADU         LTGAMAQAGTQLVWPDPVVVDKHCIGGIPGNRTSMVVVPIVAAHGLPIPKTSSRAITSPA
TYPH_RHOP5         LVSAMASVGTQLRWDRPVVVDKHCIGGIPGNRTSMVLVPIVAAHGLTIPKTSSRAITSPA
TYPH_RHOPB         LVSAMASVGTQLRWDRPIVVDKHCIGGIPGNRTSMILVPIVAAHGLTIPKTSSRAITSPA
TYPH_NITHX         LVDSMARAGTQLKWRNPIIVDKHCIGGIPGNRTSMIVVPIVAAHGLTIPKTSSRAITSPA
TYPH_RHOPA         LVGAMASVGTKLTWDTPIVVDKHCIGGIPGNRTTMIVVPIVAAHGLMIPKTSSRAITSPA
TYPH_RHOPT         LVGAMASVGTKLTWDTPIVVDKHCIGGIPGNRTTMIVVPIVAAHGLMIPKTSSRAITSPA
TYPH_RHOPS         LVDAMASVGTRLKWQNPIVVDKHCIGGIPGNRTTMIVVPIVAAQGLMIPKTSSRAITSPA
TYPH_STUS1         LTDAMIRVGRRLDWREHPVVDKHCIGGIPGNRTSMLVVPIVAAHGMLCPKTSSRAITSPA
TYPH_ALBFT         LTEAMVASGRTLNWHEPLVVDKHCIGGIPGNRSSMLVVPIVAAHGLLCPKTSSRAITSPA
TYPH_METCA         LTRAMLETGVRLSWNEPLVADKHCIGGIPGNRTSLLIVPIVAAHGMLIPKTSSRAITSPA
RBKTP_CUPNH_P      LARARTAFTPRIDWDEPVVVDKHSMGGVPGSRITLIVVPIVAAYGLAMPKTSSRAITSAA
RBKTP_CUPPJ_P      LARARTRFTARIEWDEPIVVDKHSMGGIPGSRITLIVVPIVAAYGLAMPKTSSRAITSAA
RBKTP_AZOC5_P      LAKVRAKFASRITWDEPMVVDKHSMGGIPGSRITMIVVPIVAAHGLAIPKTSSRAITSAA
RBKTP_ROSDO_P      LTQVRAAFAHRHDWGKAIVVDKHSMGGVPGNRITPIIIPILAAFGLTVPKTSSRAITSAA
                   *.           *    : ***.:**:**.* : :::.* .: *:  **********.*

TYPH1_ACISJ        GTADTMEVLAPVNLDIAAMRRTVERTGGCIVWGGSVRLSPADDVLIRVERPLDLDSEGQL
TYPH2_ACISJ        GTADTMEVLAPVNLDVPSMRRVVERTGGCIVWGGSVRLSPADDILIRVERPLDLDSEGQL
TYPH_POLSJ         GTADTMETLAPVDLDVAQIRRVVERTGGCVVWGGAVRLSPADDILIRVERPLDLDSQGQL
TYPH_PARL1         GTADTMETLAPVDLDLDTLRKVVEKEGGCVAWGGAMHLSPADDIFVRIERELDIDTQGQL
TYPH_TOLAT         GTADTMETLAPVDLDLDTLRKVVEKEGGCVAWGGAMHLSPADDIFVRIERELDIDTQGQL
TYPH_CHESB         GTADTMETLAPVDLDLATLRRVVEAEGGCIAWGGAVHLSPADDIFVRVERELDVDTEGQL
TYPH_SPHAL         GTADTMETLAPVNLDVGAIRRVVDHEGGCIVWGGAVSLSPADDIIIGVERVLDLDAAGQL
TYPH_HAHCH         GTADTMETMAPVNLTLAQMKKVVEQEGGCIAWGGSVSLSPADDVLIRIERALDLDSEGQL
TYPH_MARMM         GTADTMETLAPVELDVSAMRRVVETVGGCIVWGGAVALSPVDDTLIRIERALDIDSDGQL
TYPH_LEGPN         GTADTMETLAPVHLSPQKMRQVVEQENGCIVWGGAVSLSPADDVLIRVERAIDLDSEGQL
TYPH_LEGPH         GTADTMETLAPVHLSPQKMRQVVEQENGCIVWGGAVSLSPADDVLIRVERAIDLDSEGQL
TYPH_LEGPC         GTADTMETLAPVHLSPQKMRQVVEQENGCIVWGGAVSLSPADDVLIRVERAIDLDSEGQL
TYPH_LEGPA         GTADTMETLAPVHLSPQKMRQVVEQENGCIVWGGAVSLSPADDVLIRVERAIDLDSEGQL
TYPH1_CUPNH        GTADTMEALTRVTLDSTELRRVVEQVGAALVWGGALSLSPADDVLIRVERALDIDSDAQL
TYPH2_CUPPJ        GTADTMETLTRVALSAAELRHVVERVGASLVWGGALNLSPADDILIRVERALDIDSDAQL
TYPH_RALN1         GTADTMETLTRVALSATELRRVVDRVGASLAWGGALSLSPADDVLIRVERALDVDSDAQL
TYPH_BRASB         GTADTMEVLARVNVGAEEMKSIVAACNGCVIWGGHVNLSPADDILISVERPLSLDTREQM
TYPH_BRASO         GTADTMEVLARVNVGAEEMKSIVAACNGCVIWGGHVNLSPADDILISVERPLSLDTREQM
TYPH_BRADU         GTADTMEVLARVNVGVEEMKAIVSSCNGCLIWGGHVNLSPADDVLISVERPLSLDTREQM
TYPH_RHOP5         GTADTMEVLARVDVGVPEMKEIVAACNGCLIWGGHVNLSPADDILISVERPLCLDTREQM
TYPH_RHOPB         GTADTMEVLARVDVSVAEMKEIVAACNGCLIWGGHVNLSPADDILISVERPLCLDTREQM
TYPH_NITHX         GTADTMEMLARVDVGVEEMKDIVAACRGCLVWGGHVNLSPADDILISVERPLGLDTREQM
TYPH_RHOPA         GTADTMELLARVDLDVEQMKQVVHACGGCLVWGGHVNLSPADDILISVERPLSLDTPEQM
TYPH_RHOPT         GTADTMELLARVDLDVEQMKQVVHACGGCLVWGGHVNLSPADDILISVERPLSLDTPEQM
TYPH_RHOPS         GTADTMEVLARVDLDVEQMKRVVTTCGGCLIWGGHVNLSPADDILISVERPLSLDTPEQM
TYPH_STUS1         GTADTMEVLANVELPFERLCEMVREERGCLAWGGSSDLSPADDVLIAVERPLSIDSPGQM
TYPH_ALBFT         GTADTMEVLAKVELPVDQLADIVRTHRGCLAWGGAAHLSPADDVLISVERPLAIDSPGQM
TYPH_METCA         GTADTMEVLARTDLAPESLDRLVRMERGCLAWGGTTRLAPVDDMLISVERPLGIDSQGQM
RBKTP_CUPNH_P      GTADAMETIARVDLAHEDVRRCVAQARACIAWNGRLNHSVVDDVMNAITRPLRLDSRRWS
RBKTP_CUPPJ_P      GTADAMETVARVDLTHDDVRRCVAQARACIAWNGRLNHSVIDDVMNAITRPLGLDSRRWA
RBKTP_AZOC5_P      GTADAMETLARVDLDSAEVRRTVERARGCIAWNGRLSHSALDDVMNAITRPLGLDSTRWS
RBKTP_ROSDO_P      GTADMMEVLSRVDLSPDEMKSVVEQTNGCIAWNGNLTHSPVDDVMNAINRPLGLQSTLLD
                   **** ** :: . :    :   *    ..: *.*    :  ** :  : * : :::    

TYPH1_ACISJ        VASVLSKKAAAGSTHVLIDLPVGPTAKVRSTEAAQSLGRRLVEVGRAIGLQVTLRITDGL
TYPH2_ACISJ        VASVLSKKAAAGSTHVLIDLPVGATAKVRSAHAAASLGRRLQEVGGAIGLQVFLRVTDGE
TYPH_POLSJ         VASILSKKVAAGSTHVLIDMPVGPTAKVRSAEAADLLGRLLGQVGQTLGLRMRVVQTDGL
TYPH_PARL1         IASVLSKKIAAGATHIVIDIPVGPTAKVRSRETAEHLAHHLSEVAASFGLVLRCLFTDGN
TYPH_TOLAT         IASVLSKKIAAGATHIVIDIPVGPTAKVRSRETAEHLAHHLSEVAASFGLVLRCLFTDGN
TYPH_CHESB         IASVLSKKISAGSTHVVIDIPVGPTAKVRGEDAASHLASRITAVASRFGLAATCVQTDGS
TYPH_SPHAL         VASVLSKKLAAGATHLVVDMPIGPTAKVRSPADAAALSGALQKVAAEFGLILKVMQGDGR
TYPH_HAHCH         VASVISKKVAAGSTHVLIDIPIGMTAKVRSPEYAERLASHMRYTGVKLGIQVEAMFTDGA
TYPH_MARMM         VASVLSKKIAAGATHLVIDMPVGPTAKVRTEEAAARLEGLFARVGSNLGLNLKIMRTDGS
TYPH_LEGPN         VASILSKKIATGATHAVIDIPVGPTAKVRNQSMALLLKQSLEEVGNELGLVVRALFTDGS
TYPH_LEGPH         VASILSKKIATGATHAVIDIPVGPTAKVRNQSMALLLKQSLEEVGNELGLVVRALFTDGS
TYPH_LEGPC         VASILSKKIATGATHAVIDIPVGPTAKVRNQSMALLLKQSLEEVGNELGLVVHTILTDGS
TYPH_LEGPA         VASILSKKIATGATHAVIDIPVGPTAKVRNQSMALLLKQLLEEVGNELGLVVRTLLTDGS
TYPH1_CUPNH        VASILSKKIAAGSTHVLIDVPVGPTAKIREDSDLARLDLAMTKVADAFGLKLRILRTDGS
TYPH2_CUPPJ        VASILSKKVAAGSTHILIDVPVGPTAKVREDRDLERLEAAMRHVAGAFGLHILMVRTDGT
TYPH_RALN1         AASILSKKIAAGSTHVLIDVPVGPTAKVRSLQDLERLRMLLERVARSFGVRVTIVRTDGS
TYPH_BRASB         VASILSKKLAAGSTHLLLDLPVGPTAKLSSGAEAMRLRKLFEFVGDRFGLNVEVITTDGR
TYPH_BRASO         VASILSKKLAAGSTHLLLDLPVGPTAKLTSGAEAMRLRKLFEFVGDRFGLKVEVITTDGR
TYPH_BRADU         VASIMSKKIAAGSTHLLIDIPVGPTAKVTGAVEAMRLRKLFEFVGDRFGRTVEVITTDGR
TYPH_RHOP5         VASIMSKKLAAGSTHLLVDLPLGPSAKVISPIDAMRLRKLFEFVGDHFGIAVETITTDGR
TYPH_RHOPB         VASIMSKKLAAGSTHLLVDLPVGPTAKVASALDAMRLRKLFEFVGDHFGIAVETITTDGR
TYPH_NITHX         VASILSKKLAAGSTHLLIDLPVGPTAKLVNEMEAMRLRKLFEFVGDHYGISVEVVVTDGR
TYPH_RHOPA         VASIMSKKLAAGSTRLLIDFPVGPSAKVTNANEAMRLRKLFEFVGDHFGISVEVVTTDGR
TYPH_RHOPT         VASIMSKKLAAGSTRLLIDFPVGPSAKVTSANEAMRLRKLFEFVGDHFGISVEVVTTDGR
TYPH_RHOPS         VASIMSKKLAAGSTRLLIDFPVGPSAKIASASEAMRLRKLFEFVGDHFGIAVEVVTTDGR
TYPH_STUS1         VASILSKKIAAGSTHLLLDIPIGPTAKVRSMAEAQRLRKLFEFVATRLGLTLDVVITDGR
TYPH_ALBFT         VASILSKKIAAGSTHLVLDIPIGPSAKVRSMPEAQRLRRLFEYVAGRMHLSLDVVVTDGR
TYPH_METCA         VASILSKKLAAGATHLLLDIPVGPTAKVRQMRDAMSLRKLFEYVGDRVGLHLEAVITDGA
RBKTP_CUPNH_P      VASILSKKYTAGATHVIVDLPYGPQTKLATRADAEALGALFEHVGKGLGLHVRALVTDGS
RBKTP_CUPPJ_P      VASILSKKATAGATHVIVDIPYGPQTKLSARADADALAGLFEEVGKGLGLHVRALVTDGS
RBKTP_AZOC5_P      VASILSKKLAAGSTHVVIDLPFGARARVKGAGEAHEMARLFEQVGAGLGLTVEAIPTDGS
RBKTP_ROSDO_P      VSSIMSKKLAAGSTHVLIDMPVGPKAKTRTQGEAGALKNLFESVGQGIGLNTKVQISDGT
                    :*::*** ::*:*: ::*.* *  ::         :   :  ..            ** 

TYPH1_ACISJ        QPVGRGVGPALEARDVLAVLRGQADAPDDLRQRALRLAGDILELGGAAP-NGSGLQLAAE
TYPH2_ACISJ        QPVGRGIGPALEARDVLAVLQGTREAPADLRERALRLAADILEMGGAAP-AGGGLKLATE
TYPH_POLSJ         APVGRGIGPALEARDVLAVLRNLATAPADLAQRSLLLAGEVLEFGGAAP-AGGGLALASA
TYPH_PARL1         QPVGRGIGPALEARDVLAVLRNEADAPQDLCDRVALVAGAVLELGGVAK-EGDGIRLAHE
TYPH_TOLAT         QPVGRGIGPALEARDVLAVLRNEADAPQDLCDRVALVAGAVLELGGVAK-EGDGIRLAHE
TYPH_CHESB         QPVGRGIGPALEAFDVLAVLQNASDAPDDLRRRAATLAGAALEIGRKAG-KGEGTALALE
TYPH_SPHAL         EPIGRGIGPALEARDILAVLEGR-DPPPDLARRACELAGALIELAGRAS-PGTGAALAAQ
TYPH_HAHCH         QPVGRGIGPALEARDILAVLRNQAEAPADLRVRALTLAGRLLEIGGVAS-HGAGVARARE
TYPH_MARMM         QPVGRGIGPALEAWDVLAVLNNEGHNVPDLTVQATLLAGELLEMGQAAP-AGRGAELATE
TYPH_LEGPN         QPVGHGIGPSLEARDVLAVLQGLPDAPNDLRERALTLAGAALECSSKVP-PGLGKSIATQ
TYPH_LEGPH         QPVGHGIGPSLEARDVLAVLQGLPDAPNDLRERALTLAGAALECSSKVP-PGLGKSIATQ
TYPH_LEGPC         QPVGHGIGPSLEARDVMSVLQGLPDAPNDLRERALTLAGAALECSSKVQ-PGLGKSIAKQ
TYPH_LEGPA         QPVGHGIGPSLEARDVMAVLQGLPDAPNDLRERALTLAGAALECSSKVP-PGLGKSIATQ
TYPH1_CUPNH        QPVGRGVGPALEALDVLAVLQCQPTAPADLRERSLLLAGELLEFCGAIP-PGQGRLLAGS
TYPH2_CUPPJ        QPLGRGIGPALEARDILAVLQRTVAAPPDLRERSVMLAGALLEFCGAAP-RGAGEKAAGQ
TYPH_RALN1         QPVGRGIGPALEARDVLAVLQRSPAAPFDLRERSLLLAATLLEFCGAVE-QGAGLEMATG
TYPH_BRASB         QPIGNGIGPVLEARDVMAVLGNEPGAPADLREKSLRLAAHLLEYDPKLR-GGAGYQRARE
TYPH_BRASO         QPIGHGIGPVLEARDVMAVLGNEPQAPADLREKSLRLAAHLLEYDPKLR-GGAGYSRARE
TYPH_BRADU         QPIGNGIGPVLEANDVMAVLGNDKDAPRDLREKSLRLAAHLLEYDPKLR-GGAGYARARE
TYPH_RHOP5         QPIGNGIGPVLEAQDVMAVLGNDPKAPADLREKSLRLAGHLLEYDPNLR-GGSGYARARE
TYPH_RHOPB         QPIGNGIGPVLEAQDVMAVLGNDPKAPADLREKSLRLAAHLLEYDPHLR-GGAGYARARE
TYPH_NITHX         QPIGNGIGPVLEAQDVMAVLANDPEAPADLREKSLRLAAHLLEYDPKLR-GGSGYARARE
TYPH_RHOPA         QPIGRGIGPVLEARDVMAVLGNEPGAPADLREKSLRLAAHLLEYDPKLR-GGTGYARAKE
TYPH_RHOPT         QPIGRGIGPVLEARDVMAVLGNKPGAPADLREKSLRLAAHLLEYDPKLR-GGTGYARAKE
TYPH_RHOPS         QPIGRGIGPVLEARDVMAVLGNEPNAPADLREKSLRLAAHLLEYDPLLR-GGAGYARAKE
TYPH_STUS1         QPIGNGIGPVLEARDVIQVLQNDPAAPIDLRQKALRLAGRMLEFDPDVR-GGDGYAIARD
TYPH_ALBFT         QPIGNGIGPVLEARDVMRVLENDPRAPNDLRQKSLRLAGRLIEFDPDVR-GGDGFAIARD
TYPH_METCA         QPVGRGIGPVLEVRDVMQVLENDPEAPVDLREKSLRLAGRILEFDPDVR-GGFGYSIARD
RBKTP_CUPNH_P      GPIGRGIGPALEVRDVRLVLDNAPDAPADLRDKALRFAGEIIAFDPRVDSPEHGMQIAAA
RBKTP_CUPPJ_P      RPIGRGVGPALEVRDVRQVLENHPDAPMDLREKALRFAGEIIAFDPRVASAAQGMRIATA
RBKTP_AZOC5_P      APIGRGIGPALEVRDVLWVLEDHSEAPPDLKEKALFFASRILAWDPAVG-PDRARARAEE
RBKTP_ROSDO_P      KPIGRGVGPVLEALDVLSVLRGEAGAPTDLLDKSIGYAATILEWSGAVS-QGQGAQVTRD
                    *:*.*:** **. *:  **        **  :    *.  :           .   :  

TYPH1_ACISJ        VLADGRAWAKFQAICEAQGGLR----EVPVTPYRQVITAAVAGRVAAIDNRVLARAAKLA
TYPH2_ACISJ        VLADGRAWAKFQAICSEQGGLR----SLPMAAHLHTVESPGTGRVTRIDNRLLARAAKLA
TYPH_POLSJ         VLADGRAWRKFQDICAAQGGLR----EPPVAAHQQAVHALRSGSVLAIDNRRLARIAKLA
TYPH_PARL1         TISSGRAWEKFQRICAAQGGFR----EPPQALYVEPLLATTSGRAVHIDNRKLSRLAKLA
TYPH_TOLAT         TISSGRAWEKFQRICAAQGGFR----EPPQALYVEPLLATTTGRAVHIDNRKLSRLAKLA
TYPH_CHESB         TLADGRAWKKFEAICEAQGGLR----APPRAAHVHPLVAPRAGRVVHINNRKLSRLAKLA
TYPH_SPHAL         VLADGSAWSKFQRICEAQGGMR----TPPLSNHRHVMTAQRPGRVSAIDNRRLAKLAKLA
TYPH_HAHCH         TLESGAALHKFMAICEAQGGFR----EPALAPHCYEATADRVGVVSFVNNRFVAKLAKLA
TYPH_MARMM         LLVNGRAWRAFEAICEAQGGFR----EPPTAPHYQVIQSPRDGVVGRIDNRRLAKAAKLA
TYPH_LEGPN         LLESGQAFKKFQAICEAQGGMR----ELTKARFTYPVVAAKEGKVSLIDNRKLAKIAKLA
TYPH_LEGPH         LLESGQAFKKFQAICEAQGGMR----ELTKARFTYPVVAAKEGKVSLIDNRKLAKIAKLA
TYPH_LEGPC         ILESGKAFKKFQAICEAQGGMR----ELTKARFTHPVVAAKEGKVSLIDNRKLAKIAKLA
TYPH_LEGPA         LLDSGQAFKKFQAICEAQGGMR----ELTKARFTYPVVAAKAGKVSLIDNRKLAKIAKLA
TYPH1_CUPNH        LLDSGAAWARFQAICEAQGGLR----TPGQAVFRRDVVAARSGIVTSVDNRHVARTAKLA
TYPH2_CUPPJ        LLDSGAAWRKFQAICEAQGGLR----VPGEAIFRRDIVAPHAGKVIAIDNRHIARTAKLA
TYPH_RALN1         VLDSGAAWRKFEEICEAQGGLR----VPGEAIFRRDVVAEQDGIVTEIDNRHLARIAKLA
TYPH_BRASB         LLDSGAALKQMQKIIDAQGPT---TSRNELGDLAFDVKAGRDGIVSAIDCLRLNRLARTA
TYPH_BRASO         LLDSGAALKQMQKIIDAQGPS---AGRSELGDLAFDVGAASDGVVSAIDCLRLNRLARTA
TYPH_BRADU         LLDSGAALKQMQKIIDAQGPS---TCSTELGSLSFDIKAAHDGTVSAIDCLRLNRLARTA
TYPH_RHOP5         LLESGAALKQMQKIIDNQGPT---NCRKDLGTLTTDIVAPRDGVVTGIDNLQLNRLARTA
TYPH_RHOPB         LLESGAALKQMQKIIDNQGPS---TCHKDLGTLTAEVTAERDGVVSAIDCLQLNRLARTA
TYPH_NITHX         LLDSGAALKQMQKIIDAQGPP---TCCTDLGNLTFDVTASRDGFVSGINCLQLNRLARIA
TYPH_RHOPA         LLDSGAALKKMQQIIDAQGPS---PCPAELGSYAADVLAAADGVVNGIDCLRINRLARSA
TYPH_RHOPT         LLDSGAALKKMQQIIDAQGPS---PCPAELGSYAADVLAAADGVVNGIDCLRINRLARSA
TYPH_RHOPS         LLDSGAALKKMQQIIDAQGPS---VCNSELGSHAADVLAPADGVVNGIDCLRINRLARTA
TYPH_STUS1         ILDSGRALKKMRSIIAAQGGKPFDHNHPPLARLSFDVLADCDAVVTGIDNLQLARIARLA
TYPH_ALBFT         ILDSGRALAKMNAIIAAQGAKPFDHNHPQLGALTFDICASESGVVTGIDNLQVARIARLA
TYPH_METCA         ILESGRALAKMHRIIDAQGRQ---ERRLEPGRLVFEVRAERAGVVVGIDNFFLAQTARLA
RBKTP_CUPNH_P      LLHEGKARAAFDRIAAAQGVRC---DPVAPGTHTLVVPATTRGRVAGVDGLQISGVARAA
RBKTP_CUPPJ_P      LLDEGSARAAFDRIVATQGIRP---DPVAPGAHTHVIVAPAEGRVAAINGWQISGIARAA
RBKTP_AZOC5_P      LLASGAARAALERIVEAQGRWS---EPVRPARLTHTVTAQNDGQVSDIDGFAVAGIARLA
RBKTP_ROSDO_P      LVSSGKAFEKLFEIRDAQGRQH---DPLQPGQFTEDICADRSGRVEAIDIQGISEVARLS
                    : .* *   :  *   **                   :   . .  ::   :   *: :

TYPH1_ACISJ        GAPKAPAAGVDVHARIGDPVQAGQPLFTLHAQTAGELDYAGHFVDTRPPIFQISEEA---
TYPH2_ACISJ        GAPTAPAAGIDVHARLGDRVEAGQPLFTLHAQAPGELAYALEFVRARPPIFQISENV---
TYPH_POLSJ         GAPGAACAGIDLHVRPGEFVERGQPLFTLHAATPGELAYALEYAASQAETVHVLEDA---
TYPH_PARL1         GAPESPAAGIQLQVRLGDEVTRGQSLMFLHAQTSGEMAYALAYVHDIGDIVKIEP-----
TYPH_TOLAT         GAPESSAAGIQLQVRLGDEVTSGQPLMFLHAQTSGEMAYALAYVHDIGDIVNIEP-----
TYPH_CHESB         GAPESKAGGVHMDVRLGDEIDRGQPLLHVHAETTGELAYALDYAARAGDIVEIEA-----
TYPH_SPHAL         GAPAAKSAGLEMHVRLGSAVETGTPLLTVHAESQGELAYALAYAEAVGPILELSDR----
TYPH_HAHCH         GAPSNSSAGVDFHVKLGQKVRVGEPLFSIYAEAPGELAYALDFLRDHPNEIRIEEESL--
TYPH_MARMM         GAPASKAAGIVLHAKLGSQMVKGQPLYSLHSQSLGELSYAHDYLASQPEIIEIEEEQCPR
TYPH_LEGPN         GAPKSKSAGIDLHAHVGESVEQGEPLFTIHSESLGELHYACDLLRDKQDIIILGENP---
TYPH_LEGPH         GAPKSKSAGIDLHAHVGESVEQGEPLFTIHSESLGELHYACDLLRDKQDIIILGENP---
TYPH_LEGPC         GAPKSKSAGIDLHAHVGESVEQGEPLFTIHSESSGELNYACDLLRDKQDIIILGENS---
TYPH_LEGPA         GAPKSKSAGIDLHSHVGESVEKGEPLFTIHSESSGELHYACDLLRDKQDIIILGENS---
TYPH1_CUPNH        GAPRRQVAGLELHVRAGDEVVAGAPLCTLHAQASGELEYAFSYALAHDPFRIE-------
TYPH2_CUPPJ        GAPMRQVAGLEMRVRVNDEVRAGQPLFTVHAQASGELDYSCSYALAHPAVSIEPH-----
TYPH_RALN1         GAPMRQVAGVEMHVRLHDQVKAGRPLFTIHAQASGELEYSVAYALMHPAVSIAPT-----
TYPH_BRASB         GAPINKGAGIRLFKKIGDRVDQGEPLYRVFTCDPSEHDLAVAAAAADHGYGFADEPNGHQ
TYPH_BRASO         GAPVNKGAGIRLYKKIGDRVDQGEPLYRVFTCDPSEHDLAAAAASANNGYVLDG-PNGPH
TYPH_BRADU         GAPLDKGAGIRLFKKIGDHVEQGEPLYRVYAFDQPEHDLAASAAAAGNGYAVDGHDALPS
TYPH_RHOP5         GAPIDKGAGIKLFKKVGDRVEQGEPLYRIYAFDPSEQELAVSAAEESSGYTVDGVHAFRE
TYPH_RHOPB         GAPIDKGAGIRLFKKVGDRVEAGEPLYRIYAFDPAERELAVAAAKLACGYTVDDAQTFRE
TYPH_NITHX         GAPIDKGAGIRLFKKIGDRVQQGEPLYRIHAFERSGRDLAAAGT---TAYTIDSEESNLE
TYPH_RHOPA         GAPVAKGAGIDLFKKIGDRVEKGEPLYRVYASDRSEFDLALAAAQAESGFAINHHTPADV
TYPH_RHOPT         GAPVAKGAGIDLFKKIGDRVEKGEPLYRVYASDRSEFDLALAAAQAESGFAINHHTPADV
TYPH_RHOPS         GAPIVKGAGIDLFKKIGDRVDQGEPIYRIYASDRSELDLAIAAAEAESGFSVNHHSPAAV
TYPH_STUS1         GAPKVQGAGVDILRKLGEPVRAGDCLYRVYADFPADLAFARQATERASGVSLGSPEQVPT
TYPH_ALBFT         GAPKVIGAGIDLFHKLGEAVTSGEVLYRVHAGFQSDLDFARQACAKSTGYTLGRAEDVPH
TYPH_METCA         GAPMSRGAGVDLLNKLGDTVEEGQPLYRVYAEFPANFEFAREFTRTRSGYNIGDAAFLTK
RBKTP_CUPNH_P      GAPRDGGAGVDMLCAIGAKVAPGQPLYRIHSDSAEALEAAAALVRAGG------ECCQAV
RBKTP_CUPPJ_P      GAPRSAGAGIDLLCTIGERVAAGEPLYRIHAESAADLATAVAMTGPAG------EASTAV
RBKTP_AZOC5_P      GAPLDKGAGIDLKARVGDVVRAGDPLFVIHASTAADLEAAAGAALAFDGYGIMMDGKAFR
RBKTP_ROSDO_P      GAPKDKAAGVVLNVQVGDQIAEKQPLLRVHSSSLRGIEEAVCAAQAQS----------AF
                   ***    .*: .       :     :  :.:        :                    

TYPH1_ACISJ        ------
TYPH2_ACISJ        ------
TYPH_POLSJ         ------
TYPH_PARL1         ------
TYPH_TOLAT         ------
TYPH_CHESB         ------
TYPH_SPHAL         ------
TYPH_HAHCH         ------
TYPH_MARMM         ------
TYPH_LEGPN         ------
TYPH_LEGPH         ------
TYPH_LEGPC         ------
TYPH_LEGPA         ------
TYPH1_CUPNH        ------
TYPH2_CUPPJ        ------
TYPH_RALN1         ------
TYPH_BRASB         R-----
TYPH_BRASO         ------
TYPH_BRADU         KTAS--
TYPH_RHOP5         QVL---
TYPH_RHOPB         QVM---
TYPH_NITHX         ATP---
TYPH_RHOPA         DLVS--
TYPH_RHOPT         DLVS--
TYPH_RHOPS         EPVS--
TYPH_STUS1         VFVEF-
TYPH_ALBFT         VFTEF-
TYPH_METCA         THMEF-
RBKTP_CUPNH_P      RIDPD-
RBKTP_CUPPJ_P      RVDPD-
RBKTP_AZOC5_P      RINPER
RBKTP_ROSDO_P      KIL---