CLUSTAL format seed alignment for MF_01888

_____________________________________________________________________________

Features found in the protein:
The following colors are used to highlight features:
blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
magenta is used to display DISULFID, THIOLEST and THIOETH.
red is used for all other features, such as INIT_MET, ACTIVE SITE,
 METAL,BINDING, NP_BIND, SITE, REGION, etc.
The ID of the sequence used as the template for feature propagation is 
underlined.
A '<' at the beginning of a sequence or '>' at the end indicate that
 the protein is fused with another domain either at the N- or C-terminus.
_____________________________________________________________________________

RRAB_ECOLI      -------MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEA
RRAB_SHIFL      -------MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEA
RRAB_ECO57      -------MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEA
RRAB_SALTY      -------MANPELLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDFETLEKAAVEA
RRAB_SALTI      -------MANPELLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDFETLEKAAVEA
RRAB_CROTZ      -------MANPELLEEQREETRLIIEELLEDGSDPEALYTIEHHFSADDFDTLEKLAVEV
RRAB_PANAM      -------MAFEALLEEQREETRLIIEELLEDGSDPDALYTIEHHLSCNNFDSLEKAAVDA
RRAB_PROMH      -------MADSKELAEQREETRLIIEELLEDGSDPDALYAIEHHISCENFETLEKAAVEV
RRAB_SODGM      -------MAHS-FLDEQREETRLIIDELLEDGSDPEALYTIEHHLSADDFDTLEKVAVEA
RRAB_XENNA      -------MADPHVLEEQFEETRSIIEELLEDGSDPDATYIIEHHFSAEDFDQLEKAAVEA
RRAB_HAEIN      ----------MSKLAELQAETREIIEDLLNDGSEPNALYIIEHHIAHHDFDLLEKIAVDA
RRAB_ACTSZ      --------MTHATPQELQAETREIIENLLNDGSDPNALYIIEHHIAHYDFDKLEKIAVDA
RRAB_HAEDU      ----------MYDLTALRQQTDEIIDNLLKDGSDPEALHIIEHHIAHHDFDKLEKLVVDA
RRAB_ALIFM      MSQEDEYLSVEQFLELQKAETREIIESLKADGSEPDALYAIEHHLMAEDFKALENAVVEA
RRAB_PHOPR      -------MSYAELIEEQKEETRDIIAALLEDGSEPEALYTIEHHFSADTFAELEAAAVEA
RRAB_SHESH      -------MSIDRLLKAQKQENLEIVTAILDDGSKPDAEYTIEHHFSSTNFDRLEKAAVDA
RRAB_SHEDO      -------MSMERQLKEQFAENREIVEALLGDGSDADSEYVIEHHFSSTNFDKLEKAAVDA
RRAB_SHEAM      -------MSIERLLKAQQEETRDIVQSLLDDGSDPDAEYMIEHHFSSTNFDRLEKAAVDA
RRAB_AERHH      -------MSLDMQ--EWREETTAIVNELLADGSNPDLEYEIEHHFACQDFDLLEKAAVDL
RRAB_AERS4      -------MSLDMQ--EWRAETTAIVNELLADGSNPDLEYDIEHHFACQDFDQLEKAAVDL
RRAB_ALTMD      ------MNQFDERE-EWYAFNQETIDALLEDGSQADADYTIEHHFASTDFDVLEKAAVDA
RRAB_PSEA6      -------MSTEEQA-EWFEFNQETVEALIEDGSDSTKPHTIEYHFAGDDFDVLEKAAVDA
RRAB_PSYIN      ---MEKALSLEELLAEYREETEEIVEAILEDGSNPDAVYMIEHHLSCTDFDVLEKAAIAC
RRAB_COLP3      --------MIDEELQQWFSHTEMLIAELLEDGTNDEVYHTIEHHFASSDFDLLEKAAIAA
RRAB_PSET1      -------------MENWREISEDIVSSLLEDGSDPEILYEVEHHFVCEDFPKLEQAALAA
RRAB_IDILO      ---------MSRDLNDLLTQSEETVQALIADGAETELLYEIEHHLASQDFTKLEKAAVEL
                                    .   :  :  **:.    : :*:*:    :  **  .:  

RRAB_ECOLI      FKLGYEVTDPEELEV--EDG-DIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDG
RRAB_SHIFL      FKLGYEVTDPEELEV--EDG-DIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDG
RRAB_ECO57      FKLGYEVTDPEELEV--EDG-DIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDG
RRAB_SALTY      FKLGYEVTEPEELEV--EEG-DTVICCDILSECALNAELIDAQVEQLMNLAEKYDVEYDG
RRAB_SALTI      FKLGYEVTEPEELEV--EEG-DTVICCDILSECALNAELIDAQVEQLMNLAEKYDVEYDG
RRAB_CROTZ      FKLGYEVTDPEELEL--EEGGETVICCDALSECALNAELIDAQVEQLMNMAEKFNVEYDG
RRAB_PANAM      FKLGYEVTEPEELEL--EDG-TTVMCVDILSEGALKAELIDAQVEQLVNLVAKYNVDYDG
RRAB_PROMH      FKLGYEVTEPEEIEI--ESG-EILVCFDAVSESGLNAELIDAQVEQLMNLAEKMGVYYDG
RRAB_SODGM      FKLGYEVTDAEELEV--EGG-EKLMCCDAVSEIALQAELIDAQVEQLFTLTQRLEVNYDG
RRAB_XENNA      FKLGYEVTDAEELET--EDR-VILMCCDVISESRLEVDLINAQVKQLADLAEKMGVNYDG
RRAB_HAEIN      FKAGYEVSEAEEFKD--DDG-KPIFCFDIISEVELKAEIIDAQQKEILPLLEKHNGIYDG
RRAB_ACTSZ      FKAGYEVSDAEELED--DNG-KPLYCFDIVAEVELKAEIIDAQQQQLVPLVAKHGGIYDG
RRAB_HAEDU      YKLGYEISEAEEIED--DQG-NVLFVCDIVSEVKLNGDIITAQQQELLPLIEKAAAEYEG
RRAB_ALIFM      FKMGFEVLEAEELE---DEDGAKILCCDAVMDSALDAEVIDAQVEKLVNLAEKYDIIYDG
RRAB_PHOPR      FKMGFEVLEAEELELAPEDGGGKVVCFDAVMESALNAELIDEQTEKLIALADKHDIDYDG
RRAB_SHESH      FKAGFEVNDAEEMEL--EDG-SVIFCFDAIAHHKLEVEMLDKACEALLVLAAKQKVDYDG
RRAB_SHEDO      FKLGFEVNDAEEMEL--EDG-SEIFCFDAIANHKLDVALLDKACEQLMQVAHKQKVDYDG
RRAB_SHEAM      FKLGFEVTDAEELEL--DDG-SVILCFDAIANHALDVDLIDKACEQLINLAAKQKVDYDG
RRAB_AERHH      FKAGFEVTDAEEMEL--DDG-ATIFCFDATTECKLDIETIVADIAKMLPILEKYGVDYDG
RRAB_AERS4      FKAGFEVTDAEEMEL--DDG-APIFCFDATIERKLDIETIVADIEKMLPILKKYGVDYDG
RRAB_ALTMD      FKAGFEVTDAEELML--DDG-ETIFCFDAVVERKLDIEKLNADADALLKIADKHDVTYDG
RRAB_PSEA6      FKAGFEVGDAEELML--DDG-GTIFCFDAVVERLLDVDLINADTVKLLAIAQKQNVQFDG
RRAB_PSYIN      FKKGYEVTDPEECEL--EDG-SIILSFDVTVEMNLDEEAIMEDIEKLVVLAQSFSIDYDG
RRAB_COLP3      FKLGLEIEEPEEAEL--ENG-DKVFAFDIATEQMLDVNLIKKETQAMFELAKQCGVDYDG
RRAB_PSET1      FKLGYDVEEPAELEL--EDG-AKIWSFDIVVESELDVDVIMEDVDKLAALAVECEVEYDG
RRAB_IDILO      VKQGYHVDDADEFED--ERG-KRWFAFMAVTDAELDNDILNRQVREIAAIADECEVEYDG
                 * * .: :. *     :             .  *.   :      :  :       ::*

RRAB_ECOLI      WGTYFEDPNGE-DGDDE---DFVDE-----------DDD-----GVRH-
RRAB_SHIFL      WGTYFEDPNGE-DGDDE---DFVDE-----------DDD-----GVRH-
RRAB_ECO57      WGTYFEDPNGE-DGDDE---DFVDE-----------DDD-----GVRH-
RRAB_SALTY      WGTYFEDPNGE-EGDDD---DYVDE-----------DDD-----GVRH-
RRAB_SALTI      WGTYFEDPNGE-EGDDD---DYVDE-----------DDD-----GVRH-
RRAB_CROTZ      WGTYFEDPDGEGEDEDD---EGMDE-----------DDD-----GVRH-
RRAB_PANAM      WGTYFEDPNAQDDDEDDG--EAIDE-----------DDN-----GIRH-
RRAB_PROMH      WGTYFEDPDAEYDDEDGENEDDESE-----------SDK-----SSRLH
RRAB_SODGM      WGTYFEDPDGEEEEGDEFDQDDEDG-----------PADRDEVPATRH-
RRAB_XENNA      WGTYFEDPNAPDDEDDND--DLFPP-----------EED-----EPRLH
RRAB_HAEIN      WGTYFEDPNADDDEYGDDGEFLDDEDEYGDDGEFFDDEDEE---EPRVH
RRAB_ACTSZ      WGTYFEDPNADEDEYGEDGEFFDDE---------FADDDEK---R----
RRAB_HAEDU      WGTYFEDPNAEEDEYGDDGEFFDDE----------DEADFN---NAKVH
RRAB_ALIFM      WGTYYEG-EDAEYDVIE------DG-----------DED----------
RRAB_PHOPR      WGTYFESDEDDEEDESE------DK-----------PEA----------
RRAB_SHESH      WGTFFIDEDGNEYIDDDEYVDDDEEFEEKPVH-----------------
RRAB_SHEDO      WGTYFIG---------DEIEEDDE--EEQA-------------------
RRAB_SHEAM      WGTYFMGDDED---FDDEDDDEDYDKDGFPIERH---------------
RRAB_AERHH      WGTYFQE------------------------------------------
RRAB_AERS4      WGTYFQE------------------------------------------
RRAB_ALTMD      WGTYFEPREEGEYEEEEHHLND---------------------------
RRAB_PSEA6      WGTYFIES-----------------------------------------
RRAB_PSYIN      WGTYPEE------------------------------------------
RRAB_COLP3      WGTYFEE------------------------------------------
RRAB_PSET1      WGTYFQE------------------------------------------
RRAB_IDILO      WGTLIEDEELDDEDLDDGEE-----------------------------
                ***