HAMAP: Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) complete proteome
General information

Species:  Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
Species code: GEOSL
Taxonomy: Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter (TaxID: 243231) [NEWT/ NCBI]
Description: Geobacter species plays a role in the bioremediation of organic contaminants and radioactive metals in subsurface environments as well as in harvesting electricity from aquatic sediments and other waste organic material.
Properties: Presence of flagella: Yes
Human pathogen: No
Interaction: No
Number of membranes: 2
Number of inteins:0
Statistics: Number of GEOSL entries in the UniProt Knowledgebase: 3415 (401 in UniProtKB/Swiss-Prot + 3014 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    ATCC 51573 / DSM 12127 / PCA
Genome structure:
Chromosome EMBL accession number AE017180 (circular; 3,814,139 bp) (download entry)
Reference(s):
[1] PubMed=14671304; [ NCBI , EBI , Israel , Japan ]
Methe B.A., Nelson K.E., Eisen J.A., Paulsen I.T., Nelson W.C., Heidelberg J.F., Wu D., Wu M., Ward N.L., Beanan M.J., Dodson R.J., Madupu R., Brinkac L.M., Daugherty S.C., DeBoy R.T., Durkin A.S., Gwinn M.L., Kolonay J.F., Sullivan S.A., Haft D.H., Selengut J., Davidsen T.M., Zafar N., White O., Tran B., Romero C., Forberger H.A., Weidman J.F., Khouri H.M., Feldblyum T.V., Utterback T.R., Van Aken S.E., Lovley D.R., Fraser C.M. ;
"Genome of Geobacter sulfurreducens: metal reduction in subsurface environments.";
Science 302:1967-1969(2003).
Web links:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Geobacter&GLspecies=sulfurreducens&GLstrain=PCA
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid243231%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Gsul_PCA
JVCI CMR: http://cmr.jcvi.org/tigr-scripts/CMR/GenomePage.cgi?database=ggs
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Geobacter_sulfurreducens.html
PEDANT: http://pedant.gsf.de/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p192_Geo_sulfu
 EBI Proteome Analysis page



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