Home Proteomes Families Hamap-Scan Documents Downloads Links
HAMAP: Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) complete proteome
General information

Species:  Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6)
Species code: PSE14
Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas savastanoi (TaxID: 264730) [NEWT/ NCBI]
Description: Pseudomonas syringae pv. phaseolicola is the seed-borne causative agent of halo blight disease in Phaseolus vulgaris, the common bean. The combination of functional effector and resistance genes in races of Pseudomonas syringae pv. phaseolicola and cultivars of Phaseolus, respectively, determine the outcome of the plant-pathogen interaction. Classification of strains of Pseudomonas syringae pv. phaseolicola into races is based on their differential abilities to cause disease in diagnostic cultivars of Phaseolus. Pseudomonas syringae pv. phaseolicola (strain 1448A) belongs to the race 6 pathotype whose members are virulent on all Phaseolus vulgaris varieties examined.
Properties: Presence of flagella: Yes
Human pathogen: No
Interaction: Plant pathogen
Number of membranes: 2
Number of inteins:0
Statistics: Number of PSE14 entries in the UniProt Knowledgebase: 5045 (544 in UniProtKB/Swiss-Prot + 4501 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    1448A / Race 6
Genome structure:
• Chromosome EMBL accession number CP000058 (circular; 5,928,787 bp) (download entry)
• Plasmid large EMBL accession number CP000059 (circular; 131,950 bp) (download entry)
• Plasmid small EMBL accession number CP000060 (circular; 51,711 bp) (download entry)
Reference(s):
[1] PubMed=16159782; [ NCBI , EBI , Israel , Japan ]
Joardar V., Lindeberg M., Jackson R.W., Selengut J., Dodson R., Brinkac L.M., Daugherty S.C., DeBoy R.T., Durkin A.S., Gwinn Giglio M., Madupu R., Nelson W.C., Rosovitz M.J., Sullivan S.A., Crabtree J., Creasy T., Davidsen T.M., Haft D.H., Zafar N., Zhou L., Halpin R., Holley T., Khouri H.M., Feldblyum T.V., White O., Fraser C.M., Chatterjee A.K., Cartinhour S., Schneider D., Mansfield J.W., Collmer A., Buell R. ;
"Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition.";
J. Bacteriol. 187:6488-6498(2005).
Web links:
Official genome site(s):
http://pseudomonas-syringae.org/
Other web sites:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Pseudomonas&GLspecies=syringae&GLstrain=phaseolicola1448A
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid264730%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Psyr_PHASEOLICOLA_1448A
JVCI CMR: http://cmr.jcvi.org/tigr-scripts/CMR/GenomePage.cgi?database=gphas
PEDANT: http://pedant.gsf.de/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p12416_Pse_syrin
 EBI Proteome Analysis page



Tools