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Species code:	SILPO
Taxonomy:	Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria (TaxID: 246200) [NEWT/ NCBI]
Description:	Silicibacter pomeroyi is a member of the marine Roseobacter clade whose relatives comprise 10-20% of coastal and oceanic mixed-layer bacterioplankton. It relies on a lithoheterotrophic strategy that uses inorganic compounds to supplement heterotrophy and it harbors genes advantageous for associations with plankton and suspended particles. Silicibacter pomeroyi has a physiology distinct from that of marine oligotrophs.
Properties:	Presence of flagella: Yes Human pathogen: No Interaction: No Number of membranes: 2 Number of inteins:0
Statistics:	Number of SILPO entries in the UniProt Knowledgebase: 4242 (369 in UniProtKB/Swiss-Prot + 3873 in UniProtKB/TrEMBL)

Genome structure:	• Chromosome EMBL accession number CP000031 (circular; 4,109,442 bp) (download entry) • Plasmid megaplasmid Spo EMBL accession number CP000032 (circular; 491,611 bp) (download entry)
Reference(s):	[1] PubMed=15602564; [ NCBI , EBI , Israel , Japan ] Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B., Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.M., Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E., Sheldon W.M., Ye W., Miller T.R., Carlton J., Rasko D.A., Paulsen I.T., Ren Q., Daugherty S.C., DeBoy R.T., Dodson R.J., Durkin A.S., Madupu R., Nelson W.C., Sullivan S.A., Rosovitz M.J., Haft D.H., Selengut J., Ward N. ; "Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine environment."; Nature 432:910-913(2004).
Web links:	CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Silicibacter&GLspecies=pomeroyi&GLstrain=DSS3 Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid246200%5Borgn%5D GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Spom_DSS3 JVCI CMR: http://cmr.jcvi.org/tigr-scripts/CMR/GenomePage.cgi?database=gsi PEDANT: http://pedant.gsf.de/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p281_Sil_pomer  EBI Proteome Analysis page

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