CLUSTAL format seed alignment for MF_04020
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Features found in the protein:- The following colors are used to highlight features:
- blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
- magenta is used to display DISULFID, THIOLEST and THIOETH.
- red is used for all other features, such as INIT_MET, ACTIVE SITE,
METAL,BINDING, NP_BIND, SITE, REGION, etc.
- The ID of the sequence used as the template for feature propagation is
underlined.
- A '<' at the beginning of a sequence or '>' at the end indicate that
the protein is fused with another domain either at the N- or C-terminus.
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SCP_HHV11 ------------------------MAVPQFHRPSTVTTDSVRALGMRGLVLATNNSQFIM
SCP_HHV2H ------------------------MAAPQFHRPSTITADNVRALGMRGLVLATNNAQFIM
Q805Z3_CHV1 ----------------------MADADPRFHLPDTLHPERIQALGLREIVLAVNEAR-PI
A0A060Q0V9_9ALPH ----------------------MANA-VQFHRPNSVNADDVRAMSLRDLVLAVNTSR-NI
J9QQS7_9ALPH ---------------------------MDFSRPDSITADGVRQLSLRDIVLAVNDAR-RM
E2IUD4_SHV1 ------------------------MAAVNFSHPDSISARAVGAMELRDIIRAVNSTA-PI
SCP_GAHVM ---------MSRASSQQASPTSQ---TFDPSDLSTYTLDVLHHYPLVDLLQQLNAIPNDL
Q9WSX8_9ALPH ---------MSRTPSPQLSPVSQ---AFDPSDLSTYKLDVLVNYPLSDLVHHLNAIPRNL
A0A068EVY6_9ALPH ---------MANKDSARKDAGRKDVGPFDPVNLDTYRLDLLKEVPLIDLINALNDLPVHT
A2TIV6_9ALPH ---------MSN------SGGSSCQATFDPRRPETYTYEALSAVPFFALLMELNSVSGHA
SCP_EHV1B --------------MAADKQQQQAPVAFNPADPPNIKAANFKDMLPVDVITILNQNIDEL
SCP_EHV1V --------------MAADKQQQQAPVAFNPADPPNIKAANFKDMLPVDVITILNQNIDEL
A0A077B9B3_9ALPH ---------MASDSCAAQSQLGDLRVVFDPSDPTTIRATNFVNIVPADVMAVLNAARPLV
D1FXU7_FHV1 --------------MASE---------FNPADLQTITAANLNGLLPVDIIQSLNRAGRPE
Q6X247_9ALPH --------------MSAP-------AGIDPSAPATITPDTLRDLLPVQILHVLNAASRPL
SCP_VZVD -----------------MTQPASSRVVFDPSNPTTFSVEAIAAYTPVALIRLLNASGPLQ
Q9E1Z3_CHV9D -----------------MTQSTSSRAHFDPSVPGTFSVDAIAANSPVALLQLVNASGPVI
SCP_PSHV1 MSTSSRQQSPAGGDGSTGGGSAAHCSGHAPVNALVEFLRTAPRTHTPEQLQAIARSSIND
:
SCP_HHV11 DNNHPHPQGTQGAVREFLRGQAAALTDLGLAHANNTFTPQPMFAGDAPAAWLRP-----A
SCP_HHV2H DNSYPHPHGTQGAVREFLRGQAAALTDLGVTHANNTFAPQPMFAGDAAAEWLRP-----S
Q805Z3_CHV1 DHTHDHPLGNRAAARNFIRGQAGALADLCRAHANHTLELQPMFSREAPGAWLRP-----A
A0A060Q0V9_9ALPH DHNYDHPLGNHTAVRNFVRGQAGALAHLCHQHANNTFATQPMFSHEAPADWLRP-----A
J9QQS7_9ALPH DRKHDHPQGNNAALVHFLRGQAMALRQLYETGADGTLAVQPMFYGEQHGRWLRP-----A
E2IUD4_SHV1 DAQHPHPRGNAAAAQAYVRGLAGALTQLYNAHANNTLAPQPMFASPDPASWLRP-----T
SCP_GAHVM KIPDTYSKVEQAARINVLRAICVGFAEVRRHNDNRTLQRSTMFAVNDAASRIRP-----S
Q9WSX8_9ALPH QVSDRHSDL-NAAKINVLRALCVGFSDVRRKNDTRTLQRTPMFAIGDAASRLRP-----S
A0A068EVY6_9ALPH EFAGQKTQA--DARGIILKAIALGFATMRHRHDTHTLMRTPMFAMEDGASWARP-----T
A2TIV6_9ALPH NVRQNTVSA---ARLALIRALSAGLTTIRRANDDATLSRYPMFGRTDGASWVRP-----S
SCP_EHV1B DYTKYTEDEISEGLKQLFMGTARTMVSLRQRHLKSLVRRSDMFAQNDASTWARP-----N
SCP_EHV1V DYTKYTEDEISEGLKQLFMGTARTMVSLRQRHLKSLVRRSDMFAQNDASTWARP-----N
A0A077B9B3_9ALPH E--PFDDKTIDEALRQLFMGTARAMVFLRQGHLGALVGRTPMFAEDDAAAWARP-----T
D1FXU7_FHV1 G---ASQAAMLDAKRTLFVGTALSMVALRQRHAQHTINRLPMFAEYDGSYWARP-----T
Q6X247_9ALPH Q-DGTTPEQVSAARRNLLVGTSLAMVDLRRRHEKAVVPRVPMFATYDHAHWARP-----T
SCP_VZVD P---GHRVDIADARSIYTVGAAASAARARANHNANTIRRTAMFAETDPMTWLRP-----T
Q9E1Z3_CHV9D S---GVRFDIGHIRSIYTVGAAAAAARSRVNHNVNTIRRTAMFAETDAMTWLRP-----T
SCP_PSHV1 LSEALRALRTDLPKGDPVRGFLRANTTLALSLLNHAPRLREQLNIQPVAARLTGPQGFWS
. :
SCP_HHV11 FGLRRTYSPFVVREPSTPGTP---------------------------------------
SCP_HHV2H FGLKRTYSPFVVRDPKTPSTP---------------------------------------
Q805Z3_CHV1 FGLRRTYMPFLAAPNNQPAGTP--------------------------------------
A0A060Q0V9_9ALPH FGLRRTFSPFVVREDVVP------------------------------------------
J9QQS7_9ALPH FGLKRTYSPFIVREAGDR------------------------------------------
E2IUD4_SHV1 FGLKRTFSPFTPTAAP--------------------------------------------
SCP_GAHVM IGLKRTFPTGIFSTTIHGSPSDDDISTS--------------------------------
Q9WSX8_9ALPH IGLKRTFPTGIFSTTIINSPADDDA-----------------------------------
A0A068EVY6_9ALPH IGLKRTFPPGLHTTVYEGHRRSEGGPE---------------------------------
A2TIV6_9ALPH FGLKRTFSPRIIRDAPDDQR----------------------------------------
SCP_EHV1B IGLKRTFPPRFMQPISED------------------------------------------
SCP_EHV1V IGLKRTFPPRFMQPISED------------------------------------------
A0A077B9B3_9ALPH IGLKRTFSPRFTQLVVDE------------------------------------------
D1FXU7_FHV1 IGLKRTFSPRLIQVETVED-----------------------------------------
Q6X247_9ALPH IGLKRTFLPRVVQLPLEYEDDAGAASASAART----------------------------
SCP_VZVD VGLKRTFNPRIIRPQPPNPSMSLGISGPTILPQKTQSADQSALQQPAALAFSGSSPQHPP
Q9E1Z3_CHV9D VGLKRTFNPRIVRPQVSVINSQANIIQESTNSVSQQPPPSNQAVHSHVSILPSSTSQHSN
SCP_PSHV1 FGIRQRNRPQILRPPQLSRKK---------------------------------------
.*::: .
SCP_HHV11 ------------------------------------------------------------
SCP_HHV2H ------------------------------------------------------------
Q805Z3_CHV1 ------------------------------------------------------------
A0A060Q0V9_9ALPH ------------------------------------------------------------
J9QQS7_9ALPH ------------------------------------------------------------
E2IUD4_SHV1 ------------------------------------------------------------
SCP_GAHVM ------------------------------------------------------------
Q9WSX8_9ALPH ------------------------------------------------------------
A0A068EVY6_9ALPH ------------------------------------------------------------
A2TIV6_9ALPH ------------------------------------------------------------
SCP_EHV1B ------------------------------------------------------------
SCP_EHV1V ------------------------------------------------------------
A0A077B9B3_9ALPH ------------------------------------------------------------
D1FXU7_FHV1 ------------------------------------------------------------
Q6X247_9ALPH ------------------------------------------------------------
SCP_VZVD PQTTSASVGQQQHVVSGSSGQQPQQGAQSSTVQPTTGSPPAAQGVPQSTPPPTQNTPQGG
Q9E1Z3_CHV9D QVNANIPAQSTQVTAPGQSDQQSGQPAVSAQATVANTGVSAQATVANTSGSQSKAQPASG
SCP_PSHV1 ------------------------------------------------------------
SCP_HHV11 --------------------
SCP_HHV2H --------------------
Q805Z3_CHV1 --------------------
A0A060Q0V9_9ALPH --------------------
J9QQS7_9ALPH --------------------
E2IUD4_SHV1 --------------------
SCP_GAHVM --------------------
Q9WSX8_9ALPH --------------------
A0A068EVY6_9ALPH --------------------
A2TIV6_9ALPH --------------------
SCP_EHV1B --------------------
SCP_EHV1V --------------------
A0A077B9B3_9ALPH --------------------
D1FXU7_FHV1 --------------------
Q6X247_9ALPH --------------------
SCP_VZVD KGQTLSHTGQSGNASRSRRV
Q9E1Z3_CHV9D -GQG------SGTPRSSRRV
SCP_PSHV1 --------------------