HAMAP rule MF_00949
General rule information
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| Accession | MF_00949 |
| Dates | 7-MAR-2013 (Created)
19-NOV-2022 (Last updated, Version 7) |
| Name | Spt4_arch |
| Scope(s) |
Archaea |
| Template(s) | Q57839 (SPT4_METJA); Q8U440 (SPT4_PYRFU); [ Recover all ] |
| Triggered by |
HAMAP; MF_00949 (Get profile general information and statistics) |
Propagated annotation
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Identifier, protein and gene names
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| Identifier | SPT4 |
| Protein name | RecName: Full=Transcription elongation factor Spt4; |
| Gene name | Name=spt4; |
Comments
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| FUNCTION | Stimulates transcription elongation. |
| SUBUNIT | Heterodimer composed of Spt4 and Spt5. |
| SIMILARITY | Belongs to the archaeal Spt4 family. |
Keywords
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| Transcription | |
| Transcription regulation | |
| case <FTGroup:1> | |
| Metal-binding | |
| Zinc | |
| end case | |
Gene Ontology
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| GO:0006355; Biological process:regulation of DNA-templated transcription | |
| case <FTGroup:1> | |
| GO:0008270; Molecular function:zinc ion binding | |
| end case | |
Cross-references
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| Pfam | PF06093; Spt4; 1; |
Features
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| From: SPT4_METJA (Q57839) | ||||||||||||
| Key | From | To | Description | Tag | Condition | FTGroup | ||||||
| BINDING | 4 | 4 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" |
C | 1 | |||||||
| BINDING | 7 | 7 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" |
C | 1 | |||||||
| BINDING | 16 | 16 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" |
C | 1 | |||||||
| BINDING | 19 | 19 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" |
[CH] | 1 | |||||||
Additional information
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| Size range | 58-79 amino acids |
| Related rules |
None |
| Fusion | Nter: None Cter: None |