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HAMAP annotation rule: MF_01310
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General rule information

Accession MF_01310
Dates 26-FEB-2003 (Created)
25-NOV-2009 (Last updated, Version 27)
Data class Protein

case <OC:Bacteria> or <OG:Chloroplast>
Predictors HAMAP; MF_01310_B; [distribution of match scores in UniProtKB];[seed alignment for MF_01310_B]
end case


case <OC:Archaea>
Predictors HAMAP; MF_01310_A; [distribution of match scores in UniProtKB];[seed alignment for MF_01310_A]
end case

Names Ribosomal_S11


Propagated annotation

Identifier, protein and gene names

case <OC:Bacteria> and not <OC:Cyanobacteria>
Identifier RS11
Protein name
RecName: Full=30S ribosomal protein S11;
Gene name rpsK

else case <OC:Cyanobacteria>
Identifier RS11
Protein name
RecName: Full=30S ribosomal protein S11;
Gene name rpsK, rps11

else case <OC:Archaea>
Identifier RS11
Protein name
RecName: Full=30S ribosomal protein S11P;
Gene name rps11p

else case <OG:Chloroplast>
Identifier RR11
Protein name
RecName: Full=30S ribosomal protein S11, chloroplastic;
Gene name rps11
end case

Comments

case <OC:Bacteria>
FUNCTION: Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome (By similarity).
SUBUNIT: Part of the 30S ribosomal subunit. Interacts with proteins S7 and S18. Binds to IF-3 (By similarity).
end case


case <OC:Archaea>
FUNCTION: Located on the platform of the 30S subunit (By similarity).
SUBUNIT: Part of the 30S ribosomal subunit (By similarity).
end case


case <OG:Chloroplast>
SUBUNIT: Part of the 30S ribosomal subunit (By similarity).
SUBCELLULAR LOCATION: Plastid, chloroplast.
end case

SIMILARITY: Belongs to the ribosomal protein S11P family.
Cross-references
Pfam PF00411; Ribosomal_S11; 1;
PROSITE PS00054; RIBOSOMAL_S11; 1;
Keywords
Ribonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding.
Gene Ontology
GO:0019843; Molecular function: rRNA binding.
GO:0006412; Biological process: translation.

case <OG:Chloroplast>
GO:0009507; Cellular component: chloroplast.
end case



Additional information


case <OC:Bacteria>
Size range: 118-150 amino acids
end case


case <OC:Archaea>
Size range: 124-156 amino acids
end case

Related UniRules: None
Template: P0A7R9 (RS11_ECOLI); P80376 (RS11_THET8): [Recover all]
Scope: Bacteria
Archaea
Plastid
Fusion: Nter: None; Cter: None
Duplicate: in LEPBL, PSYIN
Plasmid encoded: None
Comments: ASTLO is a bit short and atypical; CENSY has a long N-terminus, and has not been included in the seed alignment

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UniProtKB rule member sequences