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HAMAP annotation rule: MF_01366
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General rule information

Accession MF_01366
Dates 10-NOV-2006 (Created)
9-FEB-2012 (Last updated, Version 12)
Data class Protein

case <OC:Bacteria> or <OG:Chloroplast>
Predictors HAMAP; MF_01366_B; [distribution of match scores in UniProtKB];[seed alignment for MF_01366_B]
end case


case <OC:Archaea>
Predictors HAMAP; MF_01366_A; [distribution of match scores in UniProtKB];[seed alignment for MF_01366_A]
end case

Names Ribosomal_L13


Propagated annotation

Identifier, protein and gene names

case <OC:Bacteria> and not <OC:Cyanobacteria>
Identifier RL13
Protein name
RecName: Full=50S ribosomal protein L13;
Gene name rplM

else case <OC:Cyanobacteria>
Identifier RL13
Protein name
RecName: Full=50S ribosomal protein L13;
Gene name rplM, rpl13

else case <OC:Archaea>
Identifier RL13
Protein name
RecName: Full=50S ribosomal protein L13P;
Gene name rpl13p

else case <OG:Chloroplast>
Identifier RK13
Protein name
RecName: Full=50S ribosomal protein L13, chloroplastic;
Gene name rpl13
end case

Comments

case not <OG:Chloroplast>
FUNCTION: This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (By similarity).
SUBUNIT: Part of the 50S ribosomal subunit (By similarity).

else
SUBUNIT: Part of the 50S ribosomal subunit (By similarity).
SUBCELLULAR LOCATION: Plastid, chloroplast.
end case

SIMILARITY: Belongs to the ribosomal protein L13P family.
Cross-references
PROSITE PS00783; RIBOSOMAL_L13; 1;
Pfam PF00572; Ribosomal_L13; 1;
TIGRFAMs TIGR01066; RplM_bact; 1;
TIGR01077; L13_A_E; 1;
Keywords
Ribonucleoprotein, Ribosomal protein.
Gene Ontology
GO:0006412; Biological process: translation.

case <OG:Chloroplast>
GO:0009507; Cellular component: chloroplast.
end case



Additional information


case <OC:Bacteria> and not <OC:Cyanobacteria>
Size range: 139-174 amino acids
end case


case <OC:Archaea>
Size range: 136-187 amino acids
end case

Related UniRules: None
Template: P0AA10 (RL13_ECOLI); Q9RXY1 (RL13_DEIRA); P60488 (RL13_THET8): [Recover all]
Scope: Bacteria
Archaea
Plastid
Fusion: Nter: None; Cter: MF_00532 (rpsI)
Duplicate: None
Plasmid encoded: None
Comments: rpl13p is fused with rps9p in METTH

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UniProtKB rule member sequences