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HAMAP annotation rule: MF_01371
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General rule information

Accession MF_01371
Dates 8-JAN-2007 (Created)
9-FEB-2012 (Last updated, Version 9)
Data class Protein

case <OC:Bacteria>
Predictors HAMAP; MF_01371_B; [distribution of match scores in UniProtKB];[seed alignment for MF_01371_B]
end case


case <OC:Archaea>
Predictors HAMAP; MF_01371_A; [distribution of match scores in UniProtKB];[seed alignment for MF_01371_A]
end case

Names Ribosomal_L30


Propagated annotation

Identifier, protein and gene names
Identifier RL30

case <OC:Bacteria>
Protein name
RecName: Full=50S ribosomal protein L30;
Gene name rpmD

else case <OC:Archaea>
Protein name
RecName: Full=50S ribosomal protein L30P;
Gene name rpl30p
end case

Comments
SUBUNIT: Part of the 50S ribosomal subunit (By similarity).
SIMILARITY: Belongs to the ribosomal protein L30P family.
Cross-references
PROSITE PS00634; RIBOSOMAL_L30; 1;
Pfam PF00327; Ribosomal_L30; 1;
TIGRFAMs TIGR01308; RpmD_bact; 1;
TIGR01309; L30P_arch; 1;
Keywords
Ribonucleoprotein, Ribosomal protein.
Gene Ontology
GO:0006412; Biological process: translation.


Additional information


case <OC:Bacteria>
Size range: 53-89 amino acids
end case


case <OC:Archaea>
Size range: 149-185 amino acids
end case

Related UniRules: None
Template: Q9RSL0 (RL30_DEIRA); P0AG51 (RL30_ECOLI); Q5SHQ6 (RL30_THET8); P14121 (RL30_HALMA): [Recover all]
Scope: Bacteria; Acidobacteria
Bacteria; Actinobacteria
Bacteria; Aquificae
Bacteria; Bacteroidetes
Bacteria; Chlorobi
Bacteria; Chloroflexi
Bacteria; Deinococcus-Thermus
Bacteria; Firmicutes
Bacteria; Fusobacteria
Bacteria; Proteobacteria
Bacteria; Spirochaetes
Bacteria; Thermotogae
Archaea
Fusion: Nter: None; Cter: <Unknown>
Duplicate: in LEPBL
Plasmid encoded: None
Comments: Fused with an unknown region in AQUAE. N-terminal extension in RUTMC not taken into account for size range. CENSY, METS5 and NITMS considered atypical. Missing from spinach chloroplast ribosomes, and from Chlamydiae, Cyanobacteria and Planctomycetes.

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UniProtKB rule member sequences