CLUSTAL format seed alignment for MF_01325_A

_____________________________________________________________________________

Features found in the protein:_____________________________________________________________________________

RL3_METAC         ---MASIH--RPKRGSLAFSPRKRAKSHIPRFRAWPEATG-EPKLQSFAGYKVGMTHVIM
RL3_METMA         ---MASIH--RPKRGSLAFSPRKRAKSHIPRFRAWPEATG-EPKLQSFAGYKVGMTHVIM
RL3_METH6         ---MATIH--RPRRGSLAFSPRKRAKSQVPRTRYWAAGEE-KARMDGFAGYKAGMTHIIM
RL3_HALSA         ---MPQPN--RPRKGSMGFSPRKRAESEVPRFNSWPADDG-EVGLQGFAGYKAGMTHVVL
RL3_HALMA         ---MPQPS--RPRKGSLGFGPRKRSTSETPRFNSWPSDDG-QPGVQGFAGYKAGMTHVVL
RL3_ARCFU         ----MKYH--RPRRGSLAFSPRKRAKSIVPRIRAWPECD--RVRMQGFAGYKAGMTHVVM
RL3_METJA         --MGLNIN--RPRRGSLAFSPRKRAKRPVPRIRSWPEED--TVRLQAFPVYKAGMSHAFI
RL3_METVA         --MGMKKN--RPRRGSLAFSPRKRAKKLVPKIRSWPADK--KVGLQAFPVYKAGTTHALL
RL3_METTH         ---MARHH--QPRKGSVAFSPRKRAARETPRVKSWPQVD--EPGLLALAGYKAGMTHVMM
RL3_METKA         MGRGGRRNPGRPRRGSLAFSPRKRASRPVPRIRSWPDEE--RVRVQGFAGYKAGMTHAIM
RL3_THEAC         ---MATPH--HSRRGSMAYYPRVRAKSVDPKIRSWPEIKG-EVKVQGFAGFKVGMTHVEM
RL3_THEVO         ---MATPH--HSRRGSMAYYPRVRAKSIEPRIRSWPEISG-PVKVQGFAGFKVGMTHVEM
RL3_SACS2         ---MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSQNPKLLGFVGYKVGMTHVFM
RL3_SULTO         ---MGHRKLASPRRGSAGVRPRKRASEILPTPRSWPTIQSNEPKLLGFVGYKVGMSHIFM
RL3_AERPE         ---MGARKKRAPRRGSLGFSPRKRASRLVPRVKRWPEVDIGKPVPLAFLGYRAGMTHVFM
RL3_PYRAE         ---MGL-KINRPRRGSMGVYPRKRAADIVPRVRTWPEVNLGKPALLGFAAYKAGMLHAVV
RL3_PYRAB         ---MGKVH--RPRRGSLAFSPRKRAKSIVPRIRSWPKET--EVRMLGFAGYKAGMTHILM
RL3_PYRHO         ---MGKIH--RPRKGSLAFSPRKRAKSIVPRIRSWPKET--EVRMLGFAGYKAGMTHILM
RL3_PYRFU         ---MGKVH--RPRRGSLGFSPRKRAKSIVPRIRSWPKET--EVRMLGFAGYKAGMTHILM
RL3_NANEQ         ---MPQHGRHAPRRGSMGFWPRKRASRIYPRIKTWPKIE--EIKPLAFAAYKVGMTHTIL
A9A5J4_NITMS      ---MGARKRHSPRRGSLAYSPRVRAKSMEARIRAWPKLDSEEPKILAHCGFKAGCVQIVS
                             .::** .  ** *:    .  . *.          .   ::.*  :   

RL3_METAC         VDDTKNSLTQGMEISVPVTVIETPAIRVAAIRAYAEDS-T-GEKAIAEVWAADLDP----
RL3_METMA         VDDIKNSLTQGMEISVPVTVIETPAIRVAAVRAYTEDS-T-GEKAIAEAWAADLDS----
RL3_METH6         IDDKPNSLTEGMEISVPVTILETPPLSIAALRVYEKYN-G-GVRAAGEAWSDKLDP----
RL3_HALSA         VDDKANAPTEGMETTVPVTVVETPPMRAAAVRLYEDTP-Y-GKKPLTEVWADDTHE----
RL3_HALMA         VNDEPNSPREGMEETVPVTVIETPPMRAVALRAYEDTP-Y-GQRPLTEVWTDEFHS----
RL3_ARCFU         IDDRKNSPTYGEEVVVPVTVIETPPMKVAAVRVYKKTQ-Y-GMQIAAEVWSNNLDD----
RL3_METJA         KEDNPKSPNAGQEVFTPITILEAPPINVCAIRVYGRNE-RNYLTTLTEVWADNLDK----
RL3_METVA         VENNPKSPNNGQEVFSPVTVLETPEITVAGIRAYGKTT-K-GLKALTEVWAKQQDK----
RL3_METTH         VDNQKNSPTEGMEVSTPVTILEVPPLTVMAVRTYEKTS-R-GLKTLGEVLATETKD----
RL3_METKA         IDDWPNSPTEGEEISVPVTILDAPPMYVAAIRAYAPTP-D-GYRCVTEAWAEIPEEL---
RL3_THEAC         IDYRKKSVTAGQPILVPVTVVEVPPLDVVGYRLYDEDA-EGNLVVVFEAWAKDLDK----
RL3_THEVO         VDYRKTSVTAGQPIFVPVTVIEVPPLDVIGIRLYDEDE-EGNMVVVYEKWTQNLDK----
RL3_SACS2         IDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAIDG-KGEPNVITEYWSSSSLQFL--
RL3_SULTO         IDDKPTSPNYGKEIYVPVSVIETPPVIPLAIRAYVMGP-KGEPTTLTEYWGDISEDLL--
RL3_AERPE         VDDRPGRPTSGKEIFVPVTIVETPPMFVAAVRLYGYDP-NRGRYSLGEAWAQPPPE-L--
RL3_PYRAE         VDDRPTSPLYGKEVVKAVTVLDAPPLYVWGFRLYTLDPTNGYKRAVAEVWASELPK----
RL3_PYRAB         IDDEP-GLTNGKEIFMPVTIIETPPLRVFGIRAYRQGYLGLETATEVIVPDFELDNYV--
RL3_PYRHO         IDDEP-GLTNGKEIFMPVTIIETPPLRVFGIRAYRQGYLGLETAGEVIVPDFELDNYTP-
RL3_PYRFU         IDDEP-GLTNGKEIFMPVTIIETPPLRVFGIRAYRMGYLGLETATEVIVPDFPLDNYPAK
RL3_NANEQ         -------NINGERVFTPVTVLEAPELLVIGAKAYKKEN--GALKEISSLYFNDLPQ----
A9A5J4_NITMS      IDDREKVPNAGKQLVSLGTVLVTPPVLILGIRGYSKDH--DGLHAEFDVYAEDIPK----
                            *       ::: .* :   . : *                          

RL3_METAC         --------------ELKRRIPIPAAG-NQAE-----------ALENIGKLIEEGRVSDVR
RL3_METMA         --------------ELKRRIPIPAAG-NQAE-----------GLENIGKLIEEGRVSDIR
RL3_METH6         --------------SLARSITVPK-N-KRGA-----------AIDEIGAIIED--MEELR
RL3_HALSA         --------------SLDRTLSVPDE----GG-----------DTDELIEALDTEEIADIR
RL3_HALMA         --------------ELDRTLDVPEDH-DPDA-----------AEEQIRDAHEAGDLGDLR
RL3_ARCFU         --------------FLDRRLNLPK----KEP-----------DVEKLKAAVENG-ASEVR
RL3_METJA         --------------ELERKIKLPKKE--DRK-----------TVEDLEALKDK--IEDVR
RL3_METVA         --------------ELGRKLTVTKKE--EIK-----------TVESLDAVLEK--TVDLR
RL3_METTH         --------------DLRRKLTPPADDYDQEA-----------AIEKIRSNMEY--VADVR
RL3_METKA         --------------EMDRVFTVPKDG--EAG-----------DLDKIEELVDEGIVEEIR
RL3_THEAC         --------------EIFRKIPEIKKV-------------------AERDPPES--YEDVR
RL3_THEVO         --------------ELFKKITTFKEV-------------------KEKPVPET--YADVR
RL3_SACS2         --------------DITRRIHSISSFLKDDESKKKFDERFNTKLDLIKSNLDR--IVYFR
RL3_SULTO         --------------KLIQQ-RKVTRLKIDKE-------KMKGKLDEINNKLND--ILYLR
RL3_AERPE         --------------ELQRRISTLGSFDTDKM------------LKSLEERLDK--AEDVR
RL3_PYRAE         --------------FLHRVLTLPEKLDVDKQ------------LKKVEEFRDV--AVDVR
RL3_PYRAB         SKKAKGR-KFTFYQLLKRRIATLPKNYTKDD--------FEQKLGNLEDMIKEGEIVEVR
RL3_PYRHO         SKKGKGR-KFTFYQFLGRRIATLPKDYTQEE--------FEQKLGALEDMIKEGEIVEVR
RL3_PYRFU         ERKGKPKPKMTFYKLLERRIATLPKNYTQEM--------FEQKLGQLEDMIKEGEIVDVR
RL3_NANEQ         --------------YVFRKIPKLKNYNFEEK------------KEQFLSKADN--ADEVK
A9A5J4_NITMS      --------------SIAKEISLKNKQ-----------------ENALDNAEKSLKKIKEI
                                 : :                                 .        

RL3_METAC         AVIYTLPKSLTGVPKKVPDIMESGIS-ARDLGTKFEYSKTIL--GTLVSVTDVFKNGTLV
RL3_METMA         AVTYTLPKSLTGVPKKVPDIMESGIS-AKDLGAKFEYAKSIL--GNLVNVTDVFKNGTVV
RL3_METH6         LIAHTNPKLLTGVPKKNPDLMEIQVN-GGNIANQFELAKSLL--GSSVPISSIFSPGSII
RL3_HALSA         VITHTVPGDTAGVPKKNPDVMETRVG-GGTLADRLEFAADLIEDGGVHAFGDVFRAGEFT
RL3_HALMA         LITHTVPDAVPSVPKKKPDVMETRVG-GGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYA
RL3_ARCFU         VVTYTQPYLITGVPKKVPDVMEHRI--GGNVEEALDYAISKL--GKEISVSEVFDEGAII
RL3_METJA         VLVHTNPK-LTCLPKKKPEILEIRIG-GKDIEERLNYAKEIL--GKQLNITDVFQEGELV
RL3_METVA         VIVHTNPK-TTGIPKKKPEVVEIRVG-GSSVAEKLAYAKDIL--GKTLSINDVFETGEFI
RL3_METTH         VIVHTNPR-LASVPKKKPEVFECGLG-GKTPEEKFEYALEIL--GKDVRASEIFSEGAFV
RL3_METKA         VIVATQPK-KAGVPKKKPDVMEYRIG-GKDVRERFEYAVEIL--SEEIRAKDVFDEGEIV
RL3_THEAC         IIVATRNKDVPGIPSKKPEIFELRIGGGNSVKERLEYAKNHL--GKQITFTDFSKPGKFV
RL3_THEVO         LIVATRNKDVPGIPSKKPEIFELRIGGGNSVKERFEYATAHL--GKTIRFEDFSKPGKFV
RL3_SACS2         LLVSTQPRKIPSLGKKAPDLVEIQIGG-GEKKSQLDYALNIL--GKEITIRDVFKEGQLI
RL3_SULTO         VLIATQPKLVPSLGKKKPEIVEVQVGG-GDIKSQLNYVLNIL--GKPLSVKDVFKEGQLI
RL3_AERPE         LIAASQPKLAGGLSKKKPDLLEIKVGGVSDVTKLFDYAKDVL--GNLIAVNDVFEEGQLV
RL3_PYRAE         ALVATQPH-LSGIGKKTPELLEIPIGGVPSVDERINFAISLL--GKTVSPKDVFTPGQLV
RL3_PYRAB         ALVATQPWVIKLK--KKPEVMEYAIG-GTSVEEKFNYIKEKL--GKELRVGEVLKEGELL
RL3_PYRHO         ALVSTQPWVIKLK--KKPEVMEYAIG-GTSVEEKFNYIKEKL--GKEIRVGEVLKEGELL
RL3_PYRFU         AIVATQPWVIKLK--KKPEVMEYAIG-GTSVEEKFNYIKEKL--GKELRVGEVLKEGELL
RL3_NANEQ         IIVSTQPW--KIKLKKTPEIFDIPIG-GSDVNKKLEYALSLL--GKELSINDVFKEGQYV
A9A5J4_NITMS      FAIVAISPSAAGLEQKKPYIFEASVS-GGDIPKQFAHVKELL--GKEIKIDQIFETGASV
                      :          * * :.:  :         :      :  .      ..   *   

RL3_METAC         DTAAITIGKGTQGPVKRWGIQLMKGKHSRQGSLRQVGTLGAFNPSRVSWRVPQMGQMGYH
RL3_METMA         DTAAITIGKGTQGPVKRWGIQLQKGKHSRQGSLRQIGTLGSFNPSRVSWRVPQMGQMGYH
RL3_METH6         DVSAITKGKGVQGPVKRWGINLQKRKHSRGGKRRHIGNLGPWNPHHVRWTVPLLGQMGYH
RL3_HALSA         DAAGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYH
RL3_HALMA         DVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYH
RL3_ARCFU         DVIAVTKGKGFQGPVKRWGVITLDAKHARSSKHRRVGNLGPWNPHHVRWTVPQAGQMGFH
RL3_METJA         DTIGVTKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQPKMVMWSVPMPGQMGYH
RL3_METVA         DTLAVTKGKGFQGPVKRWGVKIQFGKHQRKGVGRQTGSIGPWRPKRVMWTVPLAGQMGFH
RL3_METTH         DAIAVTKGKGFQGPVKRWGIRIQYGKAARSSKGRHIGSLGPWTPSRTMWTVPQAGQMGYH
RL3_METKA         DVSAITKGKGFQGVVKRWGVTIQDRKTQRKQKGRHIGSIGPITPSRVRWTVPMAGQVGYH
RL3_THEAC         DVVSITKGKGFTGHVKRFGVKLLPRKNRK--HRRMIGTLGPWHPDWVRNTVPQAGQMGFQ
RL3_THEVO         DVLSVTKGKGFTGHVQRFGVKLLPRKNRK--HRRMIGTLGPWHPDWVRNTVPQAGQMGYQ
RL3_SACS2         DVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGPS-LGTPSYT-PQPGQLGFH
RL3_SULTO         DIIGVTKGKGFQGVVKRYGVVELPRWHKHRKGSRKVGARGPS-FSTPSYV-PQPGQMGYH
RL3_AERPE         DVIAVTKGKGFQGVIKRWGVKELPRWHKHRKGSRRIGARSHG-RSTFWET-PQAGQTGFH
RL3_PYRAE         DVIAVTKGKGYQGVIKRFGVTILPRWHKHRKGHRRTGTIGPQ-APAVMFTQPRPGQMGFH
RL3_PYRAB         DVIAVTKGKGTQGPVKRWGIKL--RAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFH
RL3_PYRHO         DVIAVTKGKGTQGPVKRWGIKL--RAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFH
RL3_PYRFU         DVIAVTKGKGTQGPVKRWGIKL--RAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFH
RL3_NANEQ         DVIAVTKGKGFQGVIKRFHVHR--RQHKSEKGVRKVGAIGSRGPGRIFPTVPMPGQMGYH
A9A5J4_NITMS      DVAAITKGKGWQGVLKRWNVKK--KQHKSRKTVREVGSLGPISPQSVMYTVPRAGQFGFH
                  *  .:* ***  * ::*: :             *  *  .           *  ** *::

RL3_METAC         QRTEFNKRILKIGS------DGE---EVTPEGGFINYGLVRGDYILIKGSVPGPSKRLIR
RL3_METMA         QRTEFNKRILKIGS------DGE---EVTPEGGFINYGLVRGDYVLIKGSVPGPSKRLIR
RL3_METH6         QRTEFNKRVLAIGS------DGG---AITPDGGFPGYGIIRGEYAILSGSVPGPSKRLVR
RL3_HALSA         QRTELNKRLIDIN-------DGD---EPTPDGGFPNYGEVDGPYTLVKGSVPGPEQRLVR
RL3_HALMA         QRTELNKRLIDIG-------EGD---EPTVDGGFVNYGEVDGPYTLVKGSVPGPDKRLVR
RL3_ARCFU         QRTEYNKRLIKIGE------NGE---EITPKGGFLHYGVIRTQYVLVTGSVPGPVKRLIR
RL3_METJA         QRTEYNKRILKIG------NNGD---EITPKGGFLHYGVIRNNYVVLKGSVQGPAKRLIV
RL3_METVA         QRTEYNKRILKLG------SEGA---EITPKGGFLNYGAVKNGYVVVKGTVQGPAKRLVV
RL3_METTH         RRTEYNKQILKIGDA----SEAD---LVNPDGGFVRYGLVRNDYVMIKGSVPGPTKRLVV
RL3_METKA         QRTEHNKRILKIG------EDGE---EVTPRGGFVNYGVVRGDYIMIHGTVPGPKKRLIR
RL3_THEAC         QRTISNVRVIKYGNK----EEVD---SINVRGGFLHYGFVKNDYVLLFGSIPGASKRLIK
RL3_THEVO         QRTISNVRVLKYSKG----EDAD---TINVRGGFLHYGLVKNDYVLLFGSVPGPAKRLIK
RL3_SACS2         RRTEYNKRIIKIGD------EPK---EINPAGGFVRYGIVRNTYVLLEGSILGSKKRPIF
RL3_SULTO         RRTEYNKRILKISD------DPN---EINPKGGFVNYGIVRNTYLIIEGSIIGAKKRPLF
RL3_AERPE         RRTEYNKRILMIDD------DGY---KVTPAGGFLRYGVVRSTFVMLSGSIPGTPKRPIV
RL3_PYRAE         QRTEYNKRLLKIGE------NGA---EITPKSGFPHYGVVKGPYILIQGSVPGARKRLVV
RL3_PYRAB         HRTELNKRLIAIGENGKLVIDGN-EIEITPKGGFPHYGIVRSDFMMIAGSVPGAIKRIIR
RL3_PYRHO         HRTELNKRLIAIGENGKLVIDGN-EIEITPKGGFPHYGIVRGDFMMIAGSVPGAIKRIIR
RL3_PYRFU         HRTELNKRLIAIGENGKLKLDENTEIEITPKGGFPHYGIVRSDFMMIAGSVPGAIKRIIR
RL3_NANEQ         RRTEYNKLIIKIGE------------PLNVEGGWVRYGQVIGPTILLKGSVPGPRKRLII
A9A5J4_NITMS      QRVEYDKRIMIMGNTD----DDK--LKINPDGGFKHFGLVKGDFIVLKGSVPGAYRRLIK
                  :*.  :  ::  .               .  .*:  :* :     :: *:: *. :* : 

RL3_METAC         LRDPIRA----KKADLGEPNILYISRESKQG--------------------
RL3_METMA         LRDPIRA----KKADLGEPNILYISRESKQG--------------------
RL3_METH6         MRSAVRA----KDADLKTPQVLYVSRDSKQGL-------------------
RL3_HALSA         FRPAVRP----NESPRLDPEVRYVSTASNQG--------------------
RL3_HALMA         FRPAVRP----NDQPRLDPEVRYVSNESNQG--------------------
RL3_ARCFU         MRDAIRP----PKAHFDGVNIVYVSTTSKQGR-------------------
RL3_METJA         LRRAIRP----QEPLIKVPEITYISTTSKQGK-------------------
RL3_METVA         LRGAVRP----AEDKFGLPEVTYISKESKQGN-------------------
RL3_METTH         LRKAIRA----AGKQEEAPQINYISTASKQGV-------------------
RL3_METKA         VRPAVRPP---KNAPEGAPEILYISRTSQQGVRPKASEDEIVEQLGGPASA
RL3_THEAC         MRDPARQ----KVPDIEEVKLEYISLESKQGD-------------------
RL3_THEVO         MRDPARQ----KVPDIDNVKLDYISLESKQGD-------------------
RL3_SACS2         LREPVRPS--YVFENP--PKITYVNLLSQQG--------------------
RL3_SULTO         LRYPIRPS--WIPQSA--PKITYVNLYSQQG--------------------
RL3_AERPE         MRWAIRPPEWYLKLGVRKPEITYISLASKQGV-------------------
RL3_PYRAE         LRHPVRPP--RKAPPAAEPQVVWVSSQTL----------------------
RL3_PYRAB         VRPAIRPP--KKKPPVQRPQITYVSVESKQ---------------------
RL3_PYRHO         VRPAIRPP--KKKPPVQRPQITYVSVESKQ---------------------
RL3_PYRFU         VRPAIRPP--KKKPPVQRPQITYVSVESKQ---------------------
RL3_NANEQ         LREAIRPP----RKQEKVEGIEYISLSPKN---------------------
A9A5J4_NITMS      LRSQIRNV----PDKVNKPNILEVVV-------------------------
                  .*   *              :  :