CLUSTAL format seed alignment for MF_01888
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Features found in the protein:
- The following colors are used to highlight features:
- blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
- magenta is used to display DISULFID, THIOLEST and THIOETH.
- red is used for all other features, such as INIT_MET, ACTIVE SITE,
METAL,BINDING, NP_BIND, SITE, REGION, etc.
- The ID of the sequence used as the template for feature propagation is
underlined.
- A '<' at the beginning of a sequence or '>' at the end indicate that
the protein is fused with another domain either at the N- or C-terminus.
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RRAB_ECOLI -------MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEA
RRAB_SHIFL -------MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEA
RRAB_ECO57 -------MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEA
RRAB_SALTY -------MANPELLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDFETLEKAAVEA
RRAB_SALTI -------MANPELLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDFETLEKAAVEA
RRAB_CROTZ -------MANPELLEEQREETRLIIEELLEDGSDPEALYTIEHHFSADDFDTLEKLAVEV
RRAB_PANAM -------MAFEALLEEQREETRLIIEELLEDGSDPDALYTIEHHLSCNNFDSLEKAAVDA
RRAB_PROMH -------MADSKELAEQREETRLIIEELLEDGSDPDALYAIEHHISCENFETLEKAAVEV
RRAB_SODGM -------MAHS-FLDEQREETRLIIDELLEDGSDPEALYTIEHHLSADDFDTLEKVAVEA
RRAB_XENNA -------MADPHVLEEQFEETRSIIEELLEDGSDPDATYIIEHHFSAEDFDQLEKAAVEA
RRAB_HAEIN ----------MSKLAELQAETREIIEDLLNDGSEPNALYIIEHHIAHHDFDLLEKIAVDA
RRAB_ACTSZ --------MTHATPQELQAETREIIENLLNDGSDPNALYIIEHHIAHYDFDKLEKIAVDA
RRAB_HAEDU ----------MYDLTALRQQTDEIIDNLLKDGSDPEALHIIEHHIAHHDFDKLEKLVVDA
RRAB_ALIFM MSQEDEYLSVEQFLELQKAETREIIESLKADGSEPDALYAIEHHLMAEDFKALENAVVEA
RRAB_PHOPR -------MSYAELIEEQKEETRDIIAALLEDGSEPEALYTIEHHFSADTFAELEAAAVEA
RRAB_SHESH -------MSIDRLLKAQKQENLEIVTAILDDGSKPDAEYTIEHHFSSTNFDRLEKAAVDA
RRAB_SHEDO -------MSMERQLKEQFAENREIVEALLGDGSDADSEYVIEHHFSSTNFDKLEKAAVDA
RRAB_SHEAM -------MSIERLLKAQQEETRDIVQSLLDDGSDPDAEYMIEHHFSSTNFDRLEKAAVDA
RRAB_AERHH -------MSLDMQ--EWREETTAIVNELLADGSNPDLEYEIEHHFACQDFDLLEKAAVDL
RRAB_AERS4 -------MSLDMQ--EWRAETTAIVNELLADGSNPDLEYDIEHHFACQDFDQLEKAAVDL
RRAB_ALTMD ------MNQFDERE-EWYAFNQETIDALLEDGSQADADYTIEHHFASTDFDVLEKAAVDA
RRAB_PSEA6 -------MSTEEQA-EWFEFNQETVEALIEDGSDSTKPHTIEYHFAGDDFDVLEKAAVDA
RRAB_PSYIN ---MEKALSLEELLAEYREETEEIVEAILEDGSNPDAVYMIEHHLSCTDFDVLEKAAIAC
RRAB_COLP3 --------MIDEELQQWFSHTEMLIAELLEDGTNDEVYHTIEHHFASSDFDLLEKAAIAA
RRAB_PSET1 -------------MENWREISEDIVSSLLEDGSDPEILYEVEHHFVCEDFPKLEQAALAA
RRAB_IDILO ---------MSRDLNDLLTQSEETVQALIADGAETELLYEIEHHLASQDFTKLEKAAVEL
. : : **:. : :*:*: : ** .:
RRAB_ECOLI FKLGYEVTDPEELEV--EDG-DIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDG
RRAB_SHIFL FKLGYEVTDPEELEV--EDG-DIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDG
RRAB_ECO57 FKLGYEVTDPEELEV--EDG-DIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDG
RRAB_SALTY FKLGYEVTEPEELEV--EEG-DTVICCDILSECALNAELIDAQVEQLMNLAEKYDVEYDG
RRAB_SALTI FKLGYEVTEPEELEV--EEG-DTVICCDILSECALNAELIDAQVEQLMNLAEKYDVEYDG
RRAB_CROTZ FKLGYEVTDPEELEL--EEGGETVICCDALSECALNAELIDAQVEQLMNMAEKFNVEYDG
RRAB_PANAM FKLGYEVTEPEELEL--EDG-TTVMCVDILSEGALKAELIDAQVEQLVNLVAKYNVDYDG
RRAB_PROMH FKLGYEVTEPEEIEI--ESG-EILVCFDAVSESGLNAELIDAQVEQLMNLAEKMGVYYDG
RRAB_SODGM FKLGYEVTDAEELEV--EGG-EKLMCCDAVSEIALQAELIDAQVEQLFTLTQRLEVNYDG
RRAB_XENNA FKLGYEVTDAEELET--EDR-VILMCCDVISESRLEVDLINAQVKQLADLAEKMGVNYDG
RRAB_HAEIN FKAGYEVSEAEEFKD--DDG-KPIFCFDIISEVELKAEIIDAQQKEILPLLEKHNGIYDG
RRAB_ACTSZ FKAGYEVSDAEELED--DNG-KPLYCFDIVAEVELKAEIIDAQQQQLVPLVAKHGGIYDG
RRAB_HAEDU YKLGYEISEAEEIED--DQG-NVLFVCDIVSEVKLNGDIITAQQQELLPLIEKAAAEYEG
RRAB_ALIFM FKMGFEVLEAEELE---DEDGAKILCCDAVMDSALDAEVIDAQVEKLVNLAEKYDIIYDG
RRAB_PHOPR FKMGFEVLEAEELELAPEDGGGKVVCFDAVMESALNAELIDEQTEKLIALADKHDIDYDG
RRAB_SHESH FKAGFEVNDAEEMEL--EDG-SVIFCFDAIAHHKLEVEMLDKACEALLVLAAKQKVDYDG
RRAB_SHEDO FKLGFEVNDAEEMEL--EDG-SEIFCFDAIANHKLDVALLDKACEQLMQVAHKQKVDYDG
RRAB_SHEAM FKLGFEVTDAEELEL--DDG-SVILCFDAIANHALDVDLIDKACEQLINLAAKQKVDYDG
RRAB_AERHH FKAGFEVTDAEEMEL--DDG-ATIFCFDATTECKLDIETIVADIAKMLPILEKYGVDYDG
RRAB_AERS4 FKAGFEVTDAEEMEL--DDG-APIFCFDATIERKLDIETIVADIEKMLPILKKYGVDYDG
RRAB_ALTMD FKAGFEVTDAEELML--DDG-ETIFCFDAVVERKLDIEKLNADADALLKIADKHDVTYDG
RRAB_PSEA6 FKAGFEVGDAEELML--DDG-GTIFCFDAVVERLLDVDLINADTVKLLAIAQKQNVQFDG
RRAB_PSYIN FKKGYEVTDPEECEL--EDG-SIILSFDVTVEMNLDEEAIMEDIEKLVVLAQSFSIDYDG
RRAB_COLP3 FKLGLEIEEPEEAEL--ENG-DKVFAFDIATEQMLDVNLIKKETQAMFELAKQCGVDYDG
RRAB_PSET1 FKLGYDVEEPAELEL--EDG-AKIWSFDIVVESELDVDVIMEDVDKLAALAVECEVEYDG
RRAB_IDILO VKQGYHVDDADEFED--ERG-KRWFAFMAVTDAELDNDILNRQVREIAAIADECEVEYDG
* * .: :. * : . *. : : : ::*
RRAB_ECOLI WGTYFEDPNGE-DGDDE---DFVDE-----------DDD-----GVRH-
RRAB_SHIFL WGTYFEDPNGE-DGDDE---DFVDE-----------DDD-----GVRH-
RRAB_ECO57 WGTYFEDPNGE-DGDDE---DFVDE-----------DDD-----GVRH-
RRAB_SALTY WGTYFEDPNGE-EGDDD---DYVDE-----------DDD-----GVRH-
RRAB_SALTI WGTYFEDPNGE-EGDDD---DYVDE-----------DDD-----GVRH-
RRAB_CROTZ WGTYFEDPDGEGEDEDD---EGMDE-----------DDD-----GVRH-
RRAB_PANAM WGTYFEDPNAQDDDEDDG--EAIDE-----------DDN-----GIRH-
RRAB_PROMH WGTYFEDPDAEYDDEDGENEDDESE-----------SDK-----SSRLH
RRAB_SODGM WGTYFEDPDGEEEEGDEFDQDDEDG-----------PADRDEVPATRH-
RRAB_XENNA WGTYFEDPNAPDDEDDND--DLFPP-----------EED-----EPRLH
RRAB_HAEIN WGTYFEDPNADDDEYGDDGEFLDDEDEYGDDGEFFDDEDEE---EPRVH
RRAB_ACTSZ WGTYFEDPNADEDEYGEDGEFFDDE---------FADDDEK---R----
RRAB_HAEDU WGTYFEDPNAEEDEYGDDGEFFDDE----------DEADFN---NAKVH
RRAB_ALIFM WGTYYEG-EDAEYDVIE------DG-----------DED----------
RRAB_PHOPR WGTYFESDEDDEEDESE------DK-----------PEA----------
RRAB_SHESH WGTFFIDEDGNEYIDDDEYVDDDEEFEEKPVH-----------------
RRAB_SHEDO WGTYFIG---------DEIEEDDE--EEQA-------------------
RRAB_SHEAM WGTYFMGDDED---FDDEDDDEDYDKDGFPIERH---------------
RRAB_AERHH WGTYFQE------------------------------------------
RRAB_AERS4 WGTYFQE------------------------------------------
RRAB_ALTMD WGTYFEPREEGEYEEEEHHLND---------------------------
RRAB_PSEA6 WGTYFIES-----------------------------------------
RRAB_PSYIN WGTYPEE------------------------------------------
RRAB_COLP3 WGTYFEE------------------------------------------
RRAB_PSET1 WGTYFQE------------------------------------------
RRAB_IDILO WGTLIEDEELDDEDLDDGEE-----------------------------
***