CLUSTAL format seed alignment for MF_00024
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Features found in the protein:
- The following colors are used to highlight features:
- blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
- magenta is used to display DISULFID, THIOLEST and THIOETH.
- red is used for all other features, such as INIT_MET, ACTIVE SITE,
METAL,BINDING, NP_BIND, SITE, REGION, etc.
- The ID of the sequence used as the template for feature propagation is
underlined.
- A '<' at the beginning of a sequence or '>' at the end indicate that
the protein is fused with another domain either at the N- or C-terminus.
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COBD_THEVO ------------MIVVLIGALSIDIIFGEP----KEYIHPVVFSGRVASAIEGYFRKFDN
COBD_THEAC ------------MIIILIGAIAIDIIFGEP----KEYIHPVVFSGKVSKRIETYFRHHDN
COBD_METJA ----------MLNPIILFLAIIFDRIIGEL----PESIHPTVWIGKLIAFLENIFKSTNC
COBD_METTH ----------MSEVSVLLLAVILDLLIGEP----PHRLHPVVWMGSAVEWMRNILGNSR-
COBD_ARCFU ---------MGIEVVVLLTTLMLDAAVGEP----PALLHPVVWYGKLISLLERAKFRKM-
COBD_PYRHO -------------MYELILALGWDLLLGEP----PAVVHPVVWFGKLIAFIDSHYSRRSP
COBD_CLOAB -------------MLDIIIAVIIDWIIGDP----YWFPHPVIYIGKLIKMLEKLGRRFFK
CBIB_SALTY -----------MTILAWCIAWVLDFIIGDP----QHWPHPVRWIGRLITFVQRIVRRYCP
COBD_SYNY3 MMAVDPNLFPLIAVIILGGSALLDFLLGDP----KSWRHPVEFIGSVINFASQLIIRKVN
COBD_SINSX --------MSETILLILALALVIDRVVGDPDWLWARVPHPVVFFGKAIGFFDARLNREDL
COBD_RHOCA ----------MNFAAMMVVAIGIDLALGWPDALYKRIGHPVTWIARLIARLEKGWN---F
COBD_MYCTU ----MFASTWQTRAVGVLIGCLLDVVFGDP-----KRGHPVALFGRAAAKLEQITYR---
COBD_AERPE -------MFEWLARALYPEPEVLAAGLAVGLMLDLAYPEHRGLALKLHPVHTSYIMALRL
.. .
COBD_THEVO R------FRAGILFSIAVIVLTAIPYFLAVYLSSFILVVYVVVSMVILKTTFSITSMGEH
COBD_THEAC R------IVYGSIFAVAVIVITAIPYFLAIYVSSFVLVIYVIVSMVILKTTFSISAMGDH
COBD_METJA KNKYRDFLFGSLTTFITLLVVGVIAFFVDKCIMLLPFPLNYIIYGFLLSTTIGYKSLFEF
COBD_METTH -----------ISGIILTIAVAAPFTLPLFLINHLQDPLNLIISSILLSAVISIRMLVTS
COBD_ARCFU -------LVEIFYGAFCCLIVITFALILSLLPF--PYPLNFLWAVYLLFSSISVKSMVNH
COBD_PYRHO -------AIDFLAGLFATLVVLSFAFLLSILPLYAPYPLNYLLSVYLLKSSFAIRSLYEH
COBD_CLOAB QDK-WLLVFGGFIVIIVSSISFLIPFIILQGVKKFQVIY-HVINIFFLWTVLAAKSLHKE
CBIB_SALTY GDK-ALRIGGGVMWVVVVGATWGVAWGVLALAQRIHPWFGWSVEVWMIFTTLAGRSLAHA
COBD_SYNY3 DKN-SRRLWGIFLGLKIIISSGFLAWLIVYLAEKVSPVLAVIIQIIGVASCFAGHSLAQA
COBD_SINSX EDS-ARKFRGVVAILLLLGISAWFGHLLHRLF-AVLGPLGFLLEAVLVAVFLAQKSLADH
COBD_RHOCA KGR-LRRLRGVLVALAVIGTTVVIA-LAVQLW-LPAGWPGVLIGGILAWPFVALRSMHDH
COBD_MYCTU ----DGRVAGAVHVGLLVGAVGLLGAALQRLP-GRS--WPVAATATATWAALGGTSLART
COBD_AERPE VRPGAGRAWGAAIWLLTISSHMMVYASLLAASYLVHPALHTLAVGVIVKLSMPLRLLLDT
. :
COBD_THEVO IKLITDSLKKGNIMEARMHLSMIVRRDTSRLNENEISSAAIESIAEGLVDGYITPLFFFV
COBD_THEAC IRLVVESLKNGNISDARVYLSRVVRRDTSNLNENEISSAAIETIAEGLVDGYMTPLFFFI
COBD_METJA CKKPIEYIKNGDLEGARKAVQHIVSRDASKLDKEHVLSAAVESLSENITDSIIGALFYAI
COBD_METTH ALEVGGSLKE-DIEDARRKLSMLVSRDTTSLSDEQITSAAIETLTENITDSVTAPIFYFI
COBD_ARCFU ARVCV----ESGVD--RKAVQMIVSRNTEELSEEQLCSAVIESVAENYVDGVVAPLFYFS
COBD_PYRHO VRRTM----KDDVEEMRKEVSMIVSRDTSKLGREHLISASIESLAENTNDSVVAPLFYYL
COBD_CLOAB GKKVYTALEKKDIEDARLKLSYIVGRQTEGLSKKEIIRADVETIAENSSDGIIAPLLFAM
CBIB_SALTY AQEVERPLRKNDLAESRIKLSWIVGRDTSQLQPAQINRAVVETVAENTVDGIIAPLFFLF
COBD_SYNY3 AQSVIEPLKAGDLPTARQKLALFVGRDTNNLSEREILRATVESVAENTVDGVTSPLFYAL
COBD_SINSX VRRVAGGLRQGGLEGGRAAVSMIVGRDPKTLDEPAVCRAAIESLAENFSDGVVAPAFWYA
COBD_RHOCA VAAVAKPLIAGDLPGARQAVSMIVGRDPSQLDQPGVARAALESLAENSSDGIVAPLFWGC
COBD_MYCTU GRQISDLLERDDVEAARRLLPSLCGRDPAQLGGPGLTRAALESVAENTADAQVVPLLWAA
COBD_AERPE CIKASRMAAAGRVECSRRLVQGIVRRDLSGEPLGRVLSACIESTAESLVDGYTSPLTYYI
: * : . *: : * :*: :*. *. . :
COBD_THEVO FF-------GLPGAFIARIINTLDSMYGYKDRKNFEFGRFSAFMDTVINYIPARISWFFI
COBD_THEAC FL-------GIPGAFVARIINTLDSMCGYKDRENFEFGRFSAFMDTVINYIPARLSWFFI
COBD_METJA FF-------GLPGAFVYRAINTLDAMIGYKNEKYLWYGKLAARLDDIANFIPSRIAGILL
COBD_METTH LL-------GLPGAFLYRVVNTLDAMVGYLDSENRDIGWFPARLDDILNYIPSRITGVLM
COBD_ARCFU IF-------GVAGAVVYRAVNTCDAMVGYRKGRYEAFGKFAARLDDILNYIPARLSLLFF
COBD_PYRHO LF-------GLPGALVYRAVNTLDAMVGYRTSRYEYFGKFSARLDDILNFLPARITVLLF
COBD_CLOAB LG-------GAPLAMMYKGINTMDSMLGYMNFKYRYIGFFPAKIDDLFNFIPARVTGIIM
CBIB_SALTY LG-------GAPLAMAYKAVNTLDSMVGYKHEKYRAIGMVSARMDDVANYLPARLSWLLL
COBD_SYNY3 LGILFPFVGPWPLAIAYKAASTLDSMVGYKREPYTDLGWFSARLEDYLTWLPCRLTVFML
COBD_SINSX VA-------GLPGLLAYKMLNTADSMIGHKSPKYLHFGWASARLDDLANLPAARLSILLI
COBD_RHOCA VA-------GLPGIAGYKAINTLDSMIGHRTDRYEEFGWASARIDDLVNLIPARLT----
COBD_MYCTU SS-------GVPAVLGYRAINTLDSMIGYRSPRYLRFGWAAARLDDWANYVGARATAVLV
COBD_AERPE LL-------GPLGALLQRLSNTLDGAVGFKTPLLYRQGWFSAKADTLLNFIPARLTAVMV
: .* *. *. * .* : . .* :
COBD_THEVO TFSSDIL--NY--RSKAIPVRRYIRRFDSVNAGWPIASMASALNLRLEKKGHYIVNDDGY
COBD_THEAC GFSADVL--NY--RHKVISPRKYVSRFDSVNAGWPISTMACALNLRLEKRGSYIVNDEGY
COBD_METJA IITAPFYKGDV--KKAIYGFLKEANKVPSPNSGYTMATLANALNITLEKIGYYKLGS---
COBD_METTH VPAALLLGMNW--RGSFRILLRDARRTPSPNSGFTMAAAAGALSVQLEKPGVYVLGDP--
COBD_ARCFU ELLK---------RGAFSYGLKRNVKLNG----CAIAAMSYLLGVKLEKPGYYSLPGI--
COBD_PYRHO LPLNP--------RRVIRYYKMARFKVNSD---KPIAAMSAVLGIWLEKPNIYRFPGR--
COBD_CLOAB CLVSPIIGGNI--FYSIKIMLRDRKNHKSPNCAYPEAAAAAASGIMLGGTNIYFGEVVEK
CBIB_SALTY GIAAGLCRLSG--WRALRIGWRDRYNHSSPNCAWSEACVAGALGIQLGGPNNYFGERVDK
COBD_SYNY3 AILSGKPK------QTWAIVRRDGPLDPSPNSGWSEAIYAAILGIQLGGDNYYQGVLKSK
COBD_SINSX SAGALIHRGASAAKDALTVALRDHGLHRSPNSGWPEAAMAGALDLQLAGPRIYGGVKVSE
COBD_RHOCA --GLFFALASPCRARALAVMARDARSHRSPNAGWPEAAMAGALAVRLSGPRIYADRVANE
COBD_MYCTU VICAPVVGGSP--RGAVRAWRRDAARHPSPNAGVVEAAFAGALDVRLGGPTRYHHELQIR
COBD_AERPE ALAAPLAGAST--LGSLRCIARCARLLESVNAGYPISAFAGALDVRLEKKGFYIVNGGAP
. : : : * *
COBD_THEVO QPGVADIEKSMKIYYLAAYSYIVIFVLPLLVIMAVFL-----------------
COBD_THEAC QPSVRDIERSMHVFYVAVYSYTIIFVLPLLVAMAFLL-----------------
COBD_METJA --GKIDVEKSLNAFKAVDYTVVVFLIIYTLIWWIT-------------------
COBD_METTH -CDGLDNEKLLDAVKLSSLTLILFTLAAAGVMLVIP------------------
COBD_ARCFU EPSAADIERAIKAFVRLTVIAVIFTTIAVSIRIVLLTKLHF-------------
COBD_PYRHO DPRMEDIERALKVYVIVVSEWILLLLLGVIL-----------------------
COBD_CLOAB PTIGEEKNE-LSDFHITKTIILMYSSEILFIIIYVIIICFLGKH----------
CBIB_SALTY PWIGDAQRD-ISVDDISRTIRLMWVASTLALALLIAARCGLSGVA---------
COBD_SYNY3 PLLGDGIQP-LTIAKIAQSLWYSRTVFLWQLLLGLTVILAIQAGAMSEISFNKI
COBD_SINSX PMINGPGRAVATSEDIDAGIAVFYGACTVMAGFVLAIAMI--------------
COBD_RHOCA PWLNGTAPD-PRPADLARGLALYRRAMAGMTLVIGLVAVLWSVS----------
COBD_MYCTU PTLGD-GRS-PKVADLRRAVVLSRVVQAGAAVLAVMLVYRRRP-----------
COBD_AERPE YPGWRDGLKASRLAVSAASLYTVLAALAIALGGGAG------------------