CLUSTAL format seed alignment for MF_00088
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Features found in the protein:- The following colors are used to highlight features:
- blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
- magenta is used to display DISULFID, THIOLEST and THIOETH.
- red is used for all other features, such as INIT_MET, ACTIVE SITE,
METAL,BINDING, NP_BIND, SITE, REGION, etc.
- The ID of the sequence used as the template for feature propagation is
underlined.
- A '<' at the beginning of a sequence or '>' at the end indicate that
the protein is fused with another domain either at the N- or C-terminus.
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KHPA_CLOAB ------MKQLLETIAKSLVDCPDEVQVSEVTGEQSIILELKVAPEDMGKVIGKQGRIAKA
KHPA_CLOPE ------MKELVEIIAKSLVDKPEDVHVNEVLGEESIILELKVSPEDMGKVIGKQGRIAKA
KHPA_CALS4 ------MGELVKTIAKALVDNPDAVEVNEIHGHQSIIIELKVAPEDMGKVIGKQGRIAQA
KHPA_HALH5 ------MKTLVEHIAMALVDHPDDVRVSEHDDGHSLHIELSVHPDDMGKVIGKQGRTAKA
KHPA_AQUAE ---MSALKDIVELTAKELVDNKDKVRVTEIEGEKTVVIELRVDPAELGKVIGKQGRIARA
KHPA_BORBU MKEYGNEIELIEFIVKSLVDKEDEVKLNVIEGEKSTILELRVSQSDVGKIIGRRGRIARA
KHPA_TREPA --MVTMEEELIAYIARALVDRPGEVTVTKSPGEGLEILQLRVASEDVGKVIGKHGRIARA
KHPA_LEPIC ------MEELLKYIVASLVEFPEEIVIREIEGEEQNIIELRVSPKDVGKVIGKNGRIAKS
KHPA_LEPIN ------MEELLKYIVASLVEFPEEIVIREIEGEEQNIIELRVSPKDVGKVIGKNGRIAKS
KHPA_CHLCV ------MKDFLAYIIKNLVDRPEEVHIKEVQGTHTIIYELTVAKPDIGKIIGKEGRTIKA
KHPA_CHLPN ------MKEFLAYIIKNLVDRPEEVRIKEVQGTHTIIYELSVAKPDIGKIIGKEGRTIKA
KHPA_CHLMU ------MKEFLAYIVKNLVDRPEEVHLKEVQGTNTIIYELTVAKGDIGKIIGKEGRTIKA
KHPA_CHLTR ------MKEFLAYIVKNLVDKPEEVHLKEVQGTNTIIYELTVAKGDIGKIIGKEGRTIKA
KHPA_LISIN ------MEELILSIVKPLVDHPEDVVITPEETDTSLTYKLSVSKEDMGRVIGKQGRIAKA
KHPA_LISMF ------MEELILSIVKPLVDHPEDVVITPEETDTSLTYKLSVSKEDMGRVIGKQGRIAKA
KHPA_LISMO ------MEELILSIVKPLVDHPEDVVITPEETDTSLTYKLSVSKEDMGRVIGKQGRIAKA
KHPA_BACSU -MTDQHLEDLIVHIVTPLVDHPDDIRVIREETDQKIALRLSVHKSDTGKVIGKQGRTAKA
KHPA_STRR6 ---MDTIENLIIAIVKPLISQPDALTIKIEDTPEFLEYHLNLDQSDVGRVIGRKGRTISA
KHPA_LACPL ---MADIKALITTVVTPLVQYPDDIKVDFKETTRYLEYNLTVNPEDIGRVIGRQGRVASA
KHPA_OCEIH ------MKALIESIVASLVDYPEEIVINKTEEESKVVYHLTVHPDDVGKVIGKNGRIAKA
KHPA_THEMA ------MKELLEKILRGIVKHPEEVVVMEFDEEGKKVYEIVVNEEDVGQVIGKDGRTIKS
KHPA_MYCTU --MSAVVVDAVEHLVRGIVDNPDDVRVDLITSRRGRTVEVHVHPDDLGKVIGRGGRTATA
KHPA_MYCTO --MSAVVVDAVEHLVRGIVDNPDDVRVDLITSRRGRTVEVHVHPDDLGKVIGRGGRTATA
KHPA_MYCBO --MSAVVVDAVEHLVRGIVDNPDDVRVDLITSRRGRTVEVHVHPDDLGKVIGRGGRTATA
KHPA_MYCLE --MSTVVVDAVEHVVRGIVDNPDDVRVDLVISRRGRTVEVHVHPDDLGKVIGRGGRTATA
KHPA_STRCO -----MLEEALEHLVKGIVDNPDDVQVASRNLRRGRVLEVRVHPDDLGKVIGRNGRTARA
KHPA_STRLI -----MLEEALEHLVKGIVDNPDDVQVASRNLRRGRVLEVRVHPDDLGKVIGRNGRTARA
KHPA_LEIXX -----MLAPALTHVVKGIVDHPDDVRVVAKSSPRGEVLEVRVNPEDLGRVIGRSGRTAKA
: ::. : : .: : : *::**: ** :
KHPA_CLOAB IRTVIKAAAVKENKRVVVEII-------
KHPA_CLOPE IRTVVKAAAIKENKKVVVEII-------
KHPA_CALS4 IRTLVKAAALKEKKRVIVEII-------
KHPA_HALH5 LRSVVYAAATKQKRRVRLDIID------
KHPA_AQUAE LRTILTAIGRKIGKRVVLEILE------
KHPA_BORBU IRTLLGACAAKTNRRVQLEILD------
KHPA_TREPA LRTLLSASAHASQTRYALEIID------
KHPA_LEPIC LRAILTAASVKAGKNFSLEIID------
KHPA_LEPIN LRAILTAASVKAGKNFSLEIID------
KHPA_CHLCV IRTLLVSVASRNNVKVSLEIMEDK----
KHPA_CHLPN IRTLLVSVASRNNVRVSLEIMEEK----
KHPA_CHLMU IRTLLVSVASRDNVKVSLEIMEER----
KHPA_CHLTR IRTLLVSVASRDNVKVSLEIMEER----
KHPA_LISIN IRTLVYAVGSKNDKKIRLEIIE------
KHPA_LISMF IRTLVYAVGSKNDKKIRLEIIE------
KHPA_LISMO IRTLVYAVGSKNDKKIRLEIIE------
KHPA_BACSU IRTAVFAAGVQSSKKVQFEIFD------
KHPA_STRR6 IRTIVYSVPTE-YKKVRIVIDEK-----
KHPA_LACPL IRTIVYSVRVSGPKRVRLTIEDGQQKNS
KHPA_OCEIH IRTVVYASKTDGNKRIYLDIM-------
KHPA_THEMA LKILLSALMGD-SKEITIKVVR------
KHPA_MYCTU LRTLVAGIG-GRGIRVDVVDTDQ-----
KHPA_MYCTO LRTLVAGIG-GRGIRVDVVDTDQ-----
KHPA_MYCBO LRTLVAGIG-GRGIRVDVVDTDQ-----
KHPA_MYCLE LRKLVAGIG-GRGIRVDVVDTDQ-----
KHPA_STRCO LRTVVGAIG-GRGVRVDLVDVDHVR---
KHPA_STRLI LRTVVGAIG-GRGVRVDLVDVDHVR---
KHPA_LEIXX LRTLVTALADGRRVRVDVVDD-------
:: : . . .