CLUSTAL format seed alignment for MF_00088

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Features found in the protein:
The following colors are used to highlight features:
blue indicates DNA_BIND, DOMAIN, PROPEP, REPEAT, SIGNAL, TRANSMEM
and ZN_FING.
green indicates INTRAMEM, MOTIF, PEPTIDE, TOPOD_DOM and TRANSIT.
magenta is used to display DISULFID
red indicates ACT_SITE, BINDING, CARBOHYD, CROSS_LNK, LIPID,
MOD_RES, NON_STD and SITE.
The ID of the sequence used as the template for feature propagation is 
underlined.
An 'X' at the beginning or at the end of a sequence indicates that
the protein is fused with another domain respectively at its N- or
C-terminus.
Sequences that are concerned have a '_P' (for partial) suffix added
to their ID.
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KHPA_CLOAB      ------MKQLLETIAKSLVDCPDEVQVSEVTGEQSIILELKVAPEDMGKVIGKQGRIAKA
KHPA_CLOPE      ------MKELVEIIAKSLVDKPEDVHVNEVLGEESIILELKVSPEDMGKVIGKQGRIAKA
KHPA_CALS4      ------MGELVKTIAKALVDNPDAVEVNEIHGHQSIIIELKVAPEDMGKVIGKQGRIAQA
KHPA_HALH5      ------MKTLVEHIAMALVDHPDDVRVSEHDDGHSLHIELSVHPDDMGKVIGKQGRTAKA
KHPA_AQUAE      ---MSALKDIVELTAKELVDNKDKVRVTEIEGEKTVVIELRVDPAELGKVIGKQGRIARA
KHPA_BORBU      MKEYGNEIELIEFIVKSLVDKEDEVKLNVIEGEKSTILELRVSQSDVGKIIGRRGRIARA
KHPA_TREPA      --MVTMEEELIAYIARALVDRPGEVTVTKSPGEGLEILQLRVASEDVGKVIGKHGRIARA
KHPA_LEPIC      ------MEELLKYIVASLVEFPEEIVIREIEGEEQNIIELRVSPKDVGKVIGKNGRIAKS
KHPA_LEPIN      ------MEELLKYIVASLVEFPEEIVIREIEGEEQNIIELRVSPKDVGKVIGKNGRIAKS
KHPA_CHLCV      ------MKDFLAYIIKNLVDRPEEVHIKEVQGTHTIIYELTVAKPDIGKIIGKEGRTIKA
KHPA_CHLPN      ------MKEFLAYIIKNLVDRPEEVRIKEVQGTHTIIYELSVAKPDIGKIIGKEGRTIKA
KHPA_CHLMU      ------MKEFLAYIVKNLVDRPEEVHLKEVQGTNTIIYELTVAKGDIGKIIGKEGRTIKA
KHPA_CHLTR      ------MKEFLAYIVKNLVDKPEEVHLKEVQGTNTIIYELTVAKGDIGKIIGKEGRTIKA
KHPA_LISIN      ------MEELILSIVKPLVDHPEDVVITPEETDTSLTYKLSVSKEDMGRVIGKQGRIAKA
KHPA_LISMF      ------MEELILSIVKPLVDHPEDVVITPEETDTSLTYKLSVSKEDMGRVIGKQGRIAKA
KHPA_LISMO      ------MEELILSIVKPLVDHPEDVVITPEETDTSLTYKLSVSKEDMGRVIGKQGRIAKA
KHPA_BACSU      -MTDQHLEDLIVHIVTPLVDHPDDIRVIREETDQKIALRLSVHKSDTGKVIGKQGRTAKA
KHPA_STRR6      ---MDTIENLIIAIVKPLISQPDALTIKIEDTPEFLEYHLNLDQSDVGRVIGRKGRTISA
KHPA_LACPL      ---MADIKALITTVVTPLVQYPDDIKVDFKETTRYLEYNLTVNPEDIGRVIGRQGRVASA
KHPA_OCEIH      ------MKALIESIVASLVDYPEEIVINKTEEESKVVYHLTVHPDDVGKVIGKNGRIAKA
KHPA_THEMA      ------MKELLEKILRGIVKHPEEVVVMEFDEEGKKVYEIVVNEEDVGQVIGKDGRTIKS
KHPA_MYCTU      --MSAVVVDAVEHLVRGIVDNPDDVRVDLITSRRGRTVEVHVHPDDLGKVIGRGGRTATA
KHPA_MYCTO      --MSAVVVDAVEHLVRGIVDNPDDVRVDLITSRRGRTVEVHVHPDDLGKVIGRGGRTATA
KHPA_MYCBO      --MSAVVVDAVEHLVRGIVDNPDDVRVDLITSRRGRTVEVHVHPDDLGKVIGRGGRTATA
KHPA_MYCLE      --MSTVVVDAVEHVVRGIVDNPDDVRVDLVISRRGRTVEVHVHPDDLGKVIGRGGRTATA
KHPA_STRCO      -----MLEEALEHLVKGIVDNPDDVQVASRNLRRGRVLEVRVHPDDLGKVIGRNGRTARA
KHPA_STRLI      -----MLEEALEHLVKGIVDNPDDVQVASRNLRRGRVLEVRVHPDDLGKVIGRNGRTARA
KHPA_LEIXX      -----MLAPALTHVVKGIVDHPDDVRVVAKSSPRGEVLEVRVNPEDLGRVIGRSGRTAKA
                          :      ::.    : :           .: :   : *::**: **   :

KHPA_CLOAB      IRTVIKAAAVKENKRVVVEII-------
KHPA_CLOPE      IRTVVKAAAIKENKKVVVEII-------
KHPA_CALS4      IRTLVKAAALKEKKRVIVEII-------
KHPA_HALH5      LRSVVYAAATKQKRRVRLDIID------
KHPA_AQUAE      LRTILTAIGRKIGKRVVLEILE------
KHPA_BORBU      IRTLLGACAAKTNRRVQLEILD------
KHPA_TREPA      LRTLLSASAHASQTRYALEIID------
KHPA_LEPIC      LRAILTAASVKAGKNFSLEIID------
KHPA_LEPIN      LRAILTAASVKAGKNFSLEIID------
KHPA_CHLCV      IRTLLVSVASRNNVKVSLEIMEDK----
KHPA_CHLPN      IRTLLVSVASRNNVRVSLEIMEEK----
KHPA_CHLMU      IRTLLVSVASRDNVKVSLEIMEER----
KHPA_CHLTR      IRTLLVSVASRDNVKVSLEIMEER----
KHPA_LISIN      IRTLVYAVGSKNDKKIRLEIIE------
KHPA_LISMF      IRTLVYAVGSKNDKKIRLEIIE------
KHPA_LISMO      IRTLVYAVGSKNDKKIRLEIIE------
KHPA_BACSU      IRTAVFAAGVQSSKKVQFEIFD------
KHPA_STRR6      IRTIVYSVPTE-YKKVRIVIDEK-----
KHPA_LACPL      IRTIVYSVRVSGPKRVRLTIEDGQQKNS
KHPA_OCEIH      IRTVVYASKTDGNKRIYLDIM-------
KHPA_THEMA      LKILLSALMGD-SKEITIKVVR------
KHPA_MYCTU      LRTLVAGIG-GRGIRVDVVDTDQ-----
KHPA_MYCTO      LRTLVAGIG-GRGIRVDVVDTDQ-----
KHPA_MYCBO      LRTLVAGIG-GRGIRVDVVDTDQ-----
KHPA_MYCLE      LRKLVAGIG-GRGIRVDVVDTDQ-----
KHPA_STRCO      LRTVVGAIG-GRGVRVDLVDVDHVR---
KHPA_STRLI      LRTVVGAIG-GRGVRVDLVDVDHVR---
KHPA_LEIXX      LRTLVTALADGRRVRVDVVDD-------
                ::  : .       .  .