CLUSTAL format seed alignment for MF_00179
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Features found in the protein:- The following colors are used to highlight features:
- blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
- magenta is used to display DISULFID, THIOLEST and THIOETH.
- red is used for all other features, such as INIT_MET, ACTIVE SITE,
METAL,BINDING, NP_BIND, SITE, REGION, etc.
- The ID of the sequence used as the template for feature propagation is
underlined.
- An 'X' at the beginning or at the end of a sequence indicates that
the protein is fused with another domain respectively at its N- or
C-terminus.
Sequences that are concerned have a '_P' (for partial) suffix added
to their ID.
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RIBA_VIBPA -------------MAEVRARVDFKVGA-KSNIDAEILSFRGLKTDKEHVAVIFKQADQTQ
RIBA_VIBVU -------------MAEVRARVDFKVGA-KSNIDAEILSFRGLKTDKEHVAVIFKSADVTQ
RIBA_VIBCH -------------MAEVRARVDFKVGA-KSNIDAEILSFHGLQSDKEHVAVIFKSADTTQ
RIBA_PHOPO -------------MVNVRERVSLKVGI-NSNAPAELLSFNGLESGKEHIALIFKDAYKAF
RIBA_HELPY --------------MKRLEVSNQAKLP-TQFGEFYIQCFREKGSNGSK-DHLVVFTPNFS
RIBA_HELPJ --------------MKRLEVSNQAKLP-TQFGEFCIQCFREKGSNGSK-DHLVIFTPNFP
RIBA_HELHP ---------------MKYEISEQAKLP-TRFGNFFTKSFREYGKNNTLFEHLVVFTHTLG
RIBA_SALTI ---------------MQLKRVAEAKLP-TPLGDFLMVGFEELATGHDHAALVFGDIS-GK
RIBA_SALTY ---------------MQLKRVAEAKLP-TPLGDFLMVGFEELATGHDHAALVFGDIS-GK
RIBA_SALPA ---------------MQLKRVAEAKLP-TPLGDFLMVGFEELATGHDHAALVFGDIS-GK
RIBA_SALCH ---------------MQLKRVAEAKLP-TPLGDFLMVGFEELATGHDHAALVFGDIS-GK
RIBA_ECOLI ---------------MQLKRVAEAKLP-TPWGDFLMVGFEELATGHDHVALVYGDIS-GH
RIBA_ECO57 ---------------MQLKRVAEAKLP-TPWGDFLMVGFEELATGHDHVALVYGDIS-GH
RIBA_SHIFL ---------------MQLKRVAEAKLP-TPWGDFLMVGFEELATGHDHVALVYGDIS-GH
RIBA_ECOL6 ---------------MQLKRVAEAKLP-TPWGDFLMVGFEELATGHDHVALVYGDIS-GH
RIBA_PECAS ---------------MQLKRVAEAKLP-TPWGDFLMVGFEEIATGHDHLALVYGDIS-GS
RIBA_YERPE ---------------MQLKRVAEAKLP-TPWGDFLMVGFEELATGHDHLALIFGDIS-GD
RIBA_YERPS ---------------MQLKRVAEAKLP-TPWGDFLMVGFEELATGHDHLALIFGDIS-GD
RIBA_BLOFL ---------------MQLKRVAEAKLP-TFWGDFLIIGFKENQTEHNHIALTYGDLT-GS
RIBA_BLOPB ---------------MRLRRVTEARLP-TLWGNFLIVGFEENFTGHNHIALIYGNIT-GS
RIBA_BUCAI ---------------MQLI--EKAMLP-TPWGNFLIFGFEEKKNGKNHVALVYGDIK-TN
RIBA_BUCAP ---------------MQLIQIEKAILP-TPWGDFLIFGFEEKKNGKNHIALVYGKIK-KN
RIBA_BUCBP ---------------MKLTKISEAKLP-TSFGEFLMIVFEESKTDKNHIALVYGDIKDTN
RIBA_WIGBR ---------------MQIKRITEANLP-TPWTNFLMIGFEEIKTKCNHIALLHGNMS-KN
RIBA_HAEIN --------------MAKIQLVAQANLP-TEYGIFKMVGFEFPDTKKEHVALVMGDISNAD
RIBA_HAEI8 --------------MAKIQLVAQANLP-TEYGIFKMVGFEFPDTKKEHVALVMGDISNAD
RIBA_PASMU --------------MAKIQRVTEANLP-TEFGMFRIVGFEFPDTKKEHVALVLGEVENTD
RIBA_NEIG1 -------------MSELLDHVASCRLP-TEWGVFTMHGFEEAN-GQEHVALTVGNCS-DG
RIBA_NEIMB -------------MSEMLNHVASCRLP-TEWGVFTMHGFEEAN-GQEHVALTVGNFS-DG
RIBA_NEIMA -------------MSELLNYVASCRLP-TEWGVFTMHGFEEAG-GQEHVALTVGDCS-DG
RIBA_PSEPK ---------------MPVVFVAASKLP-TPFATFTMHGFLDEATGREHVVLSLGDIA-DG
RIBA_PSESM ---------------MPVVFVAASKLP-TPFAEFAMHGFIESATGREHVVLSLGDVA-DG
RIBA_PSEAE ---------------MSVVFVAASKLP-TPFGEFTMHGFLDEESGKEHVALSMGDIA-DG
RIBA_SHEON ---------------MSIKYVATSKLP-TPWGVFAMHGFEDTETGKEHVALTFGSLS-SD
RIBA_ACIAD ---------------MAIEFVATSKLP-TKFGDFNISVFQDPVTGEEHVALSKGLEIAPT
RIBA_STRCO MTEKIGVLGKKTTQRTDVERIVVTPLP-TVYGKFRAFGYFDHERGDEQVALVHGDLG--A
RIBA_XYLFT_P ----------------XYELVTRTPVPLRDLGMSEFIVFRGGIAQRDQVAILIGRPD-LS
:
RIBA_VIBPA DTPLVRMHSECLTGDVFHSSRCDCGEQLEETIQRMGE--SGGVILYLR-QEGR-GIGLYN
RIBA_VIBVU EVPLVRMHSECLTGDVFHSSRCDCGEQLEETINRMGE--SGGIILYLR-QEGR-GIGLYN
RIBA_VIBCH EAPLVRMHSECLTGDVFHSSRCDCGEQLEETITRMGQ--SGGIILYLR-QEGR-GIGLYN
RIBA_PHOPO -VPLVRMHSECLTGDGFHSTRCDCGEQLDETIEIMAE--LGGIILYLR-QEGRWGLGLYN
RIBA_HELPY QNPLVRLHSECLTGDALGSQKCDCGGALQMALERISK--EGGLVIYLR-QEGR-GIGLFN
RIBA_HELPJ QNPLVRLHSECLTGDALGSQKCDCGGALQMALERISK--EGGLVIYLR-QEGR-GIGLFN
RIBA_HELHP ETPLVRIHSECLTGDVFGSKKCDCGNELALAMEQIAHNTEGGMLIYLR-QEGR-GIGLFN
RIBA_SALTI TPVLARVHSECLTGDALFSLRCDCGFQLEAALTHIAE-EGRGILIYHR-QEGR-NIGLLN
RIBA_SALTY TPVLARVHSECLTGDALFSLRCDCGFQLEAALTHIAE-EGRGILIYHR-QEGR-NIGLLN
RIBA_SALPA TPVLARVHSECLTGDALFSLRCDCGFQLEAALTHIAE-EGRGILIYHR-QEGR-NIGLLN
RIBA_SALCH TPVLARVHSECLTGDALFSLRCDCGFQLEAALTHIAE-EGRGILIYHR-QEGR-NIGLLN
RIBA_ECOLI TPVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAE-EGRGILLYHR-QEGR-NIGLLN
RIBA_ECO57 TPVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAE-EGRGILLYHR-QEGR-NIGLLN
RIBA_SHIFL TPVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAE-EGRGILLYHR-QEGR-NIGLLN
RIBA_ECOL6 TPVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAE-EGRGILLYHR-QEGR-NIGLLN
RIBA_PECAS VPVLARVHSECLTGDALFSLRCDCGFQLEAALGHIAE-EGRGVLLYHR-QEGR-NIGLLN
RIBA_YERPE KPVLSRVHSECLTGDALFSLRCDCGFQLEVALTRIAE-EGRGVLIYHR-QEGR-NIGLLN
RIBA_YERPS KPVLSRVHSECLTGDALFSLRCDCGFQLEVALTRIAE-EGRGVLIYHR-QEGR-NIGLLN
RIBA_BLOFL NPVLTRIHSECLTGDALFSSRCDCGIQLSTALRYITE-EGQGILIYHR-QEGR-NIGLLN
RIBA_BLOPB DPVLTRIHSECLTGDALFSSRCDCGFQLKTALHCITE-EKRGILIYHR-QEGR-NIGLLN
RIBA_BUCAI TPTLSRVHSECLTGDAFFSLRCDCGSQLEMSMKRISQ-EGSGVLIYHR-QEGR-NIGLLN
RIBA_BUCAP IPILARIHSECLTGDAFFSLRCDCGIQLEMAMSRIAS-EGNGILIYHR-QEGR-NIGLLN
RIBA_BUCBP NSVLSRIHSECLTGDALFSIRCDCGFQLKSALMEIVK-EGSGILIYHR-QEGR-NIGLSN
RIBA_WIGBR TSILTRIHSECLTGDALFSLRCDCGFQLQSALSHIAN-EKCGILIYHR-QEGR-NIGLIN
RIBA_HAEIN EPVLARIHSECLTGDALHSLKCDCGFQLATALKQIQE-EGRGVLIYHR-EEGR-GIGLIN
RIBA_HAEI8 EPVLARIHSECLTGDALHSLKCDCGFQLATALKQIQE-EGRGVLIYHR-EEGR-GIGLIN
RIBA_PASMU EPILARIHSECLTGDALYSLKCDCGFQLAAALRQISQ-EGRGVLIYHR-EEGR-GIGLIN
RIBA_NEIG1 NPVLTRIHSECLTGDALFSRKCDCGPQLEAAMRAVQA-EGRGIIVYLR-QEGR-GIGLIN
RIBA_NEIMB NPVLTRIHSECLTGDALFSRKCDCGPQLEAAMRAVQT-EGRGIIVYLR-QEGR-GIGLIN
RIBA_NEIMA NPVLTRIHSECLTGDALFSKKCDCGPQLEAAMKAVQA-EGRGIIVYLR-QEGR-GIGLIN
RIBA_PSEPK QPVLGRLHSECLTGDALFSQRCDCGSQLEAALQAIAR-EGRGVLLYLR-QEGR-GIGLLN
RIBA_PSESM APVLGRVHSECLTGDALFSQRCDCGSQLEAAMRAIAT-EGRGVLLYLR-QEGR-GIGLMN
RIBA_PSEAE APVLGRLHSECLTGDALFSLRCDCGFQLEGALAAIAE-EGRGVLLYLR-QEGR-GIGLLN
RIBA_SHEON EPVLGRIHSECLTGDALFSLRCDCGFQLQTAMQNIAE-TGSGFILYLR-QEGR-GIGLLN
RIBA_ACIAD GPVLVRIHSECLTGDAFASLKCDCGPQLQATQKLIND-VGQGVILYLR-QEGR-GIGLTN
RIBA_STRCO EDVLTRLHSECLTGDAFGSQHCECGAQLASALRQVAD-AGSGIVVYLRGHEGR-GIGLLA
RIBA_XYLFT_P SAVPVRVHSSCLTGDLFGSLKCDCGDQLRHSLATLKA-LGGGVLLYLD-QEGR-GNGIAA
*:**.***** : * :*:** * : : *.::* .*** . *:
RIBA_VIBPA KIDAYRLQSQGMNTYEANNHLGFDDDLRDFTEAAQMLEALGIKKIRLVTNNPKKIRELAE
RIBA_VIBVU KIDAYRLQSEGMNTYEANNHLGFDDDLRDFTEAAQMLEALGIKQIRLVTNNPKKIRELSE
RIBA_VIBCH KIDAYRLQSQGMNTYEANNHLGFGDDLRDFTEAAQMLQALGVKKIRLVTNNPKKIRELQE
RIBA_PHOPO KIDAYKLQSQGMDTYEANNHLGFDDDLREFSEAAQMLTALGIKDIRLVTNNPKKIKDLQQ
RIBA_HELPY KVNAYALQDKGYDTIQANEMIGFKDDERDYSVAGEILEYYRIKKMRLLTNNPKKIAALEK
RIBA_HELPJ KVNAYALQDKGYDTIQANEMIGFKDDERDYSIAGEILEYYRIKKMRLLTNNPLKIAALEK
RIBA_HELHP KINAYALQDKGYDTVEANQQLGFAGDMRSYEIVGEIFKHFHITHINLLTNNPRKIDALAP
RIBA_SALTI KIRAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVDEVRLLTNNPKKVEILTE
RIBA_SALTY KIRAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVDEVRLLTNNPKKVEILTE
RIBA_SALPA KIRAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVDEVRLLTNNPKKVEILTE
RIBA_SALCH KIRAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVDEVRLLTNNPKKVEILTE
RIBA_ECOLI KIRAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTE
RIBA_ECO57 KIRAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTE
RIBA_SHIFL KIRAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTE
RIBA_ECOL6 KIRAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTE
RIBA_PECAS KIRAYALQDLGADTVEANHQLGFAADERDFTLCADMFKLLDVDEVRLLTNNPQKVKILNE
RIBA_YERPE KIRAYALQDLGADTVEANHQLGFAADERDFTLCSDMYKLLGIKAVRLLTNNPKKVEILTQ
RIBA_YERPS KIRAYALQDLGADTVEANHQLGFAADERDFTLCSDMYKLLGIKAVRLLTNNPKKVEILTQ
RIBA_BLOFL KIRAYSLQDHGADTVEANQCLGFNADERDFTVCADILKLLNIQTIRLLTNNPQKIEILNK
RIBA_BLOPB KIRAYALQDNGADTVEANQCLGFAPDERDFTICADILKLLRVKKIRILTNNPKKVEILNK
RIBA_BUCAI KIKAYALQDRGLDTVQANQKLGFSADERDFSLCADIFNILNIKKIRLLTNNPFKVQMLSD
RIBA_BUCAP KIKAYSLQDKGLDTVEANQKLGFSADERDFSLCADIFNILNIKKIRLLTNNPFKVDMLIA
RIBA_BUCBP KIRAYALQDIGLDTVEANHHLGFSADERDFSVCIDIFNTLNIKKIKLLTNNPSKVTVLNN
RIBA_WIGBR KIKAYSLQDKGIDTVDANYHLGFEADERDFTVCVEILNLLQIKSIRLLTNNPNKVNVLTS
RIBA_HAEIN KIRAYSLQDKGMDTIEANLALGFKADERNFEVCADMFELLGVKKVRLMTNNPEKVETMKK
RIBA_HAEI8 KIRAYSLQDKGMDTIEANLALGFKADERNFEVCADMFELLGVKKVRLMTNNPEKVETMKK
RIBA_PASMU KIRAYSLQDKGMDTIEANLALGFAADERNFEVCADIFALLGINKVRLLTNNPNKIDTMKK
RIBA_NEIG1 KIRAYHLQEQGMDTVEANLALGLPVDARDFRLAQSIYEYLGIRSVKLLTNNPEKIQTLKD
RIBA_NEIMB KIRAYHLQDQGMDTVEANLALGLPVDARDFRLAQSIYEYLGIRSVKLLTNNPEKIQTLKD
RIBA_NEIMA KIRAYHLQDQGMDTVEANVALGLPVDARDFRLAQSIYEYLGIRSVKLLTNNPEKIQTLKD
RIBA_PSEPK KIRAYELQDGGADTVEANERLGFAADQRDYAICLPMLEHLGVKSLRLMTNNPRKVKALTD
RIBA_PSESM KIRAYELQDGGADTVEANERLGFAADQRDYAICLPMLQHLGVQSLRLMTNNPRKVKALTD
RIBA_PSEAE KIRAYELQDGGADTVEANLQLGFGADQRDYAMCQPMLAHLGVSSLRLMTNNPRKVKALES
RIBA_SHEON KIRAYELQDKGANTVEANEQLGFPADMRKYDMIQPMLEKIGVKHVRLMTNNPRKVKAMKE
RIBA_ACIAD KIRAYALQDQGHDTVDANLLLNLPADARRYDMCSIMLDHLQVKQVKLITNNPLKLKALTD
RIBA_STRCO KLRAMALQAEGLDTVEANLALGLPVDARDYGVAARILDDLGVRSVRLMSNNPRKREALVR
RIBA_XYLFT_P KIRAYGYQHVGLDTIDADAQLGFGPDERRYTGAVMMLRALGITRIQLLSNNPAKAERLRA
*: * * * :* :*: :.: * * : : : :.:::*** * :
RIBA_VIBPA YGIEIVEVVNTSAHIKDGNENYLRAKVSHGKHNLKV------------------------
RIBA_VIBVU YGIEIVEVVNTSAHIKEGNESYLKAKVSHGKHHLKV------------------------
RIBA_VIBCH HGIEIVEVVHTSAHIKDGNENYLKAKVSHGKHQLKL------------------------
RIBA_PHOPO NGINIVEVVGTKAHLKEGNEGYLKAKASHGRHCFNFDK----------------------
RIBA_HELPY YA--EVTRESLIVCANEHNQGYLEVKKLKMGHLL--------------------------
RIBA_HELPJ YA--EVTRESLIVCANEHNQGYLEVKKLKMGHLL--------------------------
RIBA_HELHP YA--KVVRHSIITPSNPHNQAYLEVKKQKLGHLL--------------------------
RIBA_SALTI AGINIVERVPLIVGRNPNNEHYLDTKAAKMGHLLSK------------------------
RIBA_SALTY AGINIVERVPLIVGRNPNNEHYLDTKAAKMGHLLSK------------------------
RIBA_SALPA AGINIVERVPLIVGRNPNNEHYLDTKAAKMGHLLSK------------------------
RIBA_SALCH AGINIVERVPLIVGRNPNNEHYLDTKAAKMGHLLSK------------------------
RIBA_ECOLI AGINIVERVPLIVGRNPNNEHYLDTKAEKMGHLLNK------------------------
RIBA_ECO57 AGINIVERVPLIVGRNPNNEHYLDTKAEKMGHLLNK------------------------
RIBA_SHIFL AGINIVERVPLIVGRNPNNEHYLDTKAEKMGHLLNK------------------------
RIBA_ECOL6 AGINIIERVPLIVGRNPNNEHYLDTKAEKMGHLLNK------------------------
RIBA_PECAS AGINIVERVPLIVGRNPKNEHYLATKAAKMGHILDMK-----------------------
RIBA_YERPE AGINIVERVPLIVGENPKNEHYLATKAAKMGHLLTK------------------------
RIBA_YERPS AGINIVERVPLIVGENPKNEHYLATKAAKMGHLLTK------------------------
RIBA_BLOFL SHIIVTERVPLIVGRNPKNSKYLDTKALKLGHLFSSYYK---------------------
RIBA_BLOPB SCINITERVPLIVGRNPENSRYLDTKASKLGHLFYSYHK---------------------
RIBA_BUCAI AGINIVERVPLIVKKNPKNAYYLKTKAEKMGHLLSE------------------------
RIBA_BUCAP SGIEIVERIPIIVEKNDKNAHYLKTKAEKMGHLLFK------------------------
RIBA_BUCBP AGIQITERISLIVGRNAKNSKYLNTKAHKMGHFLPIEY----------------------
RIBA_WIGBR AGILITERVPLIVGSNPSNTKYLYTKAKKMGHLLNNK-----------------------
RIBA_HAEIN AGINVVERVPLNVGENRYNTKYLDTKAKKMGHYIVHNNDEQHLMTCPHCQEEII------
RIBA_HAEI8 AGINVVERVPLNVGENRYNTKYLDTKAKKMGHYIVHNNDEQHLMTCPHCQEEII------
RIBA_PASMU AGINIVERVALNVGENRYNTEYLDTKAKKMGHFIIHNQ-QKYPLECPYCSEEVPVQEK--
RIBA_NEIG1 AGINVVERIPLHVGENLENERYLQTKADKLGHLMSE------------------------
RIBA_NEIMB AGINVVERIPLHVGENLENKRYLQTKADKLGHLMSE------------------------
RIBA_NEIMA AGINVVERIPLHVGENLENKRYLQTKADKLGHLMSE------------------------
RIBA_PSEPK MNIVVAERVPLHTGHNPHNRYYLATKAGKLGHMLGNEHQGEVPQA---------------
RIBA_PSESM MGINVAERVPLHTGQNPHNRLYLATKAGKLGHMMGNEHQSEVGPA---------------
RIBA_PSEAE YAITVAERVPLQKGLNKHNRRYLATKAGKLGHMLGSLHQGEAETT---------------
RIBA_SHEON IGIEVVERVPLQVGKNRYNEAYLKTKSTELGHMMSEYHFTDEE-----------------
RIBA_ACIAD LGINVIDRVPLTVGKNPFNEQYLKTKKERMAHLYQKDDF---------------------
RIBA_STRCO HGIRVAEQVPLLIPPCESNITYLRTKRERLDHHLPHLDAAMAHVSS--------------
RIBA_XYLFT_P AGIIVKQRISVIGQITKQNEHYLRTKVSRAGHDLDIDALIMTSQRPQDPSETVDGETVKP
* ** .* . *
RIBA_VIBPA -------
RIBA_VIBVU -------
RIBA_VIBCH -------
RIBA_PHOPO -------
RIBA_HELPY -------
RIBA_HELPJ -------
RIBA_HELHP -------
RIBA_SALTI -------
RIBA_SALTY -------
RIBA_SALPA -------
RIBA_SALCH -------
RIBA_ECOLI -------
RIBA_ECO57 -------
RIBA_SHIFL -------
RIBA_ECOL6 -------
RIBA_PECAS -------
RIBA_YERPE -------
RIBA_YERPS -------
RIBA_BLOFL -------
RIBA_BLOPB -------
RIBA_BUCAI -------
RIBA_BUCAP -------
RIBA_BUCBP -------
RIBA_WIGBR -------
RIBA_HAEIN -------
RIBA_HAEI8 -------
RIBA_PASMU -------
RIBA_NEIG1 -------
RIBA_NEIMB -------
RIBA_NEIMA -------
RIBA_PSEPK -------
RIBA_PSESM -------
RIBA_PSEAE -------
RIBA_SHEON -------
RIBA_ACIAD -------
RIBA_STRCO -------
RIBA_XYLFT_P IAKTGHA