CLUSTAL format seed alignment for MF_00194
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Features found in the protein:
- The following colors are used to highlight features:
- blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
- magenta is used to display DISULFID, THIOLEST and THIOETH.
- red is used for all other features, such as INIT_MET, ACTIVE SITE,
METAL,BINDING, NP_BIND, SITE, REGION, etc.
- The ID of the sequence used as the template for feature propagation is
underlined.
- A '<' at the beginning of a sequence or '>' at the end indicate that
the protein is fused with another domain either at the N- or C-terminus.
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RDGC_NEIG1 -MWFKQISFYPLNKEKLPEADVLADKLAEAEFTHCQGLDWFSEGFTAPVSF--SPELVFP
RDGC_NEIMB -MWFKQISFYPLNKEKLPEADVLADKLAEAEFTHCQGLDWFSEGFTAPVSF--SPELVFP
RDGC_NEIMA -MWFKQISFYPLNKEKLPEADVLADKLAEAEFTHCQGLDWFSEGFTAPVSF--SPELVFP
RDGC_ECOLI MLWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMGWVPPMGSH-SDALTHV
RDGC_ECO57 MLWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMGWVPPMGSH-SDALTHV
RDGC_SALTY MLWFKNLMVYRLSRDITLRAEEMEKQLASMTFTPCGSQDMAKMGWVPPMGSH-SDALTHT
RDGC_YERPE MLWFKNLMVYRLSREVSLSADEMEKQLSAFSFTPCGSQDMAKTGWVSPMGSH-SDALTHT
RDGC_VIBCH -MWFKNCMVYRVNREVNFNADQLEKQLAEFRFTPCGSQDKQKFGWVSALGKH-GDMMTHV
RDGC_HAEIN -MWFKNLMTYRLTKPLDWDLAQLQTQLEDCQFHPCGTQDQSKFGWSAPLRG--SDLLYFS
RDGC_PASMU MVWFKNLMIYRLTKALDWTADSLQTALQQCEYHPCQQSDMSKFGWTNPLRG--TEMLHFS
RDGC_PSEAE -MWFRNLLVYRLTQDLQLDADSLEKALGEKSARPCASQELTTYGFTAPFGKGPDAPLVHV
RDGC_XYLFA -MFFRNLTLFRFPTSLDFS--QIDSILPNARLRPVGPLEMTSRGFISPFGREEQEVLNQR
RDGC_RALN1 -MWFKNLQLHRLPAPWAVAPDQIEKWLAPHAFQPGNSVEKQCSGWASPRDD--G-ALVYS
::*:: . . : * : *: . :
RDGC_NEIG1 ADFTLRVALKKEEKVLPAGVIRDILEEKVAEIQNNEARNVGRKEKQELKEQITDDLLPRA
RDGC_NEIMB ADFTLRVALKKEEKVLPAGVIRDILEEKVAEIQNNEARNVGRKEKQELKEQITDDLLPRA
RDGC_NEIMA ADFTLRVALKKEEKVLPAGVIRDILEEKVAEIQNNEARNVGRKEKQELKEQITDDLLPRA
RDGC_ECOLI ANGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKTEKDSLKDEVLHSLLPRA
RDGC_ECO57 ANGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKTEKDSLKDEVLHSLLPRA
RDGC_SALTY ANGQIIICARKEEKILPSPVIKQALEAKIQKLEADQGRKLKKTEKDSLKDEVLHSLLPRA
RDGC_YERPE VNGQIVICARKEEKILPSPVIKQELQDKIERLEGEQHRKLKKTEKDSLKDEVLHSLLPRA
RDGC_VIBCH SENRILVCAKREEKMLPASVIKDSLNAKVEEMEAEEGRPLKKKEKDALKEDIVIDLLPRA
RDGC_HAEIN VGKQILLIAKKEEKILPANVVKRELDDRIESLEQKENRKLKKVEKQTLKDDVVMNLLPRA
RDGC_PASMU VGKQILLLAHKEEKILPAHVVKAELEQRIELLEQKENRKLKKVEKQALKDDVVSMLLPRA
RDGC_PSEAE SQDFFLISARKEERILPGSVVRDALKEKVDEIEAQQMRKVYKKERDQLKDEIVQTLLPRA
RDGC_XYLFA QGDFLWLTVGSEDKILPASVVNDLLTRKCSEIEEKKGHPPGGRERKRIKDDLIHELLPRA
RDGC_RALN1 INRQMLLVFRAEKKLLPASVVNQVTKARALEVEEQQGFKLGRKQLRELKEQVTDELLPRA
: : *.::**. *:. : :: .: : :*::: *****
RDGC_NEIG1 FTRSSRTEAVFNTRHGYLLVNNAASAKAENILTKLREALGGLEASLPNTKQSPSSLMTGW
RDGC_NEIMB FTRSSRTEAVFNTRHGYLLVNNAASAKAENILTKLREALGGLEASLPNTKQSPSSLMTGW
RDGC_NEIMA FTRSSRTEAVFNTRHGYLLVNNAASAKAENILTKLREALGGLEASLPNTKQSPSSLMTGW
RDGC_ECOLI FSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLSMENPIELTLTEW
RDGC_ECO57 FSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLSMANPIELTLTEW
RDGC_SALTY FSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLALENPIELTLTEW
RDGC_YERPE FSRFNQTFLWIDTVNDLIMVDAASAKRAEDTLALLRKSLGSLPVVPLTLENPIELTLTEW
RDGC_VIBCH FSKSQLTFVLIMPTEGLILVDAGSYKKAEDVLSLLRKTMGSLPVVPAIPEIAVETTLTQW
RDGC_HAEIN FSKNQHTALWIDTENNLIHIDAASSKRAEDALALLRKSLGSLPVVPLAFANEPSTILTNW
RDGC_PASMU FSKNQQTALWIDTENQLIYVDAASSKRAEDALALLRKSLGSLPVVPLSFANEPSVIMTDW
RDGC_PSEAE FIRRSSTFAAIAPSLGLILVDSASAKKAEDLLSTLREALGSLPVRPLSVKVAPTATLTDW
RDGC_XYLFA FVKKSRIDAMLDLRYGYVAVDTASRKAAETVISEIRDLLGSFPALPLNAEISIRSMLTSW
RDGC_RALN1 FTIRRDTRVWIDTANGWLVIDAAAQALGDDVRGLLVKSIDQLPLASVRVALSPVAAMTDW
* : : :: .: .: : . :. : :* *
RDGC_NEIG1 LLQGHCEGGFELDSDCELKGTGDIVPVVKVSKQDLTADEVVQHVKNGK-TVTRLGLVWRE
RDGC_NEIMB LLQGHCEGGFELDSDCELKGTGDIVPVVKVSKQDLTADEVVQHVKNGK-TVTQLGLVWRE
RDGC_NEIMA LLQGHCEGGFELDSDCELKGTGDIVPVVKVSKQDLTADEVVQHVKNGK-TVTQLGLVWRE
RDGC_ECOLI VRSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEEITNHIEAGK-VVTKLALDWQQ
RDGC_ECO57 VRSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEEITNHIEAGK-VVTKLALDWQQ
RDGC_SALTY VRSGTVAQGFQLLDEAELKAMLEDGGVIRAKKQDLVSDEIAVHIEAGK-VVTKLALDWQQ
RDGC_YERPE VRSKTLPAGFALMDEAELKAILEDGGVIRCKKQDLFSDEIAVHIEAGK-LVTKLALDWQE
RDGC_VIBCH VKDGNLPQGFSLMEEAELKSLLDDGATIRCKKQELSSDEILSHIQANK-VVTKLAINWQD
RDGC_HAEIN ILQDNLPHWLLALEEAELRGSQEDS-VIRCKKQPLENEEILALLQDGKKVVSKLALEWED
RDGC_PASMU INKDQTPAWLMPLEEAELTGSQDSG-IIRCKQQNLESDEIQTLLNAGK-FITKLSLAWEE
RDGC_PSEAE VKTQEAAGDFHVLDECELRDTHEDGGVVRCKRQDLTSEEIQLHLTAGK-LVTQLSLAWSD
RDGC_XYLFA IAGEPLPEHLNLGDECEMKDATEGGAIIKCQHQALRCEEIDKHLEVGK-QVSKLALILDD
RDGC_RALN1 LLSGEAPGGFTVDQDAELRSSGEGGATVRYVGHALEADDMRRHIEAGK-QCVRLAMTWDN
: : .:.*: : :: : * ::: : .* :*.: :
RDGC_NEIG1 QIAFILTQDFTLKRIQYLDVLQEEAES-NGDDAAGLAFASQILMAESVSTMLEELVSYLG
RDGC_NEIMB QIAFILTQDFTLKRIQYLDVLQEEAES-NGDDAAGLAFASQILMAESVSTMLEELVSYLG
RDGC_NEIMA QIAFILTQDFTLKRIQYLDVLQEEAES-NGDDAAGLAFASQILMAESVSIMLEELVSYLG
RDGC_ECOLI RIQFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQNLIEGLG
RDGC_ECO57 RIQFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQNLIEGLG
RDGC_SALTY RIQFVMCDDGSIKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQSLVEGLG
RDGC_YERPE RIQLVLSDDGSLKRLKFADTLRDQNEDIDREDFAQRFDADFILMTSELAALIKNLIEALG
RDGC_VIBCH RIRFVLAEDCSIKRLAYSDELKEQNDDIPHEDRAARLDADFSLLCGEMSVFLPDLFNALG
RDGC_HAEIN TLTFVFNEDCTIKRLKFADTVREKNDDILKEDFAQRFDADFVLMTGILAKLTENLLDEFG
RDGC_PASMU RLSFILNEDCTLKRLKFADQLREKNDDILKEDYAQRFDADFVLMTGVLTQLTANLLEEFG
RDGC_PSEAE KLSFVLDDKLAVKRLRFEDLLQEQAEKDGGEDALGQLDASFTLMMLTFAEFLPALFEALG
RDGC_XYLFA HVSFVLGDDLVIRKLKFLDGMLDQLEHSDTDGIRAELDARFALMSAEIRRLFLLLEVPLK
RDGC_RALN1 RISFVLTPSLTIKRVTPLDVIKEAADP-TAQNDDERFESDVALMTGELGRMLTDLVDILG
: ::: . :::: * : : : :. : *: . : * :
RDGC_NEIG1 GWQD---------
RDGC_NEIMB GWQD---------
RDGC_NEIMA GWQD---------
RDGC_ECOLI GEAQR--------
RDGC_ECO57 GEAQR--------
RDGC_SALTY GEAQR--------
RDGC_YERPE GEAQH--------
RDGC_VIBCH GLPHPEA------
RDGC_HAEIN GEKARL-------
RDGC_PASMU GEKARL-------
RDGC_PSEAE GEEIPQGV-----
RDGC_XYLFA LSKANN-------
RDGC_RALN1 GDQHDSMHQAAAA