CLUSTAL format seed alignment for MF_00319
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Features found in the protein:
- The following colors are used to highlight features:
- blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
- magenta is used to display DISULFID, THIOLEST and THIOETH.
- red is used for all other features, such as INIT_MET, ACTIVE SITE,
METAL,BINDING, NP_BIND, SITE, REGION, etc.
- The ID of the sequence used as the template for feature propagation is
underlined.
- A '<' at the beginning of a sequence or '>' at the end indicate that
the protein is fused with another domain either at the N- or C-terminus.
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CDH_ECOLI ------MKKAGLLFLVMIVIAVVAAGIGYWKLTGEES-----DTLRKIVLEECLPNQQQN
CDH_ECO57 ------MKKAGLLFLVMIVIAVVAAGIGYWKLTGEES-----DTLRKIVLEECLPNQQQN
CDH_HELPY ------MKKAGFLFLAVMAIVVMS-------LNAKDP-----NVLRKIVFEKCLPNYEKN
CDH_HELPJ ------MKKAGFLFLAAMAIIVVS-------LNAKDP-----NVLRKIVFEKCLPNYEKN
CDH_SALTI ------MKKTGYFLLAVIVIVAAA-GVGYWKFSG-NP-----DALREIVLERCLPDQLQH
CDH_SALTY ------MKKTGYFLLAVIVIVAAA-GVGYWKFSG-NP-----DALREIVLEQCLPDQLQH
CDH_ENTCL ------MKKIILLLLIVIALAAGG----VYWMKAGNP-----NALRHIVLDQCVPNQIQN
CDH_YERPE --MSRSIKWRRYLLTLLILIILAA--GLIYKLRFSNA-----DALWKIISQQCIPHMTTE
CDH_MYCLE MRRSIILVSVSV----AIAMLTGASIAEAEPMPPNNPSAATRDALWKIVHDRCELGYQHT
CDH_MYCTU MPKSRRAVSLSVLIGAVIAALAGALIAVTVPARPNRP-EADREALWKIVHDRCEFGYRRT
: . . :.* .*: :.*
CDH_ECOLI QNPSPCAEVKPNAGYVVLKDLNGPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARD
CDH_ECO57 QNPSPCAEVKPNAGYVVLKDLNGPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARD
CDH_HELPY QNPSPCIEVKPDAGYVVLKDINGPLQYLLMPTTHISGIESPLLLDPSTPNFFYLSWQARD
CDH_HELPJ QNPSPCIEVKPDAGYVVLKDINGPLQYLLMPTTHISGIENPLLLDPSTPNFFYLSWQARD
CDH_SALTI QNPAPCAEVKPRAGYVIFKDRHGPLQYLLMPTYRINGTESPLLLEPATPNFFWLAWQARG
CDH_SALTY QNPAPCAEVKPRAGYVVFKDRHGPLQYLLMPTYRINGTESPLLLEPATPNFFWLAWQARG
CDH_ENTCL RNPAPCAQVKTDAGYVVFKDRNGPLQYLLMPTYRINGTESPLLTEAHTPNFFWLAWQSRS
CDH_YERPE DDPRPCAEVNIPAGFAVLKDRNGPLQYLLIPTVPISGIESPQLLTATSPNYFADAWQARY
CDH_MYCLE GAYAPCTLVDEQAGTALFKANYDPNQYLLLPLARVTGIEDPALQELASPNYLYNAWAARG
CDH_MYCTU GAYAPCTFVDEQSGTALYKADFDPYQFLLIPLARITGIEDPALRESAGRNYLYDAWAARF
** *. :* .: * .* *:**:* :.* *.* * *:: :* :*
CDH_ECOLI FMSKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVRKQLDNNLANISSRWLPLP
CDH_ECO57 FMSKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLANISSRWLPLP
CDH_HELPY FMSKKYGQPIPDYAISLTINSSKGRSQNHFHIHISCISLEARKQLDNNLKKINSRWSPLP
CDH_HELPJ FMSKKYGKPIPDYAISLTINSKKGRSQNHFHIHISCISLDVRKQLDNNLKNINSRWSPLS
CDH_SALTI YMSKKYGHDIPDSAVSLAINSRLGRSQDHLHIHISCIRPDVREQLDNDLTRISTRWLPLP
CDH_SALTY YMSKKYGHDIPDSAVSLAINSRLGRSQDHLHIHISCIRPDVREQLDNDLTRISTRWLPLP
CDH_ENTCL FMTLKHGSEVPDSAISLTINSPTGRTQNHFHIHISCLRPDVREKLNAAQGEISTQWLPLP
CDH_YERPE FMAEKYGAPIDDTDISLAINSQYGRTQDQLHIHISCLKPQVKTALAAHSADFQQQWQPLP
CDH_MYCLE FVSSRLNNSLPEPDIFLAINPKNARTQDQLHIHISCVSPTTAEILKQVNWAEYVGWKPLP
CDH_MYCTU LVTARLNNSLPESDVVLTINPKNARTQDQLHIHISCSSPTTSAALRNVDTSEYVGWKQLP
:: : . : : : *:**. .*:*:::****** . * * *.
CDH_ECOLI GGLRGHEYLARRVTESELVQRSPFMMLAEEVPEAREHMGRYGLAMVRQSDNSFVLLATQR
CDH_ECO57 GGLRGHEYLARRVTESELVQRSPFMMLAEEVPEAREHMGSYGLAMVRQSDNSFVLLATQR
CDH_HELPY GGLNGHKYLARRVTESELVQKSPFVMLNKEVPNAYKRMGDYGLAVVQQSDNSFVLLATQF
CDH_HELPJ GGLNGHKYLARRVTESELAQKSPFVMLAKEVPNAHKRMGDYGLAVVQQSDNSFVLLATQF
CDH_SALTI GDLMGHEYLARRVTESELAQRSPFMMLAEEVPEARDHMGRYALAVVRQSDDSFVLLATER
CDH_SALTY GGLMGHEYLARRVTESELAQRSPFMMLAEEVPEARDHMGRYALAVVRQSDDSFVLLATER
CDH_ENTCL GGLEGHEYLARRVTENELVQRSPFMMLAEELPEARDHMGRFALAMAQQSDGSFVLLATER
CDH_YERPE GGLLGHDYWVRRITATELQQPGPFHLLADEMPGAKEQMGRYGLAITALPSGDFLLLANKA
CDH_MYCLE VTLQDHTYQALAVNRSTFESKSLFRDIQTKVTADGNTMDHASVAVANIAPDQFLLLVAEG
CDH_MYCTU IDLGGRRFQGLAVDTKAFESRNLFRDIYLKVTADGKKMENASIAVANVAQDQFLLLLAEG
* .: : : . : . . * : ::. . * .:*:. . ..*:** :
CDH_ECOLI NLLTLNRASAEEIQDHQCEILR------------
CDH_ECO57 NLLTLNRASAEEIQDHQCEILR------------
CDH_HELPY NPLTLNRASAEEIQDHECAILH------------
CDH_HELPJ NPLTLNRASAEEIQDHECAILR------------
CDH_SALTI NLLTLNRASAEEIQDHSCAILSSR----------
CDH_SALTY NLLTFNRASAEEIQDHSCAILSSR----------
CDH_ENTCL NLLTLNRASAEELQDHQCTILK------------
CDH_YERPE SLITQDRASAEELQDHTCQVLPHLPVQ-------
CDH_MYCLE TE--DQAIAAEELQDHNCSIAKRLTGQLDMETRR
CDH_MYCTU TE--DQPVAAETLQDHDCSITKS-----------
. : :** :*** * :