CLUSTAL format seed alignment for MF_00408

_____________________________________________________________________________

Features found in the protein:
The following colors are used to highlight features:
blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
magenta is used to display DISULFID, THIOLEST and THIOETH.
red is used for all other features, such as INIT_MET, ACTIVE SITE,
 METAL,BINDING, NP_BIND, SITE, REGION, etc.
The ID of the sequence used as the template for feature propagation is 
underlined.
A '<' at the beginning of a sequence or '>' at the end indicate that
 the protein is fused with another domain either at the N- or C-terminus.
_____________________________________________________________________________

TBP_AERPE       MSEEISFVKEIDTGVEGLPKPEVKIENIVATVILENQLDL--NLIETKIQDVDYNPDQFP
TBP_PYROC       --MESFVTPQRRSAAEQEPKPTANIENIVATVSLDQTLDL--NLIERSILTVEYNPEQFP
TBP_SULAC       -----------MIPDEIPYKAVVNIENIVATVTLDQTLDL--YAMERSVPNVEYDPDQFP
TBP_SULTO       ----------MTNIPEIPYKAVVNIENIVATVTLDQNLDL--YAMERSVPNVEYDPDQFP
TBP_SACSH       -----------MSNSAVSYKPIVNIENIVATVTLEQSLDL--YAMERSIPNIEYDPDQFP
TBP_SACS2       -----------MSNSAVSYKPIVNIENIVATVTLEQSLDL--YAMERSIPNIEYDPDQFP
TBP_PYRAE       ---------------MSSKGPSYRIENIVATVNLGVELDL--EQLAERLTMAEYNPDQFP
TBP_PYRAB       --------------MVDTNNVKLRIENIVASVDLFAQLDL--EKVLDICPNSKYNPEEFP
TBP_PYRHO       --------------MVDTSNVKLRIENIVASVDLFAQLDL--EKVLDICPNSKYNPEEFP
TBP_PYRFU       --------------MVDMSKVKLRIENIVASVDLFAQLDL--EKVLDLCPNSKYNPEEFP
TBP_THEKO       --------------MVDMSNVKLRIENIVASVDLFTDLNL--EKVIEICPSSKYNPEEFP
TBP_THECE       -----------------MSNVKLRIENIVASVDLFTQLNL--ERVIEMCPHSKYNPEEFP
TBP_METJA       ---------------MKIMEPEIKIVNVVVSTKIGDNIDL--EEVAMILENAEYEPEQFP
TBP_METTL       ------------------MEPEIKIVNVVVSTQIGTDIDL--EYAADILDNAEYEPEQFP
TBP_METTH       -----------------MTDVDIKIENIVASATLGKSIDL--QTVAEALENVDFNREQFP
TBP1_METAC      -----------------MSESSIKIENVVASTKLAEEFDL--TVIESEFEGAEYNKQKFP
TBP2_METMA      -----------------MSESSIKIENVVASTKLAEEFDL--TVIESQFEGAEYNKQKFP
TBP1_METMA      -----------------MSESSIKIENVVASTKLAEEFDL--TVIESEFEGAEYNKQKFP
TBP3_METAC      ------------------MESTITIENVVASTALATEFDLV-KIMDSGLEGAEYNKTKFP
TBP3_METMA      ------------------MESTITIENVVASTRLAEDFDLE-KMMESGLEGAEYNKVKFP
TBP2_METAC      ------------------MEPTITIENIVASTRLAEDFDLQ-KLLDTGLKGAVYNKNKFP
TBP_ARCFU       -----------------MQDYKIKIENVVASTQIGENIDL--NKISREIKDSEYKPKQFP
TBPB_HALSA      ---------------MSTLADTIHIENVVASSDLGQELAL--DQLSTDLPGAEYNPEDFP
TBPF_HALSA      ---------------MSSLADTIHIENVVASSDLGQELAL--DQLATDLDGAEYNPEDFP
TBPD_HALSA      ---------------MSTLTDTIQIENVVASTDLSQELAL--EQLATDLPGAEYNPGDFP
TBPE_HALSA      ---------------MTDPKETINIENVVASTGIGQELDL--QSVAMDLEGADYDPEQFP
TBP_THEAC       ----------------MSEREKITIENIVASTSLAEHLDL--SRIALALDGSEYEPEQFP
TBP_THEVO       ----------------MSEREKITIENIVASTSLAEHLDL--SRIALALDGSEYEPEQFP
TBP_METKA       ----------------------MEIQNIVASVDLKGEVNL---DECSVILQGEYEPEQFP
TBPC_HALSA      --------------------MTVEIANIVGSGDLGVELDVEPLEADLSTPYSEYDPSNYH
TBP_CENSY       ---------------MLDPRTRPRVVNVVSTSDLVQRVSA---KKMAAMPCCMYDEAVYG
                                        : *:* :  :   .               :.   : 

TBP_AERPE       GLVYRLESPRV--TVLIFKSGKMVITGAKSINQLIHVVKKLLKAF-ADQGIPISG-KPQI
TBP_PYROC       GLVYRLDSPKV--TALIFKSGKMVVTGAKSTRDLIEAVKKIVRNL-KKHGIQIYG-RPKV
TBP_SULAC       GLIFRLESPKI--TSLIFKSGKMVVTGAKSTDELIKAVKRIIKTL-KKYGMQLTG-KPKI
TBP_SULTO       GLIFRLEAPKV--TSLIFKSGKMVVTGAKSTDELIKAVKRIIKTL-KRYGMNLTG-KPKI
TBP_SACSH       GLIFRLEQPKV--TALIFKSGKMVVTGAKSTEELIKAVKRIIKTL-KKYGIKIMG-KPKI
TBP_SACS2       GLIFRLEQPKV--TALIFKSGKMVVTGAKSTEELIKAVKRIIKTL-KKYGIKIVG-KPKI
TBP_PYRAE       GLILRLTKPRI--SALIFRTGKMVCTGAKNEEDLKNAVRALVKLL-KDHGADVPF-DPEV
TBP_PYRAB       GIICRFDDPKV--ALLIFSSGKLVVTGAKSIHDIERAVAKLIEKL-KGIGVKFKR-APLI
TBP_PYRHO       GIICRFDDPKV--ALLIFSSGKLVVTGAKSIQDIERAVAKLIQKL-KGIGVKFKR-APLI
TBP_PYRFU       GIICHLDDPKV--ALLIFSSGKLVVTGAKSVQDIERAVAKLAQKL-KSIGVKFKR-APQI
TBP_THEKO       GIICRFDDPKV--ALLIFSSGKLVVTGAKSVDDIKRAVYKLIEML-KKIGAKFTR-EPQI
TBP_THECE       GIICRFDEPKV--ALLIFSSGKLVVTGAKSVEDIERAVNKLIQML-KKIGAKFSR-APQI
TBP_METJA       GLVCRLSVPKV--ALLIFRSGKVNCTGAKSKEEAEIAIKKIIKEL-KDAGIDVIE-NPEI
TBP_METTL       GLVCRLSDPKV--ALLIFRSGKLNCTGAKSKEDAEIAIKKIIKEL-KDAGMDIID-NPEV
TBP_METTH       GLVYKLKEPKT--AALIFGSGKLVCTGAKSIEDSKRAIKLTVDMM-RTMDPDIPE-EFEI
TBP1_METAC      GLVYRVSDPKA--AFLVFTSGKVVCTGAKNVADVHTVIGNMAKKL-NSIGIKTME-NPQI
TBP2_METMA      GLVYRVSDPKA--AFLVFTSGKVVCTGAKNVADVHTVIGNMAKKL-NSIGIKTME-NPQI
TBP1_METMA      GLVYRVSDPKA--AFLVFTSGKVVCTGTKNVADVHTVVGNLAKKL-NSIGIKTIE-NPQI
TBP3_METAC      GLVYRIDNPKA--AFLIFTSGKVVCTGAKTINNAHKAITNLANKL-KDIGCDKINLEPEI
TBP3_METMA      GLVYRINNPKA--AFLIFTSGKVVCTGSKSIGNAHAAIINLANTL-KSICCEKIDLEPDV
TBP2_METAC      GLVYRIENPKA--AFLIFASGKVVCTGTKNVENSRIALFNLANEL-NSIGYKGIYLKPEI
TBP_ARCFU       GLVLRTKEPKA--AALVFRSGKVVCTGSKSVEDARRAVKQIVKML-KEIGISVID-EPEV
TBPB_HALSA      GVVYRLQEPKS--ATLIFRSGKVVCTGAKSVDDVHEALGIVFGDI-RELGIDVTS-NPPI
TBPF_HALSA      GVVYRLQEPKS--ATLIFRSGKVVCTGAKSVDAVHDALEIVFDDL-RELGIDVDS-TPPV
TBPD_HALSA      GVIYRLDDPKS--ATLIFDSGKAVCTGAQSVDDVHDAISIVVEDL-RDLGIDIPP-SPPV
TBPE_HALSA      GLVYRTQDPKS--AALIFRSGKIVCTGAKSTDDVHESLRIVFDKL-RELSIKVED-DPEI
TBP_THEAC       GLIYRLQEPKT--AVLIFRSGKVNCTGAKNIEDVKRTIKIIIDKL-KAADIEVYD-DPQI
TBP_THEVO       GLIYRLQDPKT--AVLIFRSGKVNCTGAKNIEDVKRTIKIIIDKL-KAANIEVYD-DPDI
TBP_METKA       GLVYRLEDIGT--VVLIFRSGKMVCTGAKNREQIYKSVERVREDLEKKCGVKFHG-EPEV
TBPC_HALSA      GLYVRLEENGP--LITVYRSGKYIITGCASMESLHETNEEFLGML-ADLGVTEEDTQTGF
TBP_CENSY       GRCGYIKTPGMQGRVTVFISGKMISVGARSVRASFGQLHEARLHLVRNGAAGDCK--IRP
                *               :: :**   .*  .              :               

TBP_AERPE       QIQNIVASANLKVYIDLEKAALEF------ENSLYEPEQFPGLIYRMDEPRVVMLIFSSG
TBP_PYROC       QIQNIVASANLNVCVDLERAALTL------ENSMYEPEQFPGLIHRMDEPRVVLLIFSSG
TBP_SULAC       QIQNIVASANLHVIVNLDKAAFLL------ENNMYEPEQFPGLIYRMDEPRVVLLIFSSG
TBP_SULTO       QIQNIVASANLHVIVNLDKAAFLL------ENNMYEPEQFPGLIYRMEDPRVVLLIFSSG
TBP_SACSH       QIQNIVASANLHVNVNLDKAAFLL------ENNMYEPEQFPGLIFRMDDPRVVLLIFSSG
TBP_SACS2       QIQNIVASANLHVNVNLDKAAFLL------ENNMYEPEQFPGLIFRMDDPRVVLLIFSSG
TBP_PYRAE       QIQNIVASGNLHAEVDLEQAVLML------ENAMYEPEQFPGLIYRMSSPRVVILIFGSG
TBP_PYRAB       DIQNMVFSGDIGREFNLDNVALTL------PNCEYEPEQFPGVIYRVKDPRAVILLFSSG
TBP_PYRHO       DVQNMVFSGDIGREFNLDNVALTL------PNCEYEPEQFPGVIYRVKEPRAVILLFSSG
TBP_PYRFU       DVQNMVFSGDIGREFNLDVVALTL------PNCEYEPEQFPGVIYRVKEPKSVILLFSSG
TBP_THEKO       DIQNMVFSGDIGMEFNLDAVALIL------PNCEYEPEQFPGVIYRVKEPRAVILLFSSG
TBP_THECE       DIQNMVFSGDIGMEFNLDAVALSL------PNCEYEPEQFPGVIYRVKEPRAVILLFSSG
TBP_METJA       KIQNMVATADLGIEPNLDDIALMV------EGTEYEPEQFPGLVYRLDDPKVVVLIFGSG
TBP_METTL       NVQNMVATADLGIEPNLDDISTL-------EGTEYEPEQFPGLVYRLSDPKVVVLIFGSG
TBP_METTH       KIQNIVASANLGKPLNLEAVALGL------ENTEYEPEQFPGLVYRLDDPKVVLLLFGSG
TBP1_METAC      TVQNIVASADLHTILNLNAIAIGLG----LENIEYEPEQFPGLVYRIDEPKVVVLIFSSG
TBP2_METMA      TVQNIVASADLHTILNLNAIAIGLG----LENIEYEPEQFPGLVYRIDEPKVVVLIFSSG
TBP1_METMA      TVQNIVASADLHTILNLNAIAIGLG----LENIEYEPEQFPGLVYRIDEPKVVVLIFSSG
TBP3_METAC      HVQNIVASADLKTTLNLNTIAIAFG----LENVEYEPEVFPGLIYRVEAPKVVVLVFSSG
TBP3_METMA      RVQNIVASADLKTNLNLNTIAIAFG----LENVEYEPEVFPGLIYRVEAPKVVVLVFSSG
TBP2_METAC      HVQNVVASANLRTSLNLNAVLSAFG----VENVEYEPEVFPGLVYKLADPRVVVLVFRTG
TBP_ARCFU       KVQNIVASADLGVDLNLNAIAIGLG----LENIEYEPEQFPGLVYRLDNPRVVVLIFGSG
TBPB_HALSA      EVQNIVSSASLEQSLNLNAIAIGLG----LEQIEYEPEQFPGLVYRLDDPDVVVLLFGSG
TBPF_HALSA      KVQNIVSSASLEQSLNLNAIAIGLG----LEQIEYEPEQFPGLVYRLDDPDVVVLLFGSG
TBPD_HALSA      HVQNIVCSGSLDQDLNLNAIAIGLG----LEDVEYEPEQFPGLVYRLNDPDVVVLLFGSG
TBPE_HALSA      VVQNIVTSADLGRQLNLNAIAIGLG----LENIEYEPEQFPGLVYRLDDPEVVALLFGSG
TBP_THEAC       IVQNIVAVYDLESELNLTDIAMSLG----LENVEYEPEQFPGLVYRVEEPRVVLLLFGSG
TBP_THEVO       IVQNIVAVYDLESELNLTDIAMSLG----LENVEYEPEQFPGLVYRVEEPRVVLLLFGSG
TBP_METKA       EIQNIVASIDFHVPLDLDTIAEVLVGDEDVEGIEYEPEQFPGLVLRLREPKVAMLLFYSG
TBPC_HALSA      TVENVVCTAMLDELVSLNALAIGLG----LEVTEYEPEQFPGLVYRPEEIGAVLLVFANG
TBP_CENSY       VVRNIVATVDAGRNVPIDRISSRMP------GAVYDPGSFPGMILKGLDS-CSFLVFASG
                 :.*:*          :                 *:*  ***:: :        *:* .*

TBP_AERPE       KMVITGAKMENEVYDAVKKVARKLKEADAIIGIAE-----------
TBP_PYROC       KMVITGAKREEEVYEAVNKIYEKLKKLRAIRPC-------------
TBP_SULAC       KMVITGAKREDEVHKAVKKIFDKLVELDCVKPVEEEE-LEF-----
TBP_SULTO       KMVITGAKREEEVHKAVKKIFDKLVELDCVKPFEEEE-LEF-----
TBP_SACSH       KMVITGAKREDEVSKAVKRIFDKLAELDCVKPIEEEEELEL-----
TBP_SACS2       KMVITGAKREDEVSKAVKRIFDKLAELDCVKPIEEEEELEL-----
TBP_PYRAE       KIVCTGAKSEKDVATAVQKLYNQLKELGVLYVEEGGEELEEFEEEL
TBP_PYRAB       KIVCSGAKSEADAWEAVRKLLRELEKYGLIEE-EEEEL--------
TBP_PYRHO       KIVCSGAKSEADAWEAVRKLLRELEKYGLIEE-EEEEL--------
TBP_PYRFU       KIVCSGAKSEADAWEAVRKLLRELDKYGLLEE-EEEEL--------
TBP_THEKO       KIVCSGAKSEQDAWEAVKKLLRELEKYGLIEE--EEEW--------
TBP_THECE       KIVCSGAKSEHDAWEAVRKLLRELEKYDLIGEGEEEEW--------
TBP_METJA       KVVITGLKSEEDAKRALKKILDTIKEVQEL----------------
TBP_METTL       KVVITGLKKKDDAYLALDKILSTLKELEEEYY--------------
TBP_METTH       KVVCTGAKSAEDAKLGVEKTKARLAELDLI----------------
TBP1_METAC      KLVVTGGKSPEDCERGVEVVRQQLDNMGLL----------------
TBP2_METMA      KLVVTGGKTPEDCESGVEVVRQQLDNMGLL----------------
TBP1_METMA      KLVVAGGKSPEDCERSVEVVRQQLDSMGLL----------------
TBP3_METAC      KLVITGGKCEEDCNGGLRIVRKEFDNLGLLC---------------
TBP3_METMA      KLVITGGKCPEDCEEGLRIVKTEFDNLGLLY---------------
TBP2_METAC      KLVITGGKCPEDCEEGLRIIKTQLDNLGLLY---------------
TBP_ARCFU       KMVVTGGKSPEDARKAVERISEELRTLGLM----------------
TBPB_HALSA      KLVITGGQNPDEAEQALAHVQDRLTELGLLD---------------
TBPF_HALSA      KLVITGAAESADAQHALAHVNDRLTELGLLE---------------
TBPD_HALSA      KLVITGGSNPDDAHHALEIIHERLTDLGLLE---------------
TBPE_HALSA      KLVITGGKEPKDAEHAVDKITSRLEELGLLD---------------
TBP_THEAC       KVVCTGAKEESEIEQAVIKVKKELQKVGLI----------------
TBP_THEVO       KVVCTGAKEESEIEQAVIKVKKELQKVGLI----------------
TBP_METKA       KAVCTGAKTEEEPEKAVKKIAEKIEKYGLKLTG-------------
TBPC_HALSA      KMVITGAKDTETAESAYEYFQSKVQELV------------------
TBP_CENSY       KMVIAGAKSPDELRRSSFDLLTRLNNAGA-----------------
                * * :*         .       .