CLUSTAL format seed alignment for MF_00436
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Features found in the protein:- The following colors are used to highlight features:
- blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
- magenta is used to display DISULFID, THIOLEST and THIOETH.
- red is used for all other features, such as INIT_MET, ACTIVE SITE,
METAL,BINDING, NP_BIND, SITE, REGION, etc.
- The ID of the sequence used as the template for feature propagation is
underlined.
- A '<' at the beginning of a sequence or '>' at the end indicate that
the protein is fused with another domain either at the N- or C-terminus.
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HFQ_BRADU -----------MAADRAQNLQDTFLNHVRKTKTPLTIFLVNGVKLQGIVTWFDNFCLLLR
HFQ_CAUVC -----------MSAEKKQNLQDTFLNSVRKSKTPLTIFLVNGVKLQGVVSWFDNFCVLLR
HFQ_CERS4 -----------MAADK-QNLQDAFLNHVRKAKVPVTIFLINGVKLQGVITWFDNFCVLLR
HFQ_AGRFC ------------MAERSQNLQDLFLNTVRKQKISLTIFLINGVKLTGVVTSFDNFCVLLR
HFQ_RHORT -----------MPAEKTQNVQDVFLNYIRKNKAPVTIFLVNGVKLQGIVTWFDNFSLLLR
Q5NQN3_ZYMMO ------------MAEKVNNLQDFFLNTLRKTRTPVTMFLVKGVKLQGVITWFDNFSILLR
HFQ_BACAN ------------MKQS-INIQDQFLNQLRKENTFVTLYLLNGFQLRGLIKGFDNFTVLLE
HFQ_BACCR ------------MKQS-INIQDQFLNQLRKENTFVTLYLLNGFQLRGLIKGFDNFTVLLE
HFQ_BACSU -------------MKP-INIQDQFLNQIRKENTYVTVFLLNGFQLRGQVKGFDNFTVLLE
Q92C58_LISMO ------------MKQGGQGLQDYYLNQLRKEKILATVFLTNGFQLRGRVVSFDNFTVLLD
HFQ_CLOAB -----------MNNKSTNNLQDIFLNSARKNKIPVAIHLTNGFQMRGSVKGFDSFTVILE
HFQ_CLOBH ------------MTKVVNNLQDIFLNGARKNRIPVTIYLTNGFQLKGFVKGFDNFTVILD
HFQ_MOOTA ------------MNKTQGNLQDLFLNVLRRDNTPVTIYLVNGFQLKGVVRGFDNFTVVLD
HFQ_BORPE ---------MSNKGQTL---QDPFLNTLRKEHVPVSIYLVNGIKLQGQIESFDQYVVLLR
HFQ_BURPS ---------MSNKGQLL---QDPFLNALRKEHVPVSIYLVNGIKLQGNIESFDQYVVLLR
HFQ_NEIG1 ---------MTAKGQML---QDPFLNALRKEHVPVSIYLVNGIKLQGQVESFDQYVVLLR
HFQ_NEIMB ---------MTAKGQML---QDPFLNALRKEHVPVSIYLVNGIKLQGQVESFDQYVVLLR
HFQ_ECOLI ----------MAKGQSL---QDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLK
HFQ_SHIDS ----------MAKGQSL---QDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLK
HFQ_SALTY ----------MAKGQSL---QDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLK
HFQ_YERPE ----------MAKGQSL---QDPFLNALRRERVPVSIYLVNGIKLQGQVESFDQFVILLK
HFQ_PSEAE ----------MSKGHSL---QDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLK
HFQ_VIBCH ----------MAKGQSL---QDPFLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLK
HFQ_ALIF1 ----------MAKGQSL---QDPFLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLK
HFQ_HAEIN ----------MAKGQSL---QDPYLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLK
HFQ_SHEON ----------MAKGQSL---QDPFLNALRRERVPVSIYLVNGIKLQGQVESFDQFVILLK
HFQ_XANCP ----------MAKGQSL---QDPFLNALRRERVPVSVYLVNGIKLQGTIESFDQFVVLLR
HFQ_FRATT ----------MSRISSL---QDPFLNALRKEKVSVSVYLVNGIKLQGQVEAFDQFCIVLR
HFQ_HAMD5 ----------MAKGQSL---QDPFLNALRKERIPVSIYLINGIKLQGQIESFDQFVILLK
B2JKR6_PARP8 ----------MPSAESHP--QNDFMNAARKERKRVEIYLVNGIRLTGCIESFDQYLVMLR
Q74BP2_GEOSL ---------MAKAPFNI---QDQYLNQSRKERIKVAVRLMSGEKLEGYIKSFDNFSVLME
B3E5Z0_TRIL1 ---------MSKAPFNI---QDQYLNQSRKERVKVVVRMMSGEALEGHIKSFDNFSLLLD
C4LB11_TOLAT MTSETQNYTSLEQAFSLGNGQDAALNWLRKSHTNVAIFLVSGIKLEGVISGFDQYSVLLT
Q1IIF9_KORVE --------MENKPAQNI---QDSFLNTARKDKTIVTIYLLSGVKLTGRIRSFDKYSVVLD
HFQ_THEMA --------MALAEKFNL---QDRFLNHLRVNKIEVKVYLVNGFQTKGFIRSFDSYTVLLE
A9BHX0_PETMO ----------MAEKFNL---QDRFLNILRINKIEVKIYLEGGFQTSGVVRSFDDYTVLLG
Q2FYZ1_STAA8 ----------MIANENI---QDKALENFKANQTEVTVFFLNGFQMKGVIEEYDKYVVSLN
B4U9V4_HYDS0 ------------MTENL---QDKILEDAKEKGIEVVIYLTRGNRMVGKVLDQDKYTVLLK
HFQ_AQUAE ------------MPYKL---QESFLNTARKKRVKVSVYLVNGVRLQGRIRSFDLFTILLE
HFQ_LEPIN ----------MSAKNNI---QDQLLNTARKDKLDLTIYLLNGVPLKGKVVSFDNFTIVLE
A0A243BM97_BACTU --------------MYLEHLQDELYKQIKEEKGIVTIFLKSGVRIVGEIVAIDKFTVLML
Q81FG7_BACCR ----------------MEHLQEELYKQIKEEKGTVTIFLKSGVRIIGEVVGVDKFTLLIL
Q9X393_BACAN -----------------MHTQEDFYNKLIEEQRLVTIFLINGVRVPGIIIAVDKFSVLVS
B7JTR0_BACC0 -MKTKLQSFQKDRSKNMLFSQEYLLQEAFQKRKNIMLILLKGLHIKGIIRGYDIFSILIE
*: : : : * * : * : : :
HFQ_BRADU RDG------HSQLVYKHAISTIMP-------------------GAPIQLFEGGEDQPA--
HFQ_CAUVC RDG------QSQLVYKHAISTIMP-------------------AQPVQLYEPSADADD--
HFQ_CERS4 RDG------QSQLVYKHAISTIMP-------------------GQPINLYE-GDD-----
HFQ_AGRFC RDG------HSQLVYKHAISTIMP-------------------GQPMQMFESEEGAA---
HFQ_RHORT RDG------HTQLVYKHAISTIMP-------------------ASPVQLFEPTKEEVEA-
Q5NQN3_ZYMMO RDG------QSQLVYKHAISTIIP-------------------AHPLEQLRESRSLMAER
HFQ_BACAN TEG------KQQLIYKHAISTFVP-------------------QKNVSIELE--------
HFQ_BACCR TEG------KQQLIYKHAISTFVP-------------------QKNVSIELE--------
HFQ_BACSU SEG------KQQLIYKHAISTFAP-------------------QKNVQLELE--------
Q92C58_LISMO VEG------KQQLVFKHAISTFSP-------------------QKNVALNPDAE------
HFQ_CLOAB SDG------KQMMIYKHAVSTITP-------------------LRPILFNQ-PQ----QD
HFQ_CLOBH SDG------KQMMIYKHAISTINP-------------------AKPLLFVQNPNGDDYKD
HFQ_MOOTA ADG------KQQMIYKHAISTIMP-------------------FRPVNLMAESRAQA-EA
HFQ_BORPE NT-------VTQMVYKHAISTVVP-------------------ARAVNFQVE--------
HFQ_BURPS NT-------VTQMVYKHAISTVVP-------------------ARPVNFHPD--------
HFQ_NEIG1 NTS------VTQMVYKHAISTIVP-------------------ARSVNLQHENK------
HFQ_NEIMB NTS------VTQMVYKHAISTIVP-------------------ARSVNLQHENR------
HFQ_ECOLI NT-------VSQMVYKHAISTVVP-------------------SRPVSHHSNNAGGGTSS
HFQ_SHIDS NT-------VSQMVYKHAISTVVP-------------------SRPVSHHSNNAGGGTSS
HFQ_SALTY NT-------VSQMVYKHAISTVVP-------------------SRPVSHHSNNAGGGASN
HFQ_YERPE NT-------VSQMVYKHAISTVVP-------------------SRPVSHHSNTPSG-STN
HFQ_PSEAE NT-------VSQMVYKHAISTVVP-------------------SRPVRLPS---------
HFQ_VIBCH NT-------VNQMVYKHAISTVVP-------------------ARPVSHHSG--------
HFQ_ALIF1 NT-------VNQMVYKHAISTVVP-------------------ARAVSHHSAS-------
HFQ_HAEIN NT-------VNQMVYKHAISTVVP-------------------ARSVSHHNNN-------
HFQ_SHEON NT-------VSQMVYKHAISTVVP-------------------ARPFNVAGHQ-------
HFQ_XANCP NT-------VSQMVYKHAISTVVP-------------------ARNVRVGPGGG------
HFQ_FRATT NT-------VNQMVYKHAISTIVP-------------------AKSVRMIYNSFNPYHQN
HFQ_HAMD5 STSPSLKNTICQVIYKHAVSTVVP-------------------SRAVSSSPH--------
B2JKR6_PARP8 TPV------GLQGIYKRAISTIQLDTGSRPAPRAGRPSHGDHSARGPHGSREHREPREPR
Q74BP2_GEOSL IQGD-------MLIYKHAITSITSV------------------DGHFRLHQ---------
B3E5Z0_TRIL1 TGGD-------ILIYKHAIATITSV------------------DGTFRLHHHP-------
C4LB11_TOLAT DAHNN-----QQMIYKAKISTIAPLGNRVS-------------SNTFQRRRPPR------
Q1IIF9_KORVE TNN------QEQLIFKHAISTVVL-------------------PRPAHGADVRH------
HFQ_THEMA SGN------QQSLIYKHAISTIIP-------------------SSYVMLMPKK-------
A9BHX0_PETMO KNG------EQSLVYKHAVKMMVP-------------------SKYIKLF----------
Q2FYZ1_STAA8 SQG------KQHLIYKHAISTYT-------------------------------------
B4U9V4_HYDS0 SDS------GTNLIYKHAISTIV-------------------------------------
HFQ_AQUAE DGK------QQTLVYKHAITTIVP-------------------HERLEIE----------
HFQ_LEPIN QEN------KQSLVYKHAISTIIP-------------------AKIIKLY----------
A0A243BM97_BACTU VDG------KQQLIYKQAISTIMK------------------------------------
Q81FG7_BACCR VDG------KQQLIYKQAISTIMK------------------------------------
Q9X393_BACAN SHG------KQQFIYKHAISTVSL------------------------------------
B7JTR0_BACC0 YEG------KQQLVYKHAISTIRF------------------------------------
::* :
HFQ_BRADU ------------------------------------------------------------
HFQ_CAUVC ------------------------------------------------------------
HFQ_CERS4 ------------------------------------------------------------
HFQ_AGRFC ------------------------------------------------------------
HFQ_RHORT ------------------------------------------------------------
Q5NQN3_ZYMMO KSSLLQDVFLSAIMQQQEPVTMFLINGVMLQGEIAAFDLFCVLLTRNDDAQLVYKHAVST
HFQ_BACAN ------------------------------------------------------------
HFQ_BACCR ------------------------------------------------------------
HFQ_BACSU ------------------------------------------------------------
Q92C58_LISMO ------------------------------------------------------------
HFQ_CLOAB EE----------------------------------------------------------
HFQ_CLOBH KE----------------------------------------------------------
HFQ_MOOTA KQ----------------------------------------------------------
HFQ_BORPE ------VPAE--------------------------------------------------
HFQ_BURPS ------AEAAS-------------------------------------------------
HFQ_NEIG1 ---PQAAPASTLVQVETVQQPAE-------------------------------------
HFQ_NEIMB ---PQAAPTSTLVQVETVQQPAE-------------------------------------
HFQ_ECOLI NYHHGSSAQNTSAQQDSEETE---------------------------------------
HFQ_SHIDS NYHHGSSPQNTSAQQDSEETE---------------------------------------
HFQ_SALTY NYHHGSNAQGSTAQQDSEETE---------------------------------------
HFQ_YERPE NYHGSNPSAPQQPQQDSDDAE---------------------------------------
HFQ_PSEAE ---GDQPAEPGNA-----------------------------------------------
HFQ_VIBCH -----DRPASDRPAEKSEE-----------------------------------------
HFQ_ALIF1 -----DRPQGERPQEKTEE-----------------------------------------
HFQ_HAEIN -----HHTAPTEAVENVETQAE--------------------------------------
HFQ_SHEON -----NAQGGYGAQDDMPSGE---------------------------------------
HFQ_XANCP ---YVQSNENNQAEDDDVEQ----------------------------------------
HFQ_FRATT SNDEQDENVDDIHSDDLEIQENEGNIHE--------------------------------
HFQ_HAMD5 -----HAPPLQKPEDDGS------------------------------------------
B2JKR6_PARP8 ESYGGSQGSSDRSSSSSSDGPVVVTRRRRLYGAGNGNDQGNNGGGHGE------------
Q74BP2_GEOSL ------------------------------------------------------------
B3E5Z0_TRIL1 ------------------------------------------------------------
C4LB11_TOLAT ---YQNENPENPGSSSGGNTD---------------------------------------
Q1IIF9_KORVE ----SDAKPVGTTSPATQTTEG--------------------------------------
HFQ_THEMA ------QETAQEAETSENEGS---------------------------------------
A9BHX0_PETMO ------QEPPSKDE----------------------------------------------
Q2FYZ1_STAA8 ------VETEGQASTESEE-----------------------------------------
B4U9V4_HYDS0 ------IEEASEN-----------------------------------------------
HFQ_AQUAE ------FEEAGVP---GQG-----------------------------------------
HFQ_LEPIN ------TEEAKDNKDAAQG-----------------------------------------
A0A243BM97_BACTU ------------------------------------------------------------
Q81FG7_BACCR ------------------------------------------------------------
Q9X393_BACAN ------------------------------------------------------------
B7JTR0_BACC0 ------------------------------------------------------------
HFQ_BRADU ------------------
HFQ_CAUVC ------------------
HFQ_CERS4 ------------------
HFQ_AGRFC ------------------
HFQ_RHORT ------------------
Q5NQN3_ZYMMO VQPVKSVDLTMTERRDED
HFQ_BACAN ------------------
HFQ_BACCR ------------------
HFQ_BACSU ------------------
Q92C58_LISMO ------------------
HFQ_CLOAB ------------------
HFQ_CLOBH ------------------
HFQ_MOOTA ------------------
HFQ_BORPE ------------------
HFQ_BURPS ------------------
HFQ_NEIG1 ------------------
HFQ_NEIMB ------------------
HFQ_ECOLI ------------------
HFQ_SHIDS ------------------
HFQ_SALTY ------------------
HFQ_YERPE ------------------
HFQ_PSEAE ------------------
HFQ_VIBCH ------------------
HFQ_ALIF1 ------------------
HFQ_HAEIN ------------------
HFQ_SHEON ------------------
HFQ_XANCP ------------------
HFQ_FRATT ------------------
HFQ_HAMD5 ------------------
B2JKR6_PARP8 ------------------
Q74BP2_GEOSL ------------------
B3E5Z0_TRIL1 ------------------
C4LB11_TOLAT ------------------
Q1IIF9_KORVE ------------------
HFQ_THEMA ------------------
A9BHX0_PETMO ------------------
Q2FYZ1_STAA8 ------------------
B4U9V4_HYDS0 ------------------
HFQ_AQUAE ------------------
HFQ_LEPIN ------------------
A0A243BM97_BACTU ------------------
Q81FG7_BACCR ------------------
Q9X393_BACAN ------------------
B7JTR0_BACC0 ------------------