CLUSTAL format seed alignment for MF_00501
_____________________________________________________________________________
Features found in the protein:
- The following colors are used to highlight features:
- blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
- magenta is used to display DISULFID, THIOLEST and THIOETH.
- red is used for all other features, such as INIT_MET, ACTIVE SITE,
METAL,BINDING, NP_BIND, SITE, REGION, etc.
- The ID of the sequence used as the template for feature propagation is
underlined.
- A '<' at the beginning of a sequence or '>' at the end indicate that
the protein is fused with another domain either at the N- or C-terminus.
_____________________________________________________________________________
RL31_CAMJE -MKKEIHPEY-VECKVSCAC-GNTFTTKSNK--AE--LRVDICSNCHPFFTGSEK----I
RL31_CLOAB -MQKDIQPEYHQDAVVKCAC-GNTFTTGSTK--KE--LKVDICSKCHPFFTGQQK----I
RL31_MYCLE -MKANIHPAY-AETTVVCGC-GNTFQTRSTKPGGR--IVVEVCSQCHPFYTGKQK----I
RL31_MYCTU -MKSDIHPAY-EETTVVCGC-GNTFQTRSTKPGGR--IVVEVCSQCHPFYTGKQK----I
RL31_STRCO -MKRDIHPEY-VETQVSCTC-GASFTTRSTIESGT--IRAEVCSECHPFYTGKQK----I
RL31_AQUAE -MKKGIHPEL-KPTTFVCGC-GNTFTLLSTK-GGT--VYLEVCNQCHPFYAGKLK----I
RL31_ECOLI -MKKDIHPKY-EEITASCSC-GNVMKIRSTVGHD---LNLDVCSKCHPFFTGKQR----D
RL31_YERPE -MKQGIHPKY-EQVTASCSC-GNVIKINSTVGHD---LNLDVCGECHPFYTGKQR----D
RL31_HAEDU -MKQGIHPEY-KEITATCSC-GNVIKTRSTVEKN---LNLDVCGNCHPFYTGKQR----V
RL31_HAEIN -MKQGIHPEY-KEITATCSC-GNVIKTRSTLGKD---INLDVCGNCHPFYTGKQR----V
RL31_PASMU -MKQGIHPNY-VEVTATCSC-GNVIKTRSTVGKD---LNLDVCGNCHPFYTGKQR----V
RL31_BUCAI -MKKKIHPRY-SKITATCSC-GNIIEIFSTINHN---LNLDICAKCHPFYTGKQR----V
RL31_PSEAE -MKADIHPTY-EAIEATCSC-GNVIKTRSTLCKP---IHLDVCSECHPFYTGKQK----V
RL31_VIBCH -MKAGIHPEY-KAVNATCSC-GNSFVFNSTLGKDT--MHLDVCDKCHPFYSGKQR----I
RL31_NEIMA -MKQGIHPNY-HEVNVTCSC-GNKFATKSAMEKEN--FNIEVCSLCHPFYTGTQK----I
RL31_TREPA -MKKGLHPRY-EETKVVCAC-GNVIVTASTV-KD---LRVEICSACHPFFTGKQK----L
RL31_BACSU -MKAGIHPNF-KKATVKCAC-GNEFETGSVK--EE--VRVEICSECHPFYTGRQK----F
RL31_THEMA -MKKGIHPEM-KLVTVKCAC-GAEHTFYTTV--DN--IRIDVCSNCHPFYTSGGKGGVLI
RL31_HELPY -MKKGIHPEY-IPCKVTCVTSGKEIEVLSTK--PE--MRIDISSFCHPFYTGSDK----I
RK31_GUITH MPKQNLHPKWYAEAKVYCD--GQLIMTIGSTKSE---LNVDIWSGNHPFYTGSQK----M
RK31_PORPU MAKVDIHPIWYPDAKVYCD--GQLIMTIGSTKPE---LHVDIWSGNHPFFTGSQR----I
RL31_SYNY3 MPKADIHPTWYPDAKVTCN--GEVIMTVGSTKPE---INVEIWSGNHPFYTGTQK----I
RK31_CYACA MAKKNIHPQWYEEAKFYCN--GEIVKIIGSTRME---INADIWSGNHPFYIGTQK----I
RK31_TRICV MPKPEIHPTWFNETPIVCD--GKPLCYIGSTKSE---LQVDIWLANHPFYTDSQT----I
RL31_DEIRA -MQKDLHPKA-VPCKIIYQ--GQVVMETMSTRPE---IHVDVWSGVHPFWTGEER----F
RL31_MYCGE -MKKAIHFQS-QPVVFNCASCNSNFTIDSTAKQKD--LAIDICGKCHPFYIGQL-----T
RL31_MYCPN -MKKDFHFPS-QSVSFKCASCSNSFTIESTLKQKE--ITIDICGKCHPFYIGEL-----T
RL31_UREPA --MRDIHPVS-KPCVYNCVTCKKEFIIDSAAKNTE--VAIEVCSNCHTFFIGKQN----A
RL31_MYCPU -MQKDIHLKM-EPLKITCSTCFTSFDIVSSRK--T--IAIDICSKCHPFYTGDR-----T
RL31_RHILO -MKSAIHPDY-HTIKVVMTD-GTEYTTRSTWGKEGDTMNLDIDPTTHPAWTGGQQT---L
RL31_RHIME -MKADIHPDY-HTIKVVMTD-GTEYETRSTWGTEGATMNLEIDPKSHPAWTGGNQQ---L
RL31_CAUVC -MKQDIHPDY-HFITVTLTD-GSSYKTRSTYGKEGANLALDIDPRTHPAWTGGNAQ---L
RL31_RICPR -MKNGIHPEY-KKLLIKVG--SNIFETMSTHPIGE--ILMDVDFRKHPAWNKDSGN---V
:: . :: *. :
RL31_CAMJE VDAA-GRVEKFKKKYAMQ----------------------------
RL31_CLOAB VDVG-GRVEKFRKKYNLSADK-------------------------
RL31_MYCLE LDSG-GRVARFEKRYGKRKVGVDQVAAYPEQNNK------------
RL31_MYCTU LDSG-GRVARFEKRYGKRKVGADKAVSTGK----------------
RL31_STRCO LDTG-GRVARFEARFGKASAGSKK----------------------
RL31_AQUAE KPAYYEMLAEFEG--GKKEE--------------------------
RL31_ECOLI VATG-GRVDRFNKRFNIPGSK-------------------------
RL31_YERPE VASG-GRVDRFNKRFSVPGAKK------------------------
RL31_HAEDU VDTG-GRVERFNKRFNIPSTK-------------------------
RL31_HAEIN VDTG-GRVERFNSRFKIPSTK-------------------------
RL31_PASMU VDTG-GRVERFNKRFSIPSTK-------------------------
RL31_BUCAI IDTG-GRVERFKKRFKFTKQELN-----------------------
RL31_PSEAE LDTG-GRIDRFKQRFGVFGATK------------------------
RL31_VIBCH VDTG-GRVERFNKRFGALSAKK------------------------
RL31_NEIMA VDTT-GRVDKFNNKFGNLFKR-------------------------
RL31_TREPA VDSA-GRIDRFNRRYKIRG---------------------------
RL31_BACSU ASAD-GRVDRFNKKYGLK----------------------------
RL31_THEMA VDTE-GRVEKFRRKYGDNY---------------------------
RL31_HELPY ADTA-GRVEKFKQRYNLK----------------------------
RK31_GUITH LDTE-GRVERFMRKYGLKENNS------------------------
RK31_PORPU IDTE-GRVERFMRKYKMEKD--------------------------
RL31_SYNY3 IDTE-GRVDRFMRKYGMKEKTTGDKQDKKKK---------------
RK31_CYACA VDTE-GRIDKFIRKYNLNSENSESL---------------------
RK31_TRICV IDSE-GRVERFMKKYGINSTND------------------------
RL31_DEIRA LDTE-GRVDKFNKRFGDSYRRGSKK---------------------
RL31_MYCGE KQTVHGRAEKLSQKFNAGKAFLENKTKKSNQAKVEKQTRHRSINEL
RL31_MYCPN KQTVHGRAEKLSGKFNAGKAFLENKTPKKAKGKTEEYTKHRSLNEL
RL31_UREPA TTTLRGRAEKLNNRFEAGLNNINKKPEKKK--IQGKSEPRKSLNEL
RL31_MYCPU LAKATGQIDKFQKRLQKKQK--------------------------
RL31_RHILO LDRG-GRLSKFKKRFEGFGL--------------------------
RL31_RHIME VDRG-GRVSKFKKRFEGLGL--------------------------
RL31_CAUVC MDRG-GRVSRFNAKFAGFTGKKA-----------------------
RL31_RICPR VNQSNKSVSDFNKRFAGLSFDSKKEAS-------------------
: