CLUSTAL format seed alignment for MF_00514
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Features found in the protein:
- The following colors are used to highlight features:
- blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
- magenta is used to display DISULFID, THIOLEST and THIOETH.
- red is used for all other features, such as INIT_MET, ACTIVE SITE,
METAL,BINDING, NP_BIND, SITE, REGION, etc.
- The ID of the sequence used as the template for feature propagation is
underlined.
- A '<' at the beginning of a sequence or '>' at the end indicate that
the protein is fused with another domain either at the N- or C-terminus.
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RL35_SYNY3 --MPKLKTRKAAAKRFRPTGSGKKIIRRKAFKNHLLEHKSSEQKHRRLSNLALVHEADEK
RK35_CYAPA --MYKLKTRKAAAKRYKAVGN-KKISRRKAFRSHLLQKKSTN-RKRQLSQVVIASPGDTK
RK35_TRICV --MPKLKTRKAALKRYKKTAT-GKFLRRHAYKGHLLMKKSKT-QKRKLSQIICVSNNDSK
RK35_PORPU --MPKLKTSKAIAKRFKVSSS-GKILRHKASKSHLLQKKSSK-HRRHLSSTCQVDSRDAK
RL35_BACSU --MPKMKTHRGSAKRFKKTGS-GKLKRSHAYTSHLFANKSQK-QKRKLRKSAVVSAGDFK
RL35_LISMO --MPKMKTHRGSAKRFKRTGS-GKLKRRHGFTSHMFANKSQK-QKRKLRKSAMVSAGDFK
RL35_HALH5 --MPKMKTHKGAAKRFKKTGS-GKLKRSHAFTSHLFANKSQK-QKRKLRKSAIVHSGDFK
RL35_GEOSE --MPKMKTHRGSAKRFKKTAS-GKLKRGHAYTSHLFANKTKK-QKRHLRKATLVSPGDFK
RL35_STRPN --MPKQKTHRASAKRFKRTGS-GGLKRFRAYTSHRFHGKTKK-QRRHLRKASMVHSGDYK
RL35_STRP1 --MPKQKTHRASAKRFKRTGS-GGLKRFRAFTSHRFHGKTKK-QRRHLRKAGLVSSGDFK
RL35_LACLA --MPKQKTHRASAKRFKRTGN-GGLKRFRAYTSHRFHGKTVK-QRRQLRKSSMVSKGDFK
RL35_MYCFE --MPKMKTKSALKKRIKITGT-GKIMREQAYRSHLSQNKTTK-QKRQARKSVQMHSSDVK
RL35_MYCPU --MPKMKSKSALKKRIKITGT-GKIKRHQAFRSHLAQNKTTK-QKRQSRNAELMHKSDYK
RL35_MYCGE -----MKTKSAAVKRFKLTKS-GQIKRKHAYTSHLAPHKSTK-QKRHLRKQATVSNSELK
RL35_MYCPN -----MKVKSAAKKRFKLTKS-GQIKRKHAYTSHLAPHKTTK-QKRHLRKQGTVSASDFK
RL35_UREPA MAKIRQKTKRAVAKRFSITKN-GKLKRKHAYRSHLALGRSTK-AKRHLRKDAIMSTSDTK
RL35_THEMA --MPKVKTNRSAAKRFRITKN-GKIMRNHAYRSHKTGKKRRN-ALRALRKKDVVSSADKN
RL35_RHILO --MPKMKTKSAAKKRFKITGT-GKVLSAAAGKRHGMIKRSNK-FIRNARGTMVLAEPDGK
RL35_RICPR --MPKLKTKSAVKKRFKFTAT-GKVIASQAGKKHFMRRRTKA-QIRNLRGTTILCPQDGH
RL35_CAUVC --MPKLKTKSGAKKRFKLTAT-GKLKAGVAGKRHRLIGHNGK-YIRQNRGTKVMSEADA-
RL35_DEIRA --MPKMKTHKMAKRRIKITGT-GKVMAFKSGKRHQNTGKSGD-EIRGKGKGFVLAKAEW-
RL35_THET8 --MPKMKTHKGAKKRVKITAS-GKVVAMKTGKRHLNWQKSGK-EIRQKGRKFVLAKPEA-
RL35_MYCLE --MPKAKTHSGASKRFRRTGT-GKIVRQKANRRHLFEHKPST-RTRRLDGHTRVSANDTQ
RL35_MYCTU --MPKAKTHSGASKRFRRTGT-GKIVRQKANRRHLLEHKPST-RTRRLDGRTVVAANDTK
RL35_STRCO --MPKNKSHSGASKRFKITGS-GKVLRERAGKRHLLEHKSSR-VTRRLTGNAEMAPGDAA
RL35_CAMJE --MPKMKSVKSAVKRFKVG-K-NKIKRGSAFRSHILTKKPAK-RMRGLRTAKYVHSTNVK
RL35_HELPY --MPKMKTNRGASKRFKVK-K-NLIKRGSAFKSHILTKKSPK-RKANLNAPKHVHHTNAH
RL35_AQUAE MAKVKMKTNRSAAKRFKVTAK-GKIKRWKSGGAHYNTKKSSK-RKRHLRKHTYVKDNMLK
RL35_BORBU -MANKMKTRKSAKKRYSFTVN-GKVKYKKQNLRHILTKKSSK-RKRNLRKSGNLSCFEVK
RL35_TREPA --MAKMKTKSAAAKRFSVTGA-GKVKFKKMNLRHILTKKAPK-RKRKLRHAGFLSKVELK
RL35_CLOAB --MPKMKTKKAAAKRFKATGT-GKLKRGKAFRSHILTKKSTK-TKRNLRKGGYVSETQEK
RL35_BUCAI --MPKIKTLKSAAKRFKITAS-GKFKRKQANLRHILTKKTTT-KKRHLRPKILVSTGDMD
RL35_BUCAP --MPKIKTLRSAAKRFKKTAS-GKFKRKQANLRHILTKKTTT-KKRHLRPKILVSKGDIS
RL35_ECOLI --MPKIKTVRGAAKRFKKTGK-GGFKHKHANLRHILTKKATK-RKRHLRPKAMVSKGDLG
RL35_HAEIN --MPKIKTVRGAAKRFKKTAS-GGFKRKQSHLRHILTKKTTK-RKRHLRHKSMVAKADQV
RL35_XYLFA --MPKIKTNRAAAKRFRKTAS-GKYKAGHANRSHILTKKATK-RKRNLRQQNHVRAEDAG
RL35_PSEAE --MPKMKTKSGAAKRFKKTA--GGLKHKHAFKSHILTKMTTK-RKRQLRGTSMLNKSDVA
RL35_PSESM --MPKMKTKSGAAKRFLKTA--NGIKHKHAFKSHILTKMSTK-RKRQLRGSSLLHPSDVA
RL35_VIBCH --MPKMKNNKGAAKRFKKTA--GGIKYKHATKRHILTKRTTK-NKRQLRPNAILPKCELA
RL35_VIBME --MPKMKTNKGAAKRFKKTA--GGIKYKHATKRHILTKRTTK-NKRQLRPNSILPKCEVA
RL35_NEIMA --MPKMKTKSSAKKRFKVLGN-GGVKRAHAFKRHILTKKTTK-NKRQLRGTSMVNDRDLA
RL35_CHLPN --MPKMKTNKSVSARFKLTAS-GQLKRTRPGKRHKLSKKSSQ-EKRNLSKQPLVDKGQVG
RL35_CHLTR --MPKMKSNKSVAARFKLTGS-GQLKRTRPGKRHKLSKRSSQ-QKRNLSKQPLVDQGQVG
RK35_GUITH --MPKLKTRKSARKRFYISAK-GKFVRKRAFKSHILEKKTSK-RKRNLKRKMIVFKGENL
RK35_CYACA --MNIRKNSKSVSKRFKVTSN-KLILYKPASKSHLQEKKTVS-RKKRLCRVKRIKVVDSK
* * *
RL35_SYNY3 NVRLMLPYM--
RK35_CYAPA KIYLMLPYL--
RK35_TRICV PIKLMLPY---
RK35_PORPU NISINLPYL--
RL35_BACSU RIKQMLANIK-
RL35_LISMO RIRQMVAKMK-
RL35_HALH5 RIREMLTYKK-
RL35_GEOSE RIRQMLDNLK-
RL35_STRPN RIKAMLTRLK-
RL35_STRP1 RIKAMVTGL--
RL35_LACLA RIRRMVATMR-
RL35_MYCFE RFKALI-----
RL35_MYCPU RFKALIQK---
RL35_MYCGE RIGILI-----
RL35_MYCPN RIGNLI-----
RL35_UREPA RYTQCL-----
RL35_THEMA RVLRLLGKK--
RL35_RHILO KVIKNFLPNGL
RL35_RICPR NIKKYFLPYGI
RL35_CAUVC KIIRTYLPYGL
RL35_DEIRA ARMKLMLPRGK
RL35_THET8 ERIKLLLPYE-
RL35_MYCLE RVNSLLNG---
RL35_MYCTU RVTSLLNG---
RL35_STRCO KIKKLLGK---
RL35_CAMJE AVEKMLGI---
RL35_HELPY SVMSLLCRA--
RL35_AQUAE HVKALLKEF--
RL35_BORBU RIK-TLLPYG-
RL35_TREPA VVKRKLLPYA-
RL35_CLOAB TMK-TLLPYL-
RL35_BUCAI RVKSFLPYA--
RL35_BUCAP KVKSFLPYF--
RL35_ECOLI LVIACLPYA--
RL35_HAEIN LVVACLPYA--
RL35_XYLFA RLDRMLPYL--
RL35_PSEAE RVERSLRLR--
RL35_PSESM KVERMLRLR--
RL35_VIBCH AVARMLPYA--
RL35_VIBME GVMRMLPYA--
RL35_NEIMA SVAKMLPYA--
RL35_CHLPN MYKRMMLV---
RL35_CHLTR MYKRMMLV---
RK35_GUITH ALKTMLPYLR-
RK35_CYACA SIKLRYMF---