CLUSTAL format seed alignment for MF_00576
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Features found in the protein:- The following colors are used to highlight features:
- blue indicates DNA_BIND, DOMAIN, PROPEP, REPEAT, SIGNAL, TRANSMEM
and ZN_FING.
- green indicates INTRAMEM, MOTIF, PEPTIDE, TOPOD_DOM and TRANSIT.
- magenta is used to display DISULFID
- red indicates ACT_SITE, BINDING, CARBOHYD, CROSS_LNK, LIPID,
MOD_RES, NON_STD and SITE.
- The ID of the sequence used as the template for feature propagation is
underlined.
- An 'X' at the beginning or at the end of a sequence indicates that
the protein is fused with another domain respectively at its N- or
C-terminus.
Sequences that are concerned have a '_P' (for partial) suffix added
to their ID.
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GVPA1_PRIMG -MSIQKSTD----SSSLAEVIDRILDKGIVIDAFARVSLVGIEILTIEARVVIASVDTWL
GVPA2_PRIMG -MSIQKSTN----SSSLAEVIDRILDKGIVIDAFARVSVVGIEILTIEARVVIASVDTWL
GVPA_NOSS1 -MAVEKTNS----SSSLAEVIDRILDKGIVVDAWVRVSLVGIELLAIEARIVIASVETYL
GVPA_MICDP -MAVEKTNS----SSSLAEVIDRILDKGIVVDAWVRVSLVGIELLAIEARIVIASVETYL
GVPA_DOLFA -MAVEKTNS----SSSLAEVIDRILDKGIVIDAWVRVSLVGIELLAIEARIVIASVETYL
GVPA_PLARU -MAVEKVNS----SSSLAEVIDRILDKGIVIDAWVRVSLVGIELLSIEARIVIASVETYL
GVPA_PSEGP -MAVEKVNS----SSSLAEVIDRILDKGIVIDAWVRVSLVGIELLSIEARVVIASVETYL
GVPA_ANCAQ -MAVEKINA----SSSLAEVVDRILDKGVVVDAWVRVSLVGIELLAVEARVVVAGVDTYL
GVPA_HALMT ----MVQPD----SSSLAEVLDRVLDKGVVVDVWARISLVGIEILTVEARVVAASVDTFL
GVPA_HALVU ----MAQPD----SSSLAEVLDRVLDKGVVVDVYARLSLVGIEILTVEARVVAASVDTFL
GVPA1_HALSA ----MAQPD----SSGLAEVLDRVLDKGVVVDVWARVSLVGIEILTVEARVVAASVDTFL
GVPA2_HALSA ----MAQPD----SSSLAEVLDRVLDKGVVVDVWARISLVGIEILTVEARVVAASVDTFL
GVPA1_STRCO MTVVPAQQTGGGGSSGLYDVLELVLDRGLVIDAFVRVSLVGIEILKIDVRVVVASVDTYL
GVPA2_STRCO MITYDDEVVCAPRAGTLYDVLELILDRGMVIDVFVRVSLVGIEILKVDARIVVASVDTYL
:. * :*:: :**:*:*:*.:.*:*:****:* ::.*:* *.*:*:*
GVPA1_PRIMG RYAEAVGLLTDKVEE-------------------EGLPGRTE--ERGAGLSF--------
GVPA2_PRIMG RYAEAVGLLRDDVEE-------------------NGLPERSNSSEGQPRFSI--------
GVPA_NOSS1 KYAEAVGLTQSAAMP-------------------A-------------------------
GVPA_MICDP KYAEAVGLTQSAAVP-------------------A-------------------------
GVPA_DOLFA KYAEAVGLTQSAAVP-------------------A-------------------------
GVPA_PLARU KYAEAVGLTAQAAVP-------------------SV------------------------
GVPA_PSEGP KYAEAVGLTASAAVP-------------------AA------------------------
GVPA_ANCAQ KYAEAVGLTASAQAA---------------------------------------------
GVPA_HALMT HYAEEIAKIEQAELT-------------------AGAEAA-PTPEA--------------
GVPA_HALVU HYAEEIAKIEQAELT-------------------AGAEAA-PTPEA--------------
GVPA1_HALSA HYAEEIAKIEQAELT-------------------AGAEAA-PEA----------------
GVPA2_HALSA HYAEEIAKIEQAELT-------------------AGAEAPEPAPEA--------------
GVPA1_STRCO RFAEACNRLDLEAGPRKDPGLPDLVGEMTE----SGARGKSKGALSGAAETISDAFKQAR
GVPA2_STRCO RFAEACNRLDLEHDVRSKTVPEMFGSPMAKTVGRAGARRTARSLTDKVRDVLTPEHEHEE
::**
GVPA1_PRIMG --------------------------------------------------
GVPA2_PRIMG --------------------------------------------------
GVPA_NOSS1 --------------------------------------------------
GVPA_MICDP --------------------------------------------------
GVPA_DOLFA --------------------------------------------------
GVPA_PLARU --------------------------------------------------
GVPA_PSEGP --------------------------------------------------
GVPA_ANCAQ --------------------------------------------------
GVPA_HALMT --------------------------------------------------
GVPA_HALVU --------------------------------------------------
GVPA1_HALSA --------------------------------------------------
GVPA2_HALSA --------------------------------------------------
GVPA1_STRCO D---------DGGSERETSSRPRARKAAPSRRKEEQE-------------
GVPA2_STRCO EPEEAEDRPRAGAERGRSTQRPRSRPAARPRDEDDRPRSRPRRRTEEEDR