CLUSTAL format seed alignment for MF_00630
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Features found in the protein:
- The following colors are used to highlight features:
- blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
- magenta is used to display DISULFID, THIOLEST and THIOETH.
- red is used for all other features, such as INIT_MET, ACTIVE SITE,
METAL,BINDING, NP_BIND, SITE, REGION, etc.
- The ID of the sequence used as the template for feature propagation is
underlined.
- A '<' at the beginning of a sequence or '>' at the end indicate that
the protein is fused with another domain either at the N- or C-terminus.
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Y004_MYCPA ---------MSDD--QSPSPSGE---------PTAMDLVRRTLEEARAAARAQGKDAGRG
Y004_MYCTU -------MTGSVD--RPDQNRGER-----SMKSPGLDLVRRTLDEARAAARARGQDAGRG
Y004_MYCLE -------MIESNESYSYGGDTIEP-----LGTLSGFDLVRRALEEARAAACAQGKDAGRG
Y004_MYCSM -------MTGPFDDDGPEEDAPVPAPPDHLAGLRGIDLVRRTLEEARGAARSQGKDVGRG
Y005_COREF MTEDEDFIAQAFERVRREAQRRNGR----VPDLNNRDAFRRTTPRPIGDR-ANGGNGGGG
Y005_CORGL MT---DPIEQAFERIRAEAMRRNGS----VPDLNKNDAFRRP-PAP--------K----G
Y3875_STRCO -------MSADAPEPGPGQSPGERAS--GGPEPSGVDLARVALRAA--------REAARA
Y636_BIFLO -------MNPPIARQLNLDETKLP-----------AEIFERLSRRG-------------A
: . .
Y004_MYCPA RAAAPTPRRVAGQRRSWSGPGPDARDPQPLGRLARDLARKRGWSAQVAEGTVLGNWTAVV
Y004_MYCTU RVASVASGRVAGRRRSWSGPGPDIRDPQPLGKAARELAKKRGWSVRVAEGMVLGQWSAVV
Y004_MYCLE HVVPPVPFRVTDRRRNWSGPGPDVRDPQPLGKVAHDLAKKRGWSAQVAEGRVFGQWASMV
Y004_MYCSM RSGPARRVGGNRRRRTWSGPGPDARDPQLLGAVTQDLAKSRGWSARVAEGSVIGRWRAVV
Y005_COREF GVDKRRRGRPTGPDGRYK---PYVRSAEPLGAILNREIRSRGWSRDIAAGWVTSHWAELV
Y005_CORGL GVEKRKKGRASGLDGRQK---RYVRGAESLGSVLNKEIQRRGWGKDIAGGWVTSNWEELV
Y3875_STRCO RGDAAQQKKQARRGGLRSGARADGRDPMALGSAINRLITERGWETPAAVGGVMGRWPEIV
Y636_BIFLO TLKDYRRRREEAIENFGK----PGRDPAELGSVMTTIAGNGVWAANMKLAQLRNHWDQVV
. *.. ** * . : ..* :*
Y004_MYCPA GHQIADHAVPTGLRD--GVLSVSAESTAWATQLRMMQAQLLAKIAAAVGNGVVTSLKITG
Y004_MYCTU GHQIAEHARPTALND--GVLSVIAESTAWATQLRIMQAQLLAKIAAAVGNDVVRSLKITG
Y004_MYCLE GGQIADHAFPVGLNN--GVLSVTAESTAWATQLRIMQAQLLAKIAAAVGNGVVTSLKITG
Y004_MYCSM GDQIADHATPTALNE--GVLTVTAESTASATQLRMVQSQLLAKIAAVVGDGVVTTLKIVG
Y005_COREF GPKIAQHTKVEMIKD--KKLFITCDSTAWATNLRMMQKQILQVIAEKVGPDVIAELRIFG
Y005_CORGL GAKIAQHTRVEMIKD--KKLFITCDSTAWATNLRMMQRQILQVIAEKVGPNIITELRIFG
Y3875_STRCO GADVAKHCVPERYDEDERVLVVRCDSTAWATNLRLLAPTLVARLNEDLGHGSVRMIKVLG
Y636_BIFLO GQAIASHSAVADFTD--GVLTIRAESTVWATQLTYLIPQLTDTIRRNLKGLTITEIRVTG
* :*.* : * : .:**. **:* : : : : : ::: *
Y004_MYCPA PAAPS---WRKGPRHIAG-RGPRDTYG
Y004_MYCTU PAAPS---WRKGPRHIAG-RGPRDTYG
Y004_MYCLE PTAPS---WRKGPWHIAG-RGPRDTYG
Y004_MYCSM PAGPS---WRKGRYHVSG-RGPRDTYG
Y005_COREF PQAPS---WRKGPLHVKG-RGPRDTYG
Y005_CORGL PQAPS---WRKGPLHVKG-RGPRDTYG
Y3875_STRCO PGGPGGPGRRYGPLRAPGSQGPGDTYG
Y636_BIFLO PAAGYTRKWARRR--------------
* .