CLUSTAL format seed alignment for MF_00794
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Features found in the protein:
- The following colors are used to highlight features:
- blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
- magenta is used to display DISULFID, THIOLEST and THIOETH.
- red is used for all other features, such as INIT_MET, ACTIVE SITE,
METAL,BINDING, NP_BIND, SITE, REGION, etc.
- The ID of the sequence used as the template for feature propagation is
underlined.
- A '<' at the beginning of a sequence or '>' at the end indicate that
the protein is fused with another domain either at the N- or C-terminus.
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VAPB2_PYRAB --MSKTITIADDVYYELVKMKG-NK-SFSELLRELIG---KKKKGNLDILMIAFGTMS--
Y106A_PYRHO --MSKTITIADDVYYELVKMKG-KR-SFSEVLRELIG---KKKEGNLDVLMIAFGTMD--
Y1752_THEKO --MGKTITIADDVYYELVKMKG-KK-SFSELLRELIG---KKKKGNLDVLMIAFGTRT--
VPB18_ARCFU --MTKTISISDDVYEMLVKIKG-KR-SFSEVIRELV-----KKEGNFDLLMVAFGTRS--
VAPB3_METJA MINMATITIDDDVYKELLKLKG-RK-SVSEFIKELLE---ERKRKNLDVFMIAFGSRS--
VAPB4_PYRFU --MVKTITVSDDVYNELLRIKG-KK-SFSELLRELLR----EKKGNSVALKHIYGILN--
Y1222_PYRFU --MVKTITISDDVYNELLRIKG-NK-SFSEVLRELLK----ERKGNKEVLKRIFGILS--
Y468_SULAC --MPKVITISDDVYDKLSKLKK-GR-SFSETINELIEFYNKNRKGNKDVLLQMFGILN--
VPB12_SULTO ---MKTIMIRDDVYKKLLEIKG-DK-SFSEIIEELIE---ESLSVRRKKIEKYFGILN--
Y1481_ARCFU ---MKTISIRDDVYRKLLEMKD-EEDSFSDVIEKLLK----RKKTD---IRRYFGVLK--
VPB16_ARCFU ---MKNIMVRDEVYEKLQKMKK-GRESFSDVILRLIE---GRKKRGIEILERYAGSLS--
VAPB3_METAC -MPTRTISISEEAYEKLKSLKSSEKDSFSDVILRYYP-----KKRKLSEVLAEIGPNPEL
Y2475_METMA -MPTRTISISEEAYERLKSLKTSEKDSFSDVILKYYP-----RKRKLSEVLAEIGSNPEL
VPB15_ARCFU -MPTKTITITLEAYERLKREKR-EGESFSDVIIRLTE-----KRRDLLEFAGKWKDS---
Y365_SULIA --MAKTITISEEAYKLLLKEKR-DGESFSDVIVRLIKG----NRREVMDYAGIWSDMN--
VPB21_SULTO --MAKTITISEEAYRLLLSEKR-EGESFSDVIIRLVKS----SRKNIMDYAGIWGDMN--
* : :.* * * *.*: : .
VAPB2_PYRAB EEEVKEFKKKIKEVE----EWINSWTPVS-
Y106A_PYRHO EEEAKELEEKIKEVG----KWLNSWTPV--
Y1752_THEKO PEEVEELKKELKEVE----EWMDSWTPASL
VPB18_ARCFU EEEVEKLKREMKEVE----EWMQSLCNH--
VAPB3_METJA EEDVEKLKKELKEAE----KWMQSLIQV--
VAPB4_PYRFU GEEYRETRKRLKELEKEFEKWKQFLTQV--
Y1222_PYRFU EEEYQEVKKRLKELEGEFEKWEQSLTQM--
Y468_SULAC EEEATEMASETLNIRKSFRFRAVENGDT--
VPB12_SULTO EEEARGLAKEIEEMRKRTDEDIARKLSNY-
Y1481_ARCFU DSEVLDEIEKSLNAR------KSARFRV--
VPB16_ARCFU DSELEKIVME--ERR----KFRVRSFDS--
VAPB3_METAC ADAIEKVSGEMRAEK---MREIDPES----
Y2475_METMA ADAIEKASRDMRKAK---MRNVDLDAGA--
VPB15_ARCFU GEEIEKIILEGRKEF---DKHVLS------
Y365_SULIA DEESNKLFKDLEKMW---ERWNVNA-----
VPB21_SULTO DEEVNKLFEDLKKMW---ERWNVNA-----
.