CLUSTAL format seed alignment for MF_01042
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Features found in the protein:
- The following colors are used to highlight features:
- blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
- magenta is used to display DISULFID, THIOLEST and THIOETH.
- red is used for all other features, such as INIT_MET, ACTIVE SITE,
METAL,BINDING, NP_BIND, SITE, REGION, etc.
- The ID of the sequence used as the template for feature propagation is
underlined.
- A '<' at the beginning of a sequence or '>' at the end indicate that
the protein is fused with another domain either at the N- or C-terminus.
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Y1979_VIBVU -MSNKDNDLDDDFSLFREAVQGIKKLPQDTIVQQPNRN-TKQKE-IKRISREASDSEFYF
Y2436_VIBVY -MSNKDNDLDDDFSLFREAVQGIKKLPQDTIVQQPNRN-TKQKE-IKRISREASDSEFYF
Y2204_VIBPA -MSKKDTEHDDDFALFKEAVQGVKKLRQDTIIQQPKKN-TKQKE-IKRSNREASDSEFYF
YFCN_ECOLI -MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVP-VKRLIQEQADASHYF
YFCN_ECO57 -MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKVSEVP-VKRLIQEQVDASHYF
YFCN_SALTY -MKKKTSLSEEDQALFRQLMVGTRKIKQDTIVHRPLRKKITEVP-TRRLIQEQADASHYF
Y2749_YERPE -MKKKYHLTPDELQLFKESIAGAKKLRQDTIVHHTPPKLGKKIA-PERLLQEQVDASYYF
Y3198_PHOLL MMKNKYSLNEEEIHLFQQSVAGTKRINQDTVLHSPRRKKTSYIA-PERIQQEQIDASYYF
Y1202_HAEIN ---MQDE-----FDLFRTETKGIKPIKQDTFVAPRQKR-DQKKI-ELKELRAKEDTLFYF
Y391_PASMU -MLEPDD-----IALFRGAVKGVKALKQDKFIAPRQKM-SKKKS-TLRDIREKEDTLFYF
Y1679_HAEDU -MIEHDD-----LALFRTAIKGTKKIKQDTFVPKTMPR--KKVS-EWRETQQQKDTEFFF
Y3081_SHEON -MNKDDDK--EGMAMFSALIEGIKPITQDKRHFRTPLK-TKQEI-ELKEQ--QLHANSYF
Y098_BUCAI -MDKNSRYTVDSSILFRQWLNDTREMVQDTIFHSRIQKKNNNHPVSQRVFFEQNAHSHYF
Y091_BUCAP -MNKNRQLAVNSNILFRKWLNGTREMVQDTIFHSRLHKVNQKIR-SKRMFFEQDVHSNYF
Y092_BUCBP -MNKSDSLLSKDLFLLYQEFSEIRKIKQDTVFQSRRFKLVQDIK-IKKNMYEQDIHYHYL
:: : : **. : ::
Y1979_VIBVU SDEFVPLLNE-EGPTRYARDDVSTYEVKRLRRGVYVPDVFLDMHGMTQQEAKRELGAMIA
Y2436_VIBVY SDEFVPLLSE-EGPTRYARDDVSTYEVKRLRRGVYVPDVFLDMHGMTQQEAKRELGAMIA
Y2204_VIBPA SDEFVPRLNE-EGPTRYARDDVSTYEVKRLRRGVYVPDVFLDMHGMTQQEAKRELGAMIA
YFCN_ECOLI SDEFQPLLNT-EGPVKYVRPDVSHFEAKKLRRGDYSPELFLDLHGLTQLQAKQELGALIA
YFCN_ECO57 SDEFQPLLNA-DGPVKYVRPGVDHFEAKKLRRGDYSPELFLDLHGLTQLQAKQELGALIA
YFCN_SALTY SDEFQPLLNT-EGPVKYVREDVSHFELKKMRRGDYSPELFLDLHGLTQLQAKQELGALIA
Y2749_YERPE SDEFQPLLDT-DGPTRYVRPGVDNFEVKKLRRGDYSPEMFLDLHGLTQKQAKQELGALIA
Y3198_PHOLL SDEFQPNLDS-EGPTRYVRGDTNHYELKKLRRGDYSPELFLDLHGLTQMQAKQEIGALIA
Y1202_HAEIN SDEYEPLLNDNDGVVKYLRDGEDSHLLKQLRRGDFSPELFLDLHGLTREQAKQELAALLL
Y391_PASMU SDEYEPLLNE-ESAVRYLREGEDSHILKQLRRGDFSPELFLDLHGLTKEQAKIELASLLQ
Y1679_HAEDU SDEYEPLLKEENEKVKYLRADIDPYILKQLGRGDFQPDLFLDLHGLTRQKAKTELAALIL
Y3081_SHEON SDTYQPLLPV-QGPMRWLDEGVDSLELKRLRRGDYQPDLLLDLHGYRQSEAKLELAALIQ
Y098_BUCAI SYRNNKNLFK-ENPVSYIRHQSLYNVLKNLKKGRYNPDISIDLHGLTQHQAQQALGELIT
Y091_BUCAP SFYKKKDFFK-ENPVSYVRNKDFTNVLKKLKKGKYYPDIFLDLHGLNQYQARKKLGQLIA
Y092_BUCBP SCQKFQISFN-HDSIFYLRNKNYFDVLKKLKIGKYVPEIILDVHGLNQDQAKRKLGELLN
* . : *.: * : *:: :*:** : :*: :. ::
Y1979_VIBVU YCVKNEVHCACVQHGIGKHILKQKTPRWLAQHPDVLAFHQAPLEFGGDGALLVLLSIPEK
Y2436_VIBVY YCVKNEVHCACVQHGIGKHILKQKTPLWLAQHPDVLAFHQAPLEFGGDGALLVLLSIPEK
Y2204_VIBPA YCVKNEIHCACVQHGIGKHILKQKAPLWLAQHPDVMAFHQAPLEFGGDGALLVLLSIPEK
YFCN_ECOLI ACRREHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPKEYGGDAALLVLIEVEEW
YFCN_ECO57 ACRREHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPKEYGGDAALLVLIEVEEW
YFCN_SALTY ACRREHIFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPKEYGGDAALLVLIEVEEW
Y2749_YERPE ACKREHVHCACVMHGHGKHVLKQQTPLWMAQHPDVLAFHQAPKEWGGTAALLLLIELEE-
Y3198_PHOLL ACRREHVYCACIMHGHGKHILKQQTPLWLAQHPDIIAFHQAPKEWGGNAALLILIELDEP
Y1202_HAEIN ACENEHVDCASIMTGYGTFTLKKQIPRWLVQHPKVRALHQAPREWGGEAAILILVDL---
Y391_PASMU ACENEHVYCASVMTGYGSYILKRQIPRWLVQHPKVRALHQAPKAWGGDAAILILFEV---
Y1679_HAEDU ACEREQVYCASIMTGYGTRTLKEQIPRWLVQHPKVIALHQAPKQWGGDAAILVLIEQPES
Y3081_SHEON ACVKQQSQCCCVMHGYGTGILKQQVPMWLVQHPMVKAFHQAPKEWGGDAALLVLIDIGDQ
Y098_BUCAI TCQKEKIFCAHIMHGHGKHILKKQTPFWLSQHPDIIAFHEAPKFFGSDAAIIVIIEINSL
Y091_BUCAP ICQKEKMFCAHIMHGYGKNILKKQIPFWLSQHPDIVAFHQAPKMFGNDAAIMVIIEIHS-
Y092_BUCBP ICHKENLFCASVIHGHGRNILKNKIPIWLSRHPSVIAFYKIPKKFGRSTAILFLIHSSD-
* .:. *. : * * **.: * *: :** : *::: * :* *::.:.
Y1979_VIBVU --------
Y2436_VIBVY --------
Y2204_VIBPA --------
YFCN_ECOLI LPPELP--
YFCN_ECO57 LPPELP--
YFCN_SALTY QPPELP--
Y2749_YERPE --------
Y3198_PHOLL --------
Y1202_HAEIN --------
Y391_PASMU --------
Y1679_HAEDU LEKRLF--
Y3081_SHEON PHRR----
Y098_BUCAI KKNINIFN
Y091_BUCAP --------
Y092_BUCBP --------