CLUSTAL format seed alignment for MF_01088
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Features found in the protein:
- The following colors are used to highlight features:
- blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
- magenta is used to display DISULFID, THIOLEST and THIOETH.
- red is used for all other features, such as INIT_MET, ACTIVE SITE,
METAL,BINDING, NP_BIND, SITE, REGION, etc.
- The ID of the sequence used as the template for feature propagation is
underlined.
- A '<' at the beginning of a sequence or '>' at the end indicate that
the protein is fused with another domain either at the N- or C-terminus.
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USPB_ECOLI MISTVALFWALCVVCIVNMARYFSSLRALLVVLRNCDPLLYQYVDGGGFFTSHGQPNKQV
USPB_SALTY MISTVSLFWALCVVCIVNMARYFSSLRALLVVLRGCDPLLYQYVDGGGFFTTHGQPNKQV
USPB_YERPE MISTVALFWALCVVCVVNMARYYSSLRALLVVLRGCDPLLYQYVDGGGFFTSHGQPSKQI
USPB_PHOLL MFSTIALFWALCLVCIINMMRYFSSLRALLSILRQSDPLLYQSVDGNGFFTTHGQLNKQI
USPB_VIBPA MISGDTILFALMVVTGVNMIRYLTALRSLIYIMREAHPLLYQQVDGNGFFTTHGNVTKQV
USPB_VIBVU MINGDIILFALMVVTGVNLARYLTALRSLIYIMREAHPLLYQQVDGNGFFTTHGNVTKQV
USPB_VIBCH MISGDTILFALMLVTAINVARYVTALRSLIYIMREAHPLLYQQVDGRGFFTTHGNVTKQV
*:. :::** :* :*: ** ::**:*: ::* ..***** *** ****:**: .**:
USPB_ECOLI RLVWYIYAQRYRDHHDDEFIRRCERVRRQFILTSALCGLVVVSLIALMIWH
USPB_SALTY RLVWYIYAQRYRDHHDEEFIRRCERVRRQFLLTSALCGLVVVSLIALMIWH
USPB_YERPE RLVGYIFAQRYLDHHDPEFIRRCERLRGQFILTSALCGLVVVSLVALMLWY
USPB_PHOLL RLVNYINSQRYLDHHDPEVVLRCERLRKQFILTSSLSGLVVICLISMLIWY
USPB_VIBPA RLFHYIKSKEYHHHHDEIFTGKCERVRELFVLSTALLGVTLLAAFIL----
USPB_VIBVU RLYHYLKSKEYHHHHDEVFTGKCDRVRELFVLSVSLTGVTLLAAFLL----
USPB_VIBCH RLYHYLKSREYHHHHDPVFTGKCDRVRELFILSGSLLVLTTVVAFML----
** *: ::.* .*** . :*:*:* *:*: :* :. : . :