CLUSTAL format seed alignment for MF_01203
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Features found in the protein:
- The following colors are used to highlight features:
- blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
- magenta is used to display DISULFID, THIOLEST and THIOETH.
- red is used for all other features, such as INIT_MET, ACTIVE SITE,
METAL,BINDING, NP_BIND, SITE, REGION, etc.
- The ID of the sequence used as the template for feature propagation is
underlined.
- A '<' at the beginning of a sequence or '>' at the end indicate that
the protein is fused with another domain either at the N- or C-terminus.
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CLCB_ECOLI MFHRLLIATVVGILAAFAVAGFRHAMLLLEWLFLNNDSGSLVNAATNLSPWRRLLTPALG
CLCB_SHIFL MFRRLLIATVVGILAVFAVAGFRHAMLLLEWLFLNNDSGSLVNAATNLSSWRRLLTPALG
CLCB_ECO57 MFRRLLIATVVGILAAFAVAGFRHAMLLLEWLFLNNDSGSLVNAATNLSPWRRLLTPALG
CLCB_ECOL6 MFRRLLIATIVGILAAFAVAGFRHAMLLLEWLFLNNDSGSLVNAATNLSPWRRLLTPALG
CLCB_SALTI MFRRLLIATLIGILAALAVAAFRHAMQLLEWIFLSNDTGSLVNAAEGLSPWRRLITPALG
CLCB_SALTY MFRRLLIATLIGILAALAVAAFRHAMQLLEWIFLSNDTGSLVNAAEGLSPWRRLITPALG
CLCB_YERPE MLRRLVISIMLGMVSALIVWLFHQAMLGLEWLLFSRTDGSLVAAAASITGWRRALTPALG
CLCB_YERPS MLRRLVISIMLGMVSALIVWLFHQAMLGLEWLLFSRTDGSLVAAAASITGWRRALTPALG
CLCL_RALN1 ---MLAIAGLIGCAGALATIAFRECLRQLQWWLAGADQG-LVATARALPWWARLLVPTAG
* *: ::* ..: . *:..: *:* : . * ** :* :. * * :.*: *
CLCB_ECOLI GLAAGLLLMGWQKFTQQRPHAPTDYMEALQT-DGQFDYAASLVKSLASLLVVTSGSAIGR
CLCB_SHIFL GLAAGLLLMGWQKFTQQRPHAPTDYMEALQT-DGQFDYAASLVKSLASLLVVTSGSAIGR
CLCB_ECO57 GLAAGLLLMGWQKFTQQRPHAPTDYMEALQT-DGQFDYAASLVKSLASLLVVTSGSAIGR
CLCB_ECOL6 GLAAGLLLMGWQKFTQQRPHAPTDYMEALQT-DGQFDYAASLVKSLASLLVVTSGSAIGR
CLCB_SALTI GLAAGLLLWGWQKMNQQRPHAPTDYMEALQT-DGQFDVGASLVKSLASLLVVVSGSAIGR
CLCB_SALTY GLAAGLLLWGWQKMNQQRPHAPTDYMEALQT-DGQFDVGASLVKSLASLLVVVSGSAIGR
CLCB_YERPE GLAAGLLLWAYQRYQHRKPSAPTDYMEAIEIGDGRLDVSASLVKSLASLLVVSSGSAIGR
CLCB_YERPS GLAAGLLLWAYQRYQHRKPSAPTDYMEAIEIGDGRLDVSASLVKSLASLLVVSSGSAIGR
CLCL_RALN1 GLLAGLTLQYGLKWIPRK--GAEDYMEAIAVGDGVLSARQSLVRSASSLCSVASGASIGR
** *** * : :: .. *****: ** :. ***:* :** * **::***
CLCB_ECOLI EGAMILLAALAASCFAQRFTPR-----QEWKLWIACGAAAGMAAAYRAPLAGSLFIAEVL
CLCB_SHIFL EGAMILLAALAASCFAQRFTPR-----QEWKLWIACGAAAGMAAAYRAPLAGSLFIAEVL
CLCB_ECO57 EGAMILLAALAASCFAQRFTPR-----QEWKLWIACGAAAGMAAAYRAPLAGSLFIAEVL
CLCB_ECOL6 EGAMILLAALAASCFAQRFTPR-----QEWKLWIACGAAAGMAAAYRAPLAGSLFIAEVL
CLCB_SALTI EGAMILLAALAASSFARRFTPR-----EEWKLWIASGAAAGMAGAYHAPLAGSLFIAEIL
CLCB_SALTY EGAMILLAALAASSFARRFTPR-----EEWKLWIASGAAAGMAGAYHAPLAGSLFIAEIL
CLCB_YERPE EGAMVLLAALFASVFAQRYAKP-----KEWKLWVACGAAAGMASAYHAPLAGSLFIAEIL
CLCB_YERPS EGAMVLLAALFASVFAQRYAKP-----KEWKLWVACGAAAGMASAYHAPLAGSLFIAEIL
CLCL_RALN1 EGPMVQLAAMCGSLLGRVLRHAMPVSVEHMRLLVACGAAAGITSAYNAPIAGAVFVCEIV
**.*: ***: .* :.: :. :* :*.*****::.**.**:**::*:.*::
CLCB_ECOLI FGTMMLASLGPVIISAVVALLVSNLINHSDALLYNVQLSVTVQARDYALIISTGVLAGLC
CLCB_SHIFL FGTMMLASLGPVIISAIVAWLVSNLINHSDALLYNVQLSVTVQARDYALIISTGVLAGLC
CLCB_ECO57 FGTMMLASLGPVIISAVVALLVSNLINHSDALLYSVQLSVTVQARDYALIISTGVLAGLC
CLCB_ECOL6 FGTMMLASLGPVIISAVVALLISNLINHSDALLYSVQLSVTVQARDYALIISTGVLAGLC
CLCB_SALTI FGTLMLASLGPVVVSAVVALLTTHVLNGSDSLLYTVHLTVDLYAREYVMIVSTGLVAGLW
CLCB_SALTY FGTLMLASLGPVVVSAVVALLTTHVLNGSDSLLYTVHLTVDLHAREYVMIVSTGLVAGLC
CLCB_YERPE FGTLMLASLGPVVIAAVSALLTINLLQGGQETLYQVQTLPSPWPVQYFLMALLGLMAGFS
CLCB_YERPS FGTLMLASLGPVVIAAVSALLTTNLLQGGQETLYQVQTLPSPWPVQYFLMALLGLMAGFS
CLCL_RALN1 FGAITTATLGPLLVSAVTADIIVRQFFG-YGAVYAMPHFDFVSGWEVLTYLGLGLAAGMA
**:: *:***::::*: * : . : :* : : *: **:
CLCB_ECOLI GPLLLTLMNACHRGFVSLKLAPPWQLALGGLIVGLLSLFTPAVWGNGYSTVQSFLTAPPL
CLCB_SHIFL GPLLLTLMNACHRGFVSLKLAPPWQLALGGLIVGLLSLFTPAVWGNGYSTVQSFLTAPPL
CLCB_ECO57 GPLLLTLMNACHRGFVSLKLAPPWQLALGGLIVGLLSLFTPAVWGNGYSTVQSFLTAPPL
CLCB_ECOL6 GPLLLTLMNACHRGFVSLKLAPPWQLALGGLIVGLLSLFTPAVWGNGYSTVQSFLTAPPL
CLCB_SALTI GPLLMWLMTASHNSFLRLKLSPPWQLALGGLIVGLLSLLTPTVWGNGYSVVQSFLLSPPL
CLCB_SALTY GPLLMWLMTASHNSFLRLKLSPPWQLALGGLIVGLLSLLTPTVWGNGYSVVQSFLLSPPL
CLCB_YERPE GPLFLKAMAASSHAFRSLNLLPPLQLALGGIIVGLLSLIFPEVWGNGYSVVQSLLTTPPG
CLCB_YERPS GPLFLKAMAASSHAFRSLNLLPPLQLALGGIIVGLLSLIFPEVWGNGYSVVQSLLTTPPG
CLCL_RALN1 GPLLLGLIDRARGAFARTRLPQALRLALGGLIVGALSIRVPEVWGNGYSVVNGFLHAPWL
***:: : . .* .* . :*****:*** **: * *******.*:.:* :*
CLCB_ECOLI LMIIAGIFLCKLCAVLASSGSGAPGGVFTPTLFIGLAIGMLYGRSLGLWFPDGEEITLLL
CLCB_SHIFL LMIIAGIFLCKLCAVLASSGSGAPGGVFTPTLFIGLAIGMLYGRSLGLWFPDGEEITLLL
CLCB_ECO57 LMIIAGIFLCKLCAVLASSGSGAPGGVFTPTLFIGLAIGMLYGRSLGLWFPDGEEITLLL
CLCB_ECOL6 LMIIAGIFLCKLCAVLASSGSGAPGGVFTPTLFIGLAIGMLYGRSLGLWLPDGEEITLLL
CLCB_SALTI FSLIGGIFACKILAVLASSGSGAPGGVFTPTLFVGLSIGMFLGRIWGFWLPGSDEIAILL
CLCB_SALTY FSLIGGIFVCKILAVLASSGSGAPGGVFTPTLFVGLSIGMFLGRIWGFWLPGSDEIAILL
CLCB_YERPE VLLIGGILICKLLAVLASSGSGAPGGVFTPTLFVGAALGMLCGQIFSLWPVLGDNIGLLM
CLCB_YERPS VLLIGGILICKLLAVLASSGSGAPGGVFTPTLFVGAALGMLCGQIFSLWPVLGDNIGLLM
CLCL_RALN1 WQTVALVLVCKVGATAASAGSGAVGGVFTPTLFCGAALGLLYGTGMHALLPGAAPVPVSY
:. :: **: *. **:**** ********* * ::*:: * . : :
CLCB_ECOLI GLTGMATLLAATTHAPIMSTLMICEMTGEYQLLPGLLIACVIASVISRTLHRDSIYRQHT
CLCB_SHIFL GLTGMATLLAATTHAPIMSTLMICEMTGEYQLLPGLLIACVIASVISRTLHRDSIYRQHT
CLCB_ECO57 GLTGMATLLAATTHAPIMSTLMICEMTGEYQLLPGLLIACVIASVISRTLHRDSIYRQHT
CLCB_ECOL6 GLTGMATLLAATTHAPIMSTLMICEMTGEYQLLPGLLIACVIASVISRTLHRDSIYRQHT
CLCB_SALTI GLAGMATLLAATTHAPIMSTLMICEMTGEYQLLPGLLIACVVASVLSRTLRHDSIYRQHA
CLCB_SALTY GLAGMATLLAATTHAPIMSTLMICEMTGEYQLLPGLLIACVVASVLSRTLRHDSIYRQHA
CLCB_YERPE ALTGMATLLAATTHAPIMAALMVCEMTGEYTLLPGLLLSCVIATTIARWLRPISVYRSH-
CLCB_YERPS ALTGMATLLAATTHAPIMAALMVCEMTGEYTLLPGLLLSCVIATTIARWLRPISVYRSH-
CLCL_RALN1 AVVGMGALLAATTHAPLMSILMIFEMTLSYQVVLPLMLACITGYVTAHATGAPSVYARAL
.:.**.:*********:*: **: *** .* :: *:::*: . . :: *:*
CLCB_ECOLI AQHS------------
CLCB_SHIFL AQHS------------
CLCB_ECO57 AQHS------------
CLCB_ECOL6 AKHS------------
CLCB_SALTI AEH-------------
CLCB_SALTY AEH-------------
CLCB_YERPE ----------------
CLCB_YERPS ----------------
CLCL_RALN1 ARNRDDTLRLPPASSP