CLUSTAL format seed alignment for MF_01218_A
_____________________________________________________________________________
Features found in the protein:
- The following colors are used to highlight features:
- blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
- magenta is used to display DISULFID, THIOLEST and THIOETH.
- red is used for all other features, such as INIT_MET, ACTIVE SITE,
METAL,BINDING, NP_BIND, SITE, REGION, etc.
- The ID of the sequence used as the template for feature propagation is
underlined.
- A '<' at the beginning of a sequence or '>' at the end indicate that
the protein is fused with another domain either at the N- or C-terminus.
_____________________________________________________________________________
UPP_PYRAE --------MPVRIIDHVYAQYLLTKLRDKNTGSIEFRKGLVRLGRIIGYELAK-TFPVKY
UPP_HALSA --MTIEDRGDAHVITHSLAKHTLSRLRDTTTEQVSFRKGLVKLGRISGYEIIDGAMETEF
UPP_PYRFU MIEDKRWGGVYSFEDSPYIMEILTELRDKDTDSIKFRKGLVKLGRYMGYEITK-TMDVEK
UPP_PYRAB MIEDKRWKGVYSFEDSPFIMEILTQLRDKNTDSIEFRKGLVKLGRYMGYELTK-TMEVEK
UPP_SACS2 --------MPLYVIDKPITLHILTQLRDKYTDQINFRKNLVRLGRILGYEISN-TLDYEI
UPP_SULTO --------MPLFVLSKPITLHFLTQLRSKNTDQITFRKTLVRLGRIIGYEILN-MLDYNI
UPP_METTH ---MDGERMMLRVIDNLIVREKLTTIRCRGIDPASFRRGVTDIGRYMAYEFAD-TLKWRE
UPP_AERPE ----MVAAVRVIGGETPLARYVLKVLRDRTTGFPEFRRYVRIAGSILAVYIAG-ELGWVE
*. :* **: : * . : :
UPP_PYRAE VEIETPLG-KAVGVDIIGLDKVVIVQVLRAAMPLVEGLVKAFPQARLGVVAAKRRE----
UPP_HALSA TAFETPLT-ETTGERVTGLDDVVIINVLRAATPFVEGLLKAFPRAKQGVISAGRDEDA-G
UPP_PYRFU VKVETPLE-ETEGIIVKDRRNVVIITVLRAAIPFMEGLIKVFEHARVGIVSAARGK----
UPP_PYRAB VKVETPLE-ETEGIIVKDRRNVVIITVLRAAIPLMEGLIKVFEHARVGIVSAVRGK----
UPP_SACS2 VEVETPLGVKTKGVDITDLNNIVIINILRAAVPLVEGLLKAFPKARQGVIGASRVEVD-G
UPP_SULTO IEVETPLGVKAKGVYIYDLENIVIISILRAATPLVEGLLKALPTARLGVIAASRKETQVN
UPP_METTH VEVETPLG-TASGVEITDRDRIVLLSILRASLPFTEGVMKVFPEAEHGIIGARRSD----
UPP_AERPE EEVETPLG--AKAKELAPAGPVYLVGILGASLPMVEGFASMMPEARIALVAARRVE----
.**** : . : : :: :* *: *: **. . : *. .::.* * .
UPP_PYRAE --EGGVVDVDIFYSKVPKIAED-DVVIVADPMLATGITMSRVIEEVYRAGNPGR---LIV
UPP_HALSA MDADGEFPITVDYVKLPDISEG-DTVIVADPMLATGSTMCTVLDHVTDEMPAAGVEDLFV
UPP_PYRFU ---PPKFEIEMNYIKIPQITPE-DTVIVADPMIATGSTLLRVLEEVKKYGTPKR---TLV
UPP_PYRAB ---APEFKIEMDYVKIPQIKPE-DTVIVADPMIATGSTLTRVLGEVKKYGEPKR---TIV
UPP_SACS2 KEVPKDMDVYIYYKKIPDIRAKVDNVIIADPMIATASTMLKVLEEVVKANPKR----IYI
UPP_SULTO LGYPKEMEVEIFYNKIPEINIK-DNVIIADPMIATASTMLKALNIIKDKKPKR----IFI
UPP_METTH ---EPPFRVSIDYIRVPELDD--KILVIADPMLATGNTMIGILEALEAHGSPAR---TVV
UPP_AERPE --EPGRLKIEVYYSRLPRMFD--GPAVVLDPMLATGKTVAEAVRLARDRG-ASK---VVI
. : : * ::* : :: ***:**. *: : :
UPP_PYRAE VSVIATPMGIERVLSRWPSAEIYAVAVDPTLNDKAFIVPGLGDAGDRAFAT---------
UPP_HALSA LSAVSAPDGLLRVGDQFPDADLLTVAIDDTLTDDGYIVPGLGDAGDRAFRTT--------
UPP_PYRFU VGVLAAPEGITRIKEKFPEVEIFVAKIDRELNDKGYILPGLGDAGDRAFGEPVKITTLPQ
UPP_PYRAB LGVLAAPEGISKIKSEFPDVEIFVAKIDRELDHKGYILPGLGDAGDRAFGEPLKLSTLPQ
UPP_SACS2 VSIISSEYGVNKILSKYPFIYLFTVAIDPELNNKGYILPGLGDAGDRAFG----------
UPP_SULTO VSIIISEYGLKRILESYPDVNIITVSIDPELDNRGYILPGLGDAGDRAFG----------
UPP_METTH FNIISSRMGLDRVLQR--GIDVYTCGVEEEVNDMGYIVPGLGDAGDLAFGRPSD------
UPP_AERPE GSIIASRQGVEYISSLYGDTPIYTLALDPELDENYFIVPGLGDAGDRALGVEP-------
. : : *: : . : . :: : . :*:******** *:
UPP_PYRAE -----
UPP_HALSA -----
UPP_PYRFU VHYIE
UPP_PYRAB VHHIE
UPP_SACS2 -----
UPP_SULTO -----
UPP_METTH -----
UPP_AERPE -----