CLUSTAL format seed alignment for MF_01218_B

_____________________________________________________________________________

Features found in the protein:
The following colors are used to highlight features:
blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
magenta is used to display DISULFID, THIOLEST and THIOETH.
red is used for all other features, such as INIT_MET, ACTIVE SITE,
 METAL,BINDING, NP_BIND, SITE, REGION, etc.
The ID of the sequence used as the template for feature propagation is 
underlined.
An 'X' at the beginning or at the end of a sequence indicates that
the protein is fused with another domain respectively at its N- or
C-terminus.
Sequences that are concerned have a '_P' (for partial) suffix added
to their ID.
_____________________________________________________________________________

UPP_MYCGE        --------MIKKVQHALILNELTKLRDKNTTTSQFRMALNQITSLLFFEATKQ-LPLATV
UPP_MYCPN        --------MIKKVHHALIENELTKLRDKSSSSSQFRMALSQITSLLFFEVTKE-SPLEEI
UPP_UREPA        --------MHKIINHPLIKDKLTRMRKVSTVSTVFRTNLEELTQLMVYEATKD-LELNEI
UPP_METHO        --------MVKIFQHPLINAKLTTMRSKETSYKDFRDNLNEIASLMVYETLRD-YQTKKI
UPP_MYCPU        --------MLKVIDHPLIKQKLSVIRSQKAGHDVFRKNVIEIASLMTYEVFRN-YKLKEI
UPP_FUSNN        -------MSVIEINHPLIEHKMTILRSVDTDTKSFRENLNEIAKLMTYEATKN-LKLETT
UPP_BACCL        ------MGKVYVFDHPLIQHKLTYIRDKNTGTKEFRELVDEVATLMAFEITRD-LPLEEV
UPP_BACSU        ------MGKVYVFDHPLIQHKLTYIRNENTGTKDFRELVDEVATLMAFEITRD-LPLEEV
UPP_HALH5        ------MSKVYVFDHPLIQHKLTYIRDKSTGTKEFRELVDEVAALMAFEITRD-LPLQEV
UPP_STAAM        ------MSKVHVFDHPLIQHKLSYIRDVNTGTKEFRELVDEVGMLMAYEVTRD-LELQDV
UPP_LISMO        ------MANVHVINHPLVQHKLTIIRDKNTGTKAFRELVDEVATLMAYEITRD-MELEDI
UPP_LACPL        ------MGKFEVLDHPLIQHKLTIIREKNCGTKVFREMVNEISTLMAYEVSRD-MPLKDI
UPP_STRP1        ------MGKCQVISHPLIQHKLSILRRQTTSTKDFRELVNEIAMLMGYEVSRD-LPLEDV
UPP_LATSK        ------MAKFTVLNHPLIQHKLTIIRNKNTGTKVFREVANEIAELMVYEITRD-LAMEDV
UPP_CLOAB        ------MSKVTQISHPLILHKLAFMRDKKTGSKDFREMVEEVAMLMAYEVTRE-MQLETV
UPP_CLOPE        ------MSKVTEITHPLILHKLAFIRDKNTGSKDFRELVSEVSMLMAYEVTRN-LPMEEI
UPP_CALS4        -----MYENVFVIDHPLIQHKISLIRDENTGSKEFRELVGEIAMLMAYEVTRD-LPLEEI
UPP_DEIRA        -----MCLMVTLVEHPLVQHKLSLMRDERTGVKEFRELAGELSLLLAYEAMRD-LEVEPV
UPP_THEMA        ------MKNLVVVDHPLIKHKLTIMRDKNTGPKEFRELLREITLLLAYEATRH-LKCEEV
UPP_RHILO        ------MKGVTVVDHPLVQHKLTIMRKKETSTAGFRRLLREISLLLGYEVTRN-LELTTT
UPP_RHIME        ------MDGVTVIGHPLVQHKLTIMRKKETSTAGFRRLLKEISTLLCYEVTRD-LELTTE
UPP_CAUVC        ------MSNVTVVSHPLVQHKLTKMRDKTTSTKTFRALMRETATLICYEVTRD-LPMDEV
UPP_RALN1        MTQDPRFPNLFILNHPLIQHKLTHMRDKDTSTRTFRELLREITLLMGYEITRN-LPLTTR
UPP_CHLMU_P      XLSSKPLAAVYVLSHPLIQHKASLLRNKNTKSKIFRECLKEISLGVCYEATRD-LALKNI
UPP_ECOLI        -------MKIVEVKHPLVKHKLGLMREQDISTKRFRELASEVGSLLTYEATAD-LETEKV
UPP_PSEAE        -------MPVHEIRHPLIRHKLGLMRRADISTKNFRELAQEVGALLTYEATKD-LPLEQY
UPP_NEIMB        -------MNVNVINHPLVRHKLTLMREADCSTYKFRTLATELARLMAYEASRD-FEIEKY
UPP_MYCTU        -------MQVHVVDHPLAAARLTTLRDERTDNAGFRAALRELTLLLIYEATRD-APCEPV
UPP_CORGL        -------MDITIVNHPLVASRLTLLRDERSDNAAFRAAANDLGAMLIYEASRD-LEVEHF
UPP_STRCO        -------MRLHVVDHPLVAHKLTTLRDQRTDSATFRRLADELVTLLAYEATRD-VRTEQV
UPP_CAMJE        ------MKNIHCINHPLIEHKLGILRAKETKPFQFRMLIDEISSFLLFEASKD-FSLKEI
UPP_AQUAE        --------MIVELSHPLIKHKVNTARIQDTSAEKLRKTLKELGFMLVYEALKD-ILLEEK
UPP_SYNY3        ---MASQLRVYVPEHPLIKHWLGVARDENTPPVLFKTAMGELGRWLTYEAARYWLPTVDT
UPP_NOSS1        ---MTVQLRVYVPPHPLIKHWLAVARDAATPSVLFRSAITELGRWLTYEAAREWLPTEET
                               *.*        *        ::    :    : :*           

UPP_MYCGE        EVETPFAK-TKGYKLKND-IVLVPIMRAGLGMIDAIVRYSDKIRVGHLGIYRQTQTTSVI
UPP_MYCPN        VVKTPFTK-TKGYKLKNE-IVLVPIMRAGLGMVDPIVRYSEKIRVGHLGIYREHEGTNVI
UPP_UREPA        EIETPVVKVAKGYKLKNK-ICLIPILRAGIGMVDGVKSLIPTATIGHIGLYRNEQTLKPV
UPP_METHO        SITTPMNVKYEGETLDRE-IVIIPILRAGLGMLNGIMNLVPQARVGHIGMYRNEETNEVV
UPP_MYCPU        KIDTPVAQDVLAYDYDKE-IVIVAILRAGLAMVPGIVNLLPKARVGHIGIFRDEKTFEPN
UPP_FUSNN        EVTTPLMK-TQAYTLQDK-VALVPILRAGLGMVDGILDLIPTAKVGHIGVYRNEETLEPV
UPP_BACCL        EIETPVSKARAKVIAGKK-LGVIPILRAGIGMVDGILKLIPAAKVGHIGLYRDPQTLKPV
UPP_BACSU        DINTPVQAAKSKVISGKK-LGVVPILRAGLGMVDGILKLIPAAKVGHVGLYRDPETLKPV
UPP_HALH5        TVETPVGPATSKKIAGKK-LGLVPILRAGLGMVDGILRMIPAAKVGHVGLYRDPETLQPV
UPP_STAAM        DIETPVTKMTAKRLAGKK-LAIVPILRAGLGMTDGILSLVPAARVGHIGLYRDPETLKAV
UPP_LISMO        QVETPLQTTTAKTLTGKK-LGIVPILRAGLGMQDGILKLIPAAKVGHVGLYRDHDTLEPV
UPP_LACPL        EIETPIAKSTQKTLAGKK-VAIVPILRAGLGMVDGFLNMIPAAKVGHVGMYRDEKTLKPV
UPP_STRP1        DIQTPVSKTVQKQLAGKK-LAIVPILRAGIGMVDGLLSLVPAAKVGHIGMYRNEETLEPV
UPP_LATSK        EVETPMGPAIEKQLSGKK-LAVVPILRAGLGMVDGVLELIPAAKVGHIGMYRDEKTLQPH
UPP_CLOAB        EIETPICITKCKMLAGKK-VAIVPILRAGLGMVNGVLKLIPAAKVGHIGLYRDEKTLKPV
UPP_CLOPE        EIETPVCKTKCKVLAGKK-VAIVPILRAGLGMVDGMLQLIPAAKVGHIGLYRDEETLQPV
UPP_CALS4        EVKTPIAVAKTKVIAGKK-LGIIPILRAGLVMADGMLKLIPTAKVGHIGIYRDPETLKPV
UPP_DEIRA        RFATPIEEGDFPMLSGKK-LALVAILRAGLVMTDAIVTLVPAAKVGHIGMYRDPQSLAPV
UPP_THEMA        EVETPITKTIGYRINDKD-IVVVPILRAGLVMADGILELLPNASVGHIGIYRDPETLQAV
UPP_RHILO        TIETPIETMEAPTLEGKK-LVFASVLRAGNGLLEGLLDLVPAARVAHIGLYRDHETLEAV
UPP_RHIME        RIETPLVETDAPVLEGKK-LVFASILRAGNGLLEGMLELVPSARVAHIGVYRDHETLQAV
UPP_CAUVC        QIETPVAPTKAYEIAGKK-LVFAPILRTGLGMCEGMLDLVPSARVAHIGLYRDHETLEAV
UPP_RALN1        HIETPMGPMDAPVIAGRK-LAVVPVLRAGVGMSDGLLELIPSARVGHIGVYRD-EQHRPV
UPP_CHLMU_P      SIQTPLMQAECPHLTGTK-IVVIPVLRAGLGMVDGFLALVPNAKVGLIGMSRNHETFQPS
UPP_ECOLI        TIEGWNGPVEIDQIKGKK-ITVVPILRAGLGMMDGVLENVPSARISVVGMYRNEETLEPV
UPP_PSEAE        EIPGWAGPVTVEKISGKK-ITVVPILRAGIGMLDGVLSLIPGAKVSAVGVARNEETLEAR
UPP_NEIMB        LIDGWCGQIEGDRIKGKT-LTVVPILRAGLGMLDGVLDLIPTAKISVVGLQRDEETLKPI
UPP_MYCTU        PIRTPLAETVGSRLTKP--PLLVPVLRAGLGMVDEAHAALPEAHVGFVGVARDEQTHQPV
UPP_CORGL        DTKTPVAMAEGTRLKQP--PIIVPIIRAGLGMIDPALSMIPDAQVGFIGLARDEETHEPV
UPP_STRCO        DIHTPVSRTTGVKLSHPR-PLVVPILRAGLGMLDGMVRLLPTAEVGFLGMVRNEETLQAS
UPP_CAMJE        EISTPIQKTTVKKLDEK--IMICPILRAALGMLESVFKMIPDASVGFLGFVRNEETLKAD
UPP_AQUAE        EVRTWIGNKRFNYLNEEE-IVFVPILRAGLSFLEGALQVVPNAKVGFLGIKRNEETLESH
UPP_SYNY3        EVKTPLAIAKASLIDPQTPFVIVPILRAGLALVEGAQGLLPLAKIYHLGLVRNETTLEPS
UPP_NOSS1        TVQTPLEICPATVINPQVPVAVVPILRAGLGLLEGAQTVLPLASIYHLGLVRNEETLEAS
                                      . .::*:.  :            :  :*. *:       

UPP_MYCGE        SYYKKMPENIS-DSHVIILDPMLATGTTLLTAIKSIKEDKPIK--ISVIAIVAAPEGINK
UPP_MYCPN        SYYKKMPENIG-NSHVIILDPMLATGTTLATAISSIKKNHPIK--ISVVAIVAAPEGIKA
UPP_UREPA        EYFKKFPKNIS-ESDVIILDPMLATGGSVVEAVNIIKKYNPKS--IKFVCIVAAPEGLKY
UPP_METHO        EYFFKIPEVPH-DSYIIIVDPMLATGSSACDAIAKLDKLGFNN--IKLVCLVGVQQGIDK
UPP_MYCPU        NYFYKIPDVPK-DSEILIVDPMLATGNSAVYAIERLKKDGFKN--IRLLSLVGVQEGVDN
UPP_FUSNN        YYYCKLPTDIA-SRKVILVDPMLATGGSAVYAIDYLKEQGVTD--IIFMCLVAAPDGIAR
UPP_BACCL        EYYVKLPSDVE-ERDFIIVDPMLATGGSAVAAIDALKKRGAKS--IKFMCLIAAPGRVKA
UPP_BACSU        EYYVKLPSDVE-EREFIVVDPMLATGGSAVEAIHSLKKRGAKN--IRFMCLVAAPEGVEE
UPP_HALH5        EYYVKLPTDVE-ERELIVIDPMLATGGSAVEAINCLKKRGATS--IKLMCLIAAPEGVEV
UPP_STAAM        EYFAKLPQDIT-ERQIIVVDPMLATGASAIEAITSLKKRGAKN--IRFMCLIAAPEGVEK
UPP_LISMO        EYFVKLPSDVE-ERLFIVVDPMLATGGSAIMAIDCLKKRGARN--MKFMCLVAAPEGVKA
UPP_LACPL        EYFVKLPSDIS-QRQLFVVDPMLATGGSAIMAMDMLKKRGASN--IKFMCLVAAPEGVKA
UPP_STRP1        EYLVKLPEDIN-QRQIFLVDPMLATGGSAILAVDSLKKRGAAN--IKFVCLVAAPEGVKK
UPP_LATSK        EYFVKLPTDID-QRQLFIVDPMLATGGSAIMAIDALKKRGATS--MRLVVLVAAPEGVKA
UPP_CLOAB        EYFCKLPQDIE-ERDIIVTDPMLATGGSAIDAITLLKKRGAKY--IRLMCLIGAPEGIAA
UPP_CLOPE        EYFCKLPQDIA-ERDVIVVDPMLATGGSAADAITLLKKRGAKQ--IRLMCLISSPEGIEF
UPP_CALS4        EYYCKLPSDIA-ERDLIVVDPMLATGGSASAAIHFLKERGAQS--IKLVNLIAAPEGIKA
UPP_DEIRA        AYYSKLPADIA-ERRVFLTDPMLATGGSANAAIQNLKDAGAQS--IKLMTILAAPEGIHA
UPP_THEMA        EYYAKLPPLND-DKEVFLLDPMLATGVSSIKAIEILKENGAKK--ITLVALIAAPEGVEA
UPP_RHILO        EYFFKAPSDLA-DRLVIVVDPMLATANSAIAAIDKLKGRGATN--IRFLCLLAAPEGIER
UPP_RHIME        EYFFKAPDNIN-ERLVIVVDPMLATGNSAIAAIEKLKERGARN--IRFLCLLAAPEGIRN
UPP_CAUVC        EYYFKAPEDIA-GRLVIVVDPMLATGHSAIAAIARLKHYGVTN--LRFVCLLAAQAGVDA
UPP_RALN1        EYLVRLP-DLE-ERTFILCDPMVATGHSAVHAVDVMKQRGVPDEHILFLALVAAPEGVEV
UPP_CHLMU_P      SYCCKLPEDIA-DCHVFIVDPMLATGGSASATIQLVKEHGAKN--ITLLNVLAVPEGIER
UPP_ECOLI        PYFQKLVSNID-ERMALIVDPMLATGGSVIATIDLLKKAGCSS--IKVLVLVAAPEGIAA
UPP_PSEAE        TYLEKLAPDIA-ERRSLIIDPMLATGGSMVATIDLLKKAGSKE--IRAMVLVAAPEGIEA
UPP_NEIMB        SYFEKFVDSMD-ERPALIIDPMLATGGSMVATIDLLKAKGCKN--IKALVLVAAPEGVKA
UPP_MYCTU        PYLDSLPDDLT-DVPVMVLDPMVATGGSMTHTLGLLISRGAAD--ITVLCVVAAPEGIAA
UPP_CORGL        PYLEALPQDLS-NQPVFLVDPMLATGGSLLHAIRLLADRGATD--ITAICMVSAQPGVDA
UPP_STRCO        TYATRMPDDLS-GRQVYVLDPMLATGGTLVASIRELIKRGADD--VTAVVLLAAPEGVEL
UPP_CAMJE        FYFQKLPKDAK-KRTAIVIDPMFATGGTAIDACNFLKSQGVKK--IKFISILAAPQGLKK
UPP_AQUAE        IYYSRLP-ELK-GKIVVILDPMLATGGTLEVALREILKHSPLK--VKSVHAIAAPEGLKR
UPP_SYNY3        LYLNKLPERFAPGTHLLLLDPMLATGNTIMAALDLLMARDIDANLIRLVSVVAAPTALQK
UPP_NOSS1        CYLNKLPEKFDPQTRVLITDPMLATGGSIMKAMSELTERGVDPSLVRIVSVVAAPPALQK
                  *               : ***.**. :   :   :         :  :  :.    :  

UPP_MYCGE        VEKM-H-PHVDIFLAAIDEKLNDNRYIIPGLGDAGDRLFGTK----
UPP_MYCPN        VEAA-H-PDVDIYLAAIDEKLNKDNYIIPGLGDAGDRLFGTK----
UPP_UREPA        VQEV-H-PEVDVYIAALDDKLNENGYITPGLGDAGDRIFGTK----
UPP_METHO        VTKQ-F-PNVDIYLASKDEKLNEHNYILPGLGDAGDRIFGTKIK--
UPP_MYCPU        IEKN-VGKDFPIFLGSLDEKLNDKKYIVPGLGDAGDRIFGTK----
UPP_FUSNN        LLNK-H-PDVPIYTAKIDQGLNENGYIYPGLGDCGDRIFGTK----
UPP_BACCL        VETA-H-PDVDIYIAALDERLNDHGYIVPGLGDAGDRLFGTK----
UPP_BACSU        LQKH-H-SDVDIYIAALDEKLNEKGYIVPGLGDAGDRMFGTK----
UPP_HALH5        VKEA-H-PDVDIYLAALDEKLNEKGYIVPGLGDAGDRLFGTK----
UPP_STAAM        MHEA-H-PDVDIYIAALDEKLNDKAYITPGLGDAGDRLFGTK----
UPP_LISMO        LQDA-H-PDVEIYVAGLDEKLDENGYIRPGLGDAGDRLFGTK----
UPP_LACPL        LRDA-H-PDIDVYTAALDDHLNEDGYIVPGLGDAGDRLFGTK----
UPP_STRP1        LQEA-H-PDIDIFTAALDDHLNEHGYIVPGLGDAGDRLFGTK----
UPP_LATSK        VQEA-H-PDVDIYAAGLDDGLNEEGYIYPGLGDAGDRLFGTK----
UPP_CLOAB        VQEA-H-PDVDIYLASIDEKLDENGYIVPGLGDAGDRLFGTK----
UPP_CLOPE        VQKA-H-PDVDIYVACIDEKLNDHGYIVPGLGDAGDRLFGTK----
UPP_CALS4        VHKD-H-PEVPIYVASIDQGLNEHGYIVPGLGDAGDRLFGTK----
UPP_DEIRA        VQQA-H-PDVDIVTASVDSRLNDHGYIVPGLGDAGDRIYGTK----
UPP_THEMA        VEKK-Y-EDVKIYVAALDERLNDHGYIIPGLGDAGDRLFRTK----
UPP_RHILO        FTKA-H-PDVPVFTASIDRQLNEKGYIMPGLGDAGDRMYGTK----
UPP_RHIME        FQGA-H-PDVPIFTASIDSHLNEKGYIVPGLGDAGDRMYGTK----
UPP_CAUVC        LREA-H-PDVPIWTAAIDQTLNDHGYIVPGLGDAGDRTFGTR----
UPP_RALN1        FQQA-H-PGVKLYVASLDSHLNEHAYIIPGLGDAGDRLFGTKN---
UPP_CHLMU_P      IQKD-H-PDVTIYVASLDEKLNESAYILPGLGDAGDRLCGTSNPS-
UPP_ECOLI        LEKA-H-PDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGTK----
UPP_PSEAE        VRKA-H-PDVIIYTASIDEKLDENGYIIPGLGDAGDKIFGTKQKEA
UPP_NEIMB        VNDA-H-PDVTIYTAALDSHLNENGYIIPGLGDAGDKIFGTR----
UPP_MYCTU        LQK--AAPNVRLFTAAIDEGLNEVAYIVPGLGDAGDRQFGPR----
UPP_CORGL        LAE--SGLPVRLVTATIDPGLDENAYIVPGLGDAGDRLYGPRNIDL
UPP_STRCO        MERELAGTPVTVVTASVDERLNEQGYIVPGLGDAGDRMYGAAE---
UPP_CAMJE        FSQM-H-DDVEVFVACIDEGLNEKGYIIPGLGDAGDRVFNTL----
UPP_AQUAE        IEEKFK--EVEIFVGNVDERLNDKGYIIPGLGDIGDRLYAVSVY--
UPP_SYNY3        LSNA-H-PNLTIYTAMIDEQLNDRGYIVPGLGDAGDRCFGT-----
UPP_NOSS1        LNAA-Y-SGLIVYTATIDETVNDQGFIVPGLGDAGDRIFGT-----
                 .        . :  .  *  ::.  :* ***** **: