CLUSTAL format seed alignment for MF_01242

_____________________________________________________________________________

Features found in the protein:
The following colors are used to highlight features:
blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
magenta is used to display DISULFID, THIOLEST and THIOETH.
red is used for all other features, such as INIT_MET, ACTIVE SITE,
 METAL,BINDING, NP_BIND, SITE, REGION, etc.
The ID of the sequence used as the template for feature propagation is 
underlined.
A '<' at the beginning of a sequence or '>' at the end indicate that
 the protein is fused with another domain either at the N- or C-terminus.
_____________________________________________________________________________

AMIE_BACSP      MRHGDISSSHDTVGIAVVNYKMPRLHTKAEVIENAKKIADMVVGMKQGLPGMDLVVFPEY
AMIE_GEOSE      MRHGDISSSHDTVGVAVVNYKMPRLHTKKEVIENAKNIANMIVGMKQGLPGMDLVIFPEY
AMIE_BRADU      MLHGDISSSNDTVGVAVVNYKMPRLHTKAEVLDNARKIADMVVGMKVGLPGMDLVIFPEY
AMIE_PSEAE      MRHGDISSSNDTVGVAVVNYKMPRLHTAAEVLDNARKIAEMIVGMKQGLPGMDLVVFPEY
AMIE_RHOER      MRHGDISSSNDTVGVAVVNYKMPRLHDRAGVLENARKIADMMIGMKTGLPGMDLVVFPEY
AMIE_HELPY      MRHGDISSSPDTVGVAVVNYKMPRLHTKNEVLENCRNIAKVIGGVKQGLPGLDLIIFPEY
AMIE_HELPJ      MRHGDISSSPDTVGVAVVNYKMPRLHTKNEVLENCRNIAKVIGGVKQGLPGLDLIIFPEY
                * ******* ****:***********    *::*.::**.:: *:* ****:**::****

AMIE_BACSP      STMGIMYDQDEMFATAASIPGEETAIFAEACKKADTWGVFSLTGEKHEDHPNKAPYNTLV
AMIE_GEOSE      STMGIMYDRKEMFETATTIPGPETEIFAEACRKANTWGVFSLTGEQHEEHPHKNPYNTLV
AMIE_BRADU      STQGIMYDSKEMYETASAVPGEETAIFAEACRKAKVWGVFSLTGERHEEHPHKAPYNTLI
AMIE_PSEAE      SLQGIMYDPAEMMETAVAIPGEETEIFSRACRKANVWGVFSLTGERHEEHPRKAPYNTLV
AMIE_RHOER      STQGIMYNEEEMYATAATIPGDETAIFSAACREADTWGIFSITGEQHEDHPNKPPYNTLI
AMIE_HELPY      STHGIMYDRQEMFDTAASVPGEETAIFAEACKKNKVWGVFSLTGEKHEQAK-KNPYNTLI
AMIE_HELPJ      STHGIMYDRQEMFDTAASVPGEETAILAEACKKNKVWGVFSLTGEKHEQAK-KNPYNTLI
                *  ****:  **  ** ::** ** *:: **:: ..**:**:***:**:   * *****:

AMIE_BACSP      LINNKGEIVQKYRKIIPWCPIEGWYPGDTTYVTEGPKGLKISLIVCDDGNYPEIWRDCAM
AMIE_GEOSE      LINNKGEIVQKYRKIIPWCPIEGWYPGDTTYVTEGPKGIKISLIICDDGNYPEIWRDCAM
AMIE_BRADU      LMNDKGEIVQKYRKIMPWVPIEGWYPGNCTYVSEGPKGLKVSLIICDDGNYPEIWRDCAM
AMIE_PSEAE      LIDNNGEIVQKYRKIIPWCPIEGWYPGGQTYVSEGPKGMKISLIICDDGNYPEIWRDCAM
AMIE_RHOER      LIDNKGEIVQRYRKILPWCPIEGWYPGDTTYVTEGPKGLKISLIICDDGNYPEIWRDCAM
AMIE_HELPY      LVNDKGEIVQKYRKILPWCPIECWYPGDKTYVVDGPKGLKVSLIICDDGNYPEIWRDCAM
AMIE_HELPJ      LVNDKGEIVQKYRKILPWCPIECWYPGDKTYVVDGPKGLKVSLIICDDGNYPEIWRDCAM
                *::::*****:****:** *** ****. *** :****:*:***:***************

AMIE_BACSP      KGAELIVRCQGYMYPAKEQQIMMAKAMAWANNTYVAVANATGFDGVYSYFGHSAIIGFDG
AMIE_GEOSE      KGAELIVRCQGYMYPAKEQQIMMAKTMAWANNVYVAVANATGFDGVYSYFGHSAIIGFDG
AMIE_BRADU      KGAELIVRCQGYMYPAKEQQVLISKAMAWANNVYVAVANAAGFDGVYSYFGHSAIIGFDG
AMIE_PSEAE      KGAELIVRCQGYMYPAKDQQVMMAKAMAWANNCYVAVANAAGFDGVYSYFGHSAIIGFDG
AMIE_RHOER      KGAELIVRCQGYMYPAKDQQVMMSKAMAWANNCYVAVANAAGFDGVYSYFGHSAIIGFDG
AMIE_HELPY      RGAELIVRCQGYMYPAKEQQIAIVKAMAWANQCYVAVANATGFDGVYSYFGHSSIIGFDG
AMIE_HELPJ      RGAELIVRCQGYMYPAKEQQIAIVKAMAWANQCYVAVANATGFDGVYSYFGHSSIIGFDG
                :****************:**: : *:*****: *******:************:******

AMIE_BACSP      RTLGECGTEENGIQYAEVSISQIRDFRKNAQSQNHLFKLLHRGYTGLINSGEGDRGVAEC
AMIE_GEOSE      RTLGECGEEENGIQYAEISLSQIRDFRQNAQSQNHLFKLLHRGYTGIIQSGEGDKGVAEC
AMIE_BRADU      RTLGECGEEDYGIQYAQLSKHLIRDARRNGQSQNHLYKLVHRGYTGMINSGESPRGVAAC
AMIE_PSEAE      RTLGECGEEEMGIQYAQLSLSQIRDARANDQSQNHLFKILHRGYSGLQASGDGDRGLAEC
AMIE_RHOER      RTLGETGEEEYGIQYAQLSVSAIRDARENDQSQNHIFKLLHRGYSGVHAAGDGDKGVADC
AMIE_HELPY      HTLGECGEEENGLQYAQLSVQQIRDARKYDQSQNQLFKLLHRGYSGVFASGDGDKGVAEC
AMIE_HELPJ      HTLGECGEEENGLQYAQLSVQQIRDARKYDQSQNQLFKLLHRGYSGVFASGDGDKGVAEC
                :**** * *: *:***::*   *** *   ****:::*::****:*:  :*:. :*:* *

AMIE_BACSP      PFDFYRTWVLDAEKARENVEKITRSTVGTAECPIQGIPNEGKTKEIGV
AMIE_GEOSE      PFDFYRTWVMDAEKARENVEKITRTTIGTAECPIEGIPHEGKEKEASV
AMIE_BRADU      PYDFYKNWIKDPEGTRDMVEAMTRSTPGTDECPIEGIPNEAAASNY--
AMIE_PSEAE      PFEFYRTWVTDAEKARENVERLTRSTTGVAQCPVGRLPYEGLEKEA--
AMIE_RHOER      PFEFYKLWVTDAQKAQERVEAITRDTVGVADCRVGNLPVEKTVEA---
AMIE_HELPY      PFEFYKTWVNDPKKAQENVEKITRPSVGVAACPVGDLPTK--------
AMIE_HELPJ      PFEFYKTWVNDPKKAQENVEKFTRPSVGVAACPVGDLPTK--------
                *::**: *: *.: ::: ** :** : *.  * :  :* :