CLUSTAL format seed alignment for MF_01325_A
_____________________________________________________________________________
Features found in the protein:
- The following colors are used to highlight features:
- blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
- magenta is used to display DISULFID, THIOLEST and THIOETH.
- red is used for all other features, such as INIT_MET, ACTIVE SITE,
METAL,BINDING, NP_BIND, SITE, REGION, etc.
- The ID of the sequence used as the template for feature propagation is
underlined.
- A '<' at the beginning of a sequence or '>' at the end indicate that
the protein is fused with another domain either at the N- or C-terminus.
_____________________________________________________________________________
RL3_METAC ---MASIH--RPKRGSLAFSPRKRAKSHIPRFRAWPEATG-EPKLQSFAGYKVGMTHVIM
RL3_METMA ---MASIH--RPKRGSLAFSPRKRAKSHIPRFRAWPEATG-EPKLQSFAGYKVGMTHVIM
RL3_METH6 ---MATIH--RPRRGSLAFSPRKRAKSQVPRTRYWAAGEE-KARMDGFAGYKAGMTHIIM
RL3_HALSA ---MPQPN--RPRKGSMGFSPRKRAESEVPRFNSWPADDG-EVGLQGFAGYKAGMTHVVL
RL3_HALMA ---MPQPS--RPRKGSLGFGPRKRSTSETPRFNSWPSDDG-QPGVQGFAGYKAGMTHVVL
RL3_ARCFU ----MKYH--RPRRGSLAFSPRKRAKSIVPRIRAWPECD--RVRMQGFAGYKAGMTHVVM
RL3_METJA --MGLNIN--RPRRGSLAFSPRKRAKRPVPRIRSWPEED--TVRLQAFPVYKAGMSHAFI
RL3_METVA --MGMKKN--RPRRGSLAFSPRKRAKKLVPKIRSWPADK--KVGLQAFPVYKAGTTHALL
RL3_METTH ---MARHH--QPRKGSVAFSPRKRAARETPRVKSWPQVD--EPGLLALAGYKAGMTHVMM
RL3_METKA MGRGGRRNPGRPRRGSLAFSPRKRASRPVPRIRSWPDEE--RVRVQGFAGYKAGMTHAIM
RL3_THEAC ---MATPH--HSRRGSMAYYPRVRAKSVDPKIRSWPEIKG-EVKVQGFAGFKVGMTHVEM
RL3_THEVO ---MATPH--HSRRGSMAYYPRVRAKSIEPRIRSWPEISG-PVKVQGFAGFKVGMTHVEM
RL3_SACS2 ---MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSQNPKLLGFVGYKVGMTHVFM
RL3_SULTO ---MGHRKLASPRRGSAGVRPRKRASEILPTPRSWPTIQSNEPKLLGFVGYKVGMSHIFM
RL3_AERPE ---MGARKKRAPRRGSLGFSPRKRASRLVPRVKRWPEVDIGKPVPLAFLGYRAGMTHVFM
RL3_PYRAE ---MGL-KINRPRRGSMGVYPRKRAADIVPRVRTWPEVNLGKPALLGFAAYKAGMLHAVV
RL3_PYRAB ---MGKVH--RPRRGSLAFSPRKRAKSIVPRIRSWPKET--EVRMLGFAGYKAGMTHILM
RL3_PYRHO ---MGKIH--RPRKGSLAFSPRKRAKSIVPRIRSWPKET--EVRMLGFAGYKAGMTHILM
RL3_PYRFU ---MGKVH--RPRRGSLGFSPRKRAKSIVPRIRSWPKET--EVRMLGFAGYKAGMTHILM
RL3_NANEQ ---MPQHGRHAPRRGSMGFWPRKRASRIYPRIKTWPKIE--EIKPLAFAAYKVGMTHTIL
A9A5J4_NITMS ---MGARKRHSPRRGSLAYSPRVRAKSMEARIRAWPKLDSEEPKILAHCGFKAGCVQIVS
.::** . ** *: . . *. . ::.* :
RL3_METAC VDDTKNSLTQGMEISVPVTVIETPAIRVAAIRAYAEDS-T-GEKAIAEVWAADLDP----
RL3_METMA VDDIKNSLTQGMEISVPVTVIETPAIRVAAVRAYTEDS-T-GEKAIAEAWAADLDS----
RL3_METH6 IDDKPNSLTEGMEISVPVTILETPPLSIAALRVYEKYN-G-GVRAAGEAWSDKLDP----
RL3_HALSA VDDKANAPTEGMETTVPVTVVETPPMRAAAVRLYEDTP-Y-GKKPLTEVWADDTHE----
RL3_HALMA VNDEPNSPREGMEETVPVTVIETPPMRAVALRAYEDTP-Y-GQRPLTEVWTDEFHS----
RL3_ARCFU IDDRKNSPTYGEEVVVPVTVIETPPMKVAAVRVYKKTQ-Y-GMQIAAEVWSNNLDD----
RL3_METJA KEDNPKSPNAGQEVFTPITILEAPPINVCAIRVYGRNE-RNYLTTLTEVWADNLDK----
RL3_METVA VENNPKSPNNGQEVFSPVTVLETPEITVAGIRAYGKTT-K-GLKALTEVWAKQQDK----
RL3_METTH VDNQKNSPTEGMEVSTPVTILEVPPLTVMAVRTYEKTS-R-GLKTLGEVLATETKD----
RL3_METKA IDDWPNSPTEGEEISVPVTILDAPPMYVAAIRAYAPTP-D-GYRCVTEAWAEIPEEL---
RL3_THEAC IDYRKKSVTAGQPILVPVTVVEVPPLDVVGYRLYDEDA-EGNLVVVFEAWAKDLDK----
RL3_THEVO VDYRKTSVTAGQPIFVPVTVIEVPPLDVIGIRLYDEDE-EGNMVVVYEKWTQNLDK----
RL3_SACS2 IDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAIDG-KGEPNVITEYWSSSSLQFL--
RL3_SULTO IDDKPTSPNYGKEIYVPVSVIETPPVIPLAIRAYVMGP-KGEPTTLTEYWGDISEDLL--
RL3_AERPE VDDRPGRPTSGKEIFVPVTIVETPPMFVAAVRLYGYDP-NRGRYSLGEAWAQPPPE-L--
RL3_PYRAE VDDRPTSPLYGKEVVKAVTVLDAPPLYVWGFRLYTLDPTNGYKRAVAEVWASELPK----
RL3_PYRAB IDDEP-GLTNGKEIFMPVTIIETPPLRVFGIRAYRQGYLGLETATEVIVPDFELDNYV--
RL3_PYRHO IDDEP-GLTNGKEIFMPVTIIETPPLRVFGIRAYRQGYLGLETAGEVIVPDFELDNYTP-
RL3_PYRFU IDDEP-GLTNGKEIFMPVTIIETPPLRVFGIRAYRMGYLGLETATEVIVPDFPLDNYPAK
RL3_NANEQ -------NINGERVFTPVTVLEAPELLVIGAKAYKKEN--GALKEISSLYFNDLPQ----
A9A5J4_NITMS IDDREKVPNAGKQLVSLGTVLVTPPVLILGIRGYSKDH--DGLHAEFDVYAEDIPK----
* ::: .* : . : *
RL3_METAC --------------ELKRRIPIPAAG-NQAE-----------ALENIGKLIEEGRVSDVR
RL3_METMA --------------ELKRRIPIPAAG-NQAE-----------GLENIGKLIEEGRVSDIR
RL3_METH6 --------------SLARSITVPK-N-KRGA-----------AIDEIGAIIED--MEELR
RL3_HALSA --------------SLDRTLSVPDE----GG-----------DTDELIEALDTEEIADIR
RL3_HALMA --------------ELDRTLDVPEDH-DPDA-----------AEEQIRDAHEAGDLGDLR
RL3_ARCFU --------------FLDRRLNLPK----KEP-----------DVEKLKAAVENG-ASEVR
RL3_METJA --------------ELERKIKLPKKE--DRK-----------TVEDLEALKDK--IEDVR
RL3_METVA --------------ELGRKLTVTKKE--EIK-----------TVESLDAVLEK--TVDLR
RL3_METTH --------------DLRRKLTPPADDYDQEA-----------AIEKIRSNMEY--VADVR
RL3_METKA --------------EMDRVFTVPKDG--EAG-----------DLDKIEELVDEGIVEEIR
RL3_THEAC --------------EIFRKIPEIKKV-------------------AERDPPES--YEDVR
RL3_THEVO --------------ELFKKITTFKEV-------------------KEKPVPET--YADVR
RL3_SACS2 --------------DITRRIHSISSFLKDDESKKKFDERFNTKLDLIKSNLDR--IVYFR
RL3_SULTO --------------KLIQQ-RKVTRLKIDKE-------KMKGKLDEINNKLND--ILYLR
RL3_AERPE --------------ELQRRISTLGSFDTDKM------------LKSLEERLDK--AEDVR
RL3_PYRAE --------------FLHRVLTLPEKLDVDKQ------------LKKVEEFRDV--AVDVR
RL3_PYRAB SKKAKGR-KFTFYQLLKRRIATLPKNYTKDD--------FEQKLGNLEDMIKEGEIVEVR
RL3_PYRHO SKKGKGR-KFTFYQFLGRRIATLPKDYTQEE--------FEQKLGALEDMIKEGEIVEVR
RL3_PYRFU ERKGKPKPKMTFYKLLERRIATLPKNYTQEM--------FEQKLGQLEDMIKEGEIVDVR
RL3_NANEQ --------------YVFRKIPKLKNYNFEEK------------KEQFLSKADN--ADEVK
A9A5J4_NITMS --------------SIAKEISLKNKQ-----------------ENALDNAEKSLKKIKEI
: : .
RL3_METAC AVIYTLPKSLTGVPKKVPDIMESGIS-ARDLGTKFEYSKTIL--GTLVSVTDVFKNGTLV
RL3_METMA AVTYTLPKSLTGVPKKVPDIMESGIS-AKDLGAKFEYAKSIL--GNLVNVTDVFKNGTVV
RL3_METH6 LIAHTNPKLLTGVPKKNPDLMEIQVN-GGNIANQFELAKSLL--GSSVPISSIFSPGSII
RL3_HALSA VITHTVPGDTAGVPKKNPDVMETRVG-GGTLADRLEFAADLIEDGGVHAFGDVFRAGEFT
RL3_HALMA LITHTVPDAVPSVPKKKPDVMETRVG-GGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYA
RL3_ARCFU VVTYTQPYLITGVPKKVPDVMEHRI--GGNVEEALDYAISKL--GKEISVSEVFDEGAII
RL3_METJA VLVHTNPK-LTCLPKKKPEILEIRIG-GKDIEERLNYAKEIL--GKQLNITDVFQEGELV
RL3_METVA VIVHTNPK-TTGIPKKKPEVVEIRVG-GSSVAEKLAYAKDIL--GKTLSINDVFETGEFI
RL3_METTH VIVHTNPR-LASVPKKKPEVFECGLG-GKTPEEKFEYALEIL--GKDVRASEIFSEGAFV
RL3_METKA VIVATQPK-KAGVPKKKPDVMEYRIG-GKDVRERFEYAVEIL--SEEIRAKDVFDEGEIV
RL3_THEAC IIVATRNKDVPGIPSKKPEIFELRIGGGNSVKERLEYAKNHL--GKQITFTDFSKPGKFV
RL3_THEVO LIVATRNKDVPGIPSKKPEIFELRIGGGNSVKERFEYATAHL--GKTIRFEDFSKPGKFV
RL3_SACS2 LLVSTQPRKIPSLGKKAPDLVEIQIGG-GEKKSQLDYALNIL--GKEITIRDVFKEGQLI
RL3_SULTO VLIATQPKLVPSLGKKKPEIVEVQVGG-GDIKSQLNYVLNIL--GKPLSVKDVFKEGQLI
RL3_AERPE LIAASQPKLAGGLSKKKPDLLEIKVGGVSDVTKLFDYAKDVL--GNLIAVNDVFEEGQLV
RL3_PYRAE ALVATQPH-LSGIGKKTPELLEIPIGGVPSVDERINFAISLL--GKTVSPKDVFTPGQLV
RL3_PYRAB ALVATQPWVIKLK--KKPEVMEYAIG-GTSVEEKFNYIKEKL--GKELRVGEVLKEGELL
RL3_PYRHO ALVSTQPWVIKLK--KKPEVMEYAIG-GTSVEEKFNYIKEKL--GKEIRVGEVLKEGELL
RL3_PYRFU AIVATQPWVIKLK--KKPEVMEYAIG-GTSVEEKFNYIKEKL--GKELRVGEVLKEGELL
RL3_NANEQ IIVSTQPW--KIKLKKTPEIFDIPIG-GSDVNKKLEYALSLL--GKELSINDVFKEGQYV
A9A5J4_NITMS FAIVAISPSAAGLEQKKPYIFEASVS-GGDIPKQFAHVKELL--GKEIKIDQIFETGASV
: * * :.: : : : . .. *
RL3_METAC DTAAITIGKGTQGPVKRWGIQLMKGKHSRQGSLRQVGTLGAFNPSRVSWRVPQMGQMGYH
RL3_METMA DTAAITIGKGTQGPVKRWGIQLQKGKHSRQGSLRQIGTLGSFNPSRVSWRVPQMGQMGYH
RL3_METH6 DVSAITKGKGVQGPVKRWGINLQKRKHSRGGKRRHIGNLGPWNPHHVRWTVPLLGQMGYH
RL3_HALSA DAAGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYH
RL3_HALMA DVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYH
RL3_ARCFU DVIAVTKGKGFQGPVKRWGVITLDAKHARSSKHRRVGNLGPWNPHHVRWTVPQAGQMGFH
RL3_METJA DTIGVTKGKGFQGQVKRWGVKIQFGKHARKGVGRHVGSIGPWQPKMVMWSVPMPGQMGYH
RL3_METVA DTLAVTKGKGFQGPVKRWGVKIQFGKHQRKGVGRQTGSIGPWRPKRVMWTVPLAGQMGFH
RL3_METTH DAIAVTKGKGFQGPVKRWGIRIQYGKAARSSKGRHIGSLGPWTPSRTMWTVPQAGQMGYH
RL3_METKA DVSAITKGKGFQGVVKRWGVTIQDRKTQRKQKGRHIGSIGPITPSRVRWTVPMAGQVGYH
RL3_THEAC DVVSITKGKGFTGHVKRFGVKLLPRKNRK--HRRMIGTLGPWHPDWVRNTVPQAGQMGFQ
RL3_THEVO DVLSVTKGKGFTGHVQRFGVKLLPRKNRK--HRRMIGTLGPWHPDWVRNTVPQAGQMGYQ
RL3_SACS2 DVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGPS-LGTPSYT-PQPGQLGFH
RL3_SULTO DIIGVTKGKGFQGVVKRYGVVELPRWHKHRKGSRKVGARGPS-FSTPSYV-PQPGQMGYH
RL3_AERPE DVIAVTKGKGFQGVIKRWGVKELPRWHKHRKGSRRIGARSHG-RSTFWET-PQAGQTGFH
RL3_PYRAE DVIAVTKGKGYQGVIKRFGVTILPRWHKHRKGHRRTGTIGPQ-APAVMFTQPRPGQMGFH
RL3_PYRAB DVIAVTKGKGTQGPVKRWGIKL--RAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFH
RL3_PYRHO DVIAVTKGKGTQGPVKRWGIKL--RAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFH
RL3_PYRFU DVIAVTKGKGTQGPVKRWGIKL--RAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFH
RL3_NANEQ DVIAVTKGKGFQGVIKRFHVHR--RQHKSEKGVRKVGAIGSRGPGRIFPTVPMPGQMGYH
A9A5J4_NITMS DVAAITKGKGWQGVLKRWNVKK--KQHKSRKTVREVGSLGPISPQSVMYTVPRAGQFGFH
* .:* *** * ::*: : * * . * ** *::
RL3_METAC QRTEFNKRILKIGS------DGE---EVTPEGGFINYGLVRGDYILIKGSVPGPSKRLIR
RL3_METMA QRTEFNKRILKIGS------DGE---EVTPEGGFINYGLVRGDYVLIKGSVPGPSKRLIR
RL3_METH6 QRTEFNKRVLAIGS------DGG---AITPDGGFPGYGIIRGEYAILSGSVPGPSKRLVR
RL3_HALSA QRTELNKRLIDIN-------DGD---EPTPDGGFPNYGEVDGPYTLVKGSVPGPEQRLVR
RL3_HALMA QRTELNKRLIDIG-------EGD---EPTVDGGFVNYGEVDGPYTLVKGSVPGPDKRLVR
RL3_ARCFU QRTEYNKRLIKIGE------NGE---EITPKGGFLHYGVIRTQYVLVTGSVPGPVKRLIR
RL3_METJA QRTEYNKRILKIG------NNGD---EITPKGGFLHYGVIRNNYVVLKGSVQGPAKRLIV
RL3_METVA QRTEYNKRILKLG------SEGA---EITPKGGFLNYGAVKNGYVVVKGTVQGPAKRLVV
RL3_METTH RRTEYNKQILKIGDA----SEAD---LVNPDGGFVRYGLVRNDYVMIKGSVPGPTKRLVV
RL3_METKA QRTEHNKRILKIG------EDGE---EVTPRGGFVNYGVVRGDYIMIHGTVPGPKKRLIR
RL3_THEAC QRTISNVRVIKYGNK----EEVD---SINVRGGFLHYGFVKNDYVLLFGSIPGASKRLIK
RL3_THEVO QRTISNVRVLKYSKG----EDAD---TINVRGGFLHYGLVKNDYVLLFGSVPGPAKRLIK
RL3_SACS2 RRTEYNKRIIKIGD------EPK---EINPAGGFVRYGIVRNTYVLLEGSILGSKKRPIF
RL3_SULTO RRTEYNKRILKISD------DPN---EINPKGGFVNYGIVRNTYLIIEGSIIGAKKRPLF
RL3_AERPE RRTEYNKRILMIDD------DGY---KVTPAGGFLRYGVVRSTFVMLSGSIPGTPKRPIV
RL3_PYRAE QRTEYNKRLLKIGE------NGA---EITPKSGFPHYGVVKGPYILIQGSVPGARKRLVV
RL3_PYRAB HRTELNKRLIAIGENGKLVIDGN-EIEITPKGGFPHYGIVRSDFMMIAGSVPGAIKRIIR
RL3_PYRHO HRTELNKRLIAIGENGKLVIDGN-EIEITPKGGFPHYGIVRGDFMMIAGSVPGAIKRIIR
RL3_PYRFU HRTELNKRLIAIGENGKLKLDENTEIEITPKGGFPHYGIVRSDFMMIAGSVPGAIKRIIR
RL3_NANEQ RRTEYNKLIIKIGE------------PLNVEGGWVRYGQVIGPTILLKGSVPGPRKRLII
A9A5J4_NITMS QRVEYDKRIMIMGNTD----DDK--LKINPDGGFKHFGLVKGDFIVLKGSVPGAYRRLIK
:*. : :: . . .*: :* : :: *:: *. :* :
RL3_METAC LRDPIRA----KKADLGEPNILYISRESKQG--------------------
RL3_METMA LRDPIRA----KKADLGEPNILYISRESKQG--------------------
RL3_METH6 MRSAVRA----KDADLKTPQVLYVSRDSKQGL-------------------
RL3_HALSA FRPAVRP----NESPRLDPEVRYVSTASNQG--------------------
RL3_HALMA FRPAVRP----NDQPRLDPEVRYVSNESNQG--------------------
RL3_ARCFU MRDAIRP----PKAHFDGVNIVYVSTTSKQGR-------------------
RL3_METJA LRRAIRP----QEPLIKVPEITYISTTSKQGK-------------------
RL3_METVA LRGAVRP----AEDKFGLPEVTYISKESKQGN-------------------
RL3_METTH LRKAIRA----AGKQEEAPQINYISTASKQGV-------------------
RL3_METKA VRPAVRPP---KNAPEGAPEILYISRTSQQGVRPKASEDEIVEQLGGPASA
RL3_THEAC MRDPARQ----KVPDIEEVKLEYISLESKQGD-------------------
RL3_THEVO MRDPARQ----KVPDIDNVKLDYISLESKQGD-------------------
RL3_SACS2 LREPVRPS--YVFENP--PKITYVNLLSQQG--------------------
RL3_SULTO LRYPIRPS--WIPQSA--PKITYVNLYSQQG--------------------
RL3_AERPE MRWAIRPPEWYLKLGVRKPEITYISLASKQGV-------------------
RL3_PYRAE LRHPVRPP--RKAPPAAEPQVVWVSSQTL----------------------
RL3_PYRAB VRPAIRPP--KKKPPVQRPQITYVSVESKQ---------------------
RL3_PYRHO VRPAIRPP--KKKPPVQRPQITYVSVESKQ---------------------
RL3_PYRFU VRPAIRPP--KKKPPVQRPQITYVSVESKQ---------------------
RL3_NANEQ LREAIRPP----RKQEKVEGIEYISLSPKN---------------------
A9A5J4_NITMS LRSQIRNV----PDKVNKPNILEVVV-------------------------
.* * : :