CLUSTAL format seed alignment for MF_01402_B
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Features found in the protein:
- The following colors are used to highlight features:
- blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
- magenta is used to display DISULFID, THIOLEST and THIOETH.
- red is used for all other features, such as INIT_MET, ACTIVE SITE,
METAL,BINDING, NP_BIND, SITE, REGION, etc.
- The ID of the sequence used as the template for feature propagation is
underlined.
- A '<' at the beginning of a sequence or '>' at the end indicate that
the protein is fused with another domain either at the N- or C-terminus.
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APGM_THET2 -MDLFPVLKELAQKTPSKILLIVLDGVGGLPLEP-GGPTELEAAKTPNLDRLAEESALGL
APGM_THET8 -MDLFPVLKELAQKTPSKILLIVLDGVGGLPLEP-GGPTELEAAKTPNLDRLAEESALGL
APGM_DEIRA MSDLLDTVRGLAKKTDSKILMVVLDGVGGLPLTV-NGDTELATARTPNLDALAQESQLGQ
APGM_THEMA MFDKQEFVSKLVTEEKAKIVLLVMDGLGDIPV---NGKTPLQAANTPNLDNLAKESDLGQ
APGM_AQUAE ----MDVISELVKKNGSKILLIVLDGLGGLPVK--EGKTELELAKTPNLDKLVKNSATGL
APGM_GEOSL ----------------MKYIVLLGDGMSDEPMQELGGKTPLQAARTPHMDAMARRGRIGL
* :::: **:.. *: * * * *.**::* :.... *
APGM_THET2 LTPVYPGLAPGSGPGHLALFGYDPFRYVVGRGALSALGLGADFREGDVALRGNFATLDP-
APGM_THET8 LTPVYPGLAPGSGPGHLALFGYDPFRYVVGRGALSALGLGADFREGDVALRGNFATLDP-
APGM_DEIRA LELVGAGITPGSGPGHLSLFGYDPLKYVVGRGALSAVGIGVKLNRGDVAVRGNFATLGA-
APGM_THEMA TIPVLPGITPGSGPGHLSLFGYDPIKYQIGRGILEALGIGVEVGEKDVVARANFATWD--
APGM_AQUAE HIPVDWGITPGSGPGHLGLFGYDPIKYQIGRGILEALGLGIDVKDTDIAVRGNYATVEYR
APGM_GEOSL ARTVPEGYPPGSDVANLSVFGYDPRACYTGRSPLEAASMGVELGSADVAFRVNLVNLAPT
* * .***. .:*.:***** **. *.* .:* .. *:. * * ..
APGM_THET2 --EGKVVDRRAGRPPTEENQRVVAKLKEAIPRIEDVEVHFYTESEHRFLVVLRG-EG---
APGM_THET8 --EGKVVDRRAGRPPTEENQRVIAKLKEAIPRIEDVEVLFYTESEHRFLVILRG-EG---
APGM_DEIRA --GRLILDRRAGRPSDEKNAEIVAKLRAAIPEIDGVAVEVYTESEHRFVVVFRAPEGQ-P
APGM_THEMA --GKVVLDRRAGRPATEESAKVVQLLSEKIKKIEDVEITFYPGKEHRFVVKFTG-EG---
APGM_AQUAE NGKPIVVDRRAGRIPTEENKRITAKLQEAIKEIDGVQVIIKPGMEHRLAIVFRFPEKLSP
APGM_GEOSL RGTLVMNDYSAGHISTAEGRELIEAIQGV---MGTDEFQFYPGVGYRHLMVWRNGKCGMT
: * **: . :. .: : : . . . :* : :
APGM_THET2 LGDAVTDTDPQKTGLPPLK--AKALDEASERTARLVNLLSERIREVLKDEPRMNGALFRG
APGM_THET8 LEDKVTDTDPQKTGLPPLK--AKALDEASERTARLVNLLSERIREVLKDEPRMNGALFRG
APGM_DEIRA LGANISDVDPQVTGVEPKT--AIANDPSSEVTAGLINTFVARAEVALADEPQVNGVLFRG
APGM_THEMA LGDKVTDADPQKEGHPMVW--AEGLDEPSKKTARIVNELIKKIAEVLKDNPKINFALIRG
APGM_AQUAE GSDAINDTDPQQVGKEPLE--PKGENPNAEKVAEVVRKFIQRATEILRNEPKANYILLRG
APGM_GEOSL VVPPHDISGQSILEHLPKGEGAERLIELMNSSQLVLNNHPQYRRRLEEGKVPANSIWLWG
. . . : ::. .: * : *
APGM_THET2 ASKKPSFPRMQEVYKLTPAAIASYPMYKGLASLVGMEVLPVEGE----GDALEGKLKALK
APGM_THET8 ASKKPSFPRMQEVYKLTPAAIASYPMYKGLASLVGMEVLPVEGE----GDALEGKLKALK
APGM_DEIRA YSDVPHFPSFEDAYQLKAACIASYPMYKGLASLVGMDVLPVEGH----EDALEGKVKALR
APGM_THEMA FSKYPDLPKFPQVYKMKAGAIATYPMYRGLAKLVGMEIIET-------GQTVADEIKTLK
APGM_AQUAE FSQKPDIPTMEERFGVKPCCIAVYPMYKGLASLVGMDVIEFE------GSTIQDEIDTLK
APGM_GEOSL HGKAPRMASFHEKFGLTGAVISAVDLVRGIGVCAGLDVIKVEGATGYIDTNYEGKVTAAL
.. * :. : : : :. *: : :*:. .*:::: .:: :
APGM_THET2 ENWGRYDFFYFHVKKTDAMGEDGNFHGKVEKVELFDA-----LLPEILALGPDVLAITGD
APGM_THET8 ENWGRYDFFYFHVKKTDAMGEDGNFHGKVEKVELFDA-----LLPEILALGPDVLAITGD
APGM_DEIRA ENWAKYDFFYFHIKKTDSTGEDGDFAEKVHKIELFDE-----LLPQLLELQPDVIAVVGD
APGM_THEMA EKWNDYDFFYVHVKKTDSYGEDGKFEEKVKVIEEVDA-----IIPEIVSLNPDVLVITGD
APGM_AQUAE KVWNEYDYFFVHIKKTDSYGEDGNYEGKVSVIEDFDA-----HLPQFLELKPDVLAITGD
APGM_GEOSL EALEAHDYVYLHVEAPDEAGHGGNLEHKLKAIEDFDARVVGPIMAGMEKFGSYRILCTPD
: :*:.:.*:: .* *..*. *: :* .* :. : : . : . *
APGM_THET2 HSTPALLKAHSWHPVPLLLKAPYLRADE-ARRFTEREAQRGSLGHLRGMELMPLLLAHAG
APGM_THET8 HSTPALLKAHSWHPVPLLLKAPYLRADE-ARRFTEREAQRGSLGHLRGVELMPLLLAHAG
APGM_DEIRA HSTPSKLKSHSWHPVPLLIRSNYGRRDP-AQRYTEEEAARGTLGLRHGPDLMPLLMANAL
APGM_THEMA HSTPVPLKAHSWHPVPLLIWSKYTRRGL-SQAFNEFECARGTLGTIHASDVMTLALAYAG
APGM_AQUAE HSTPSILKGHSWHPVPLLIHSPYVLGGT-SERFTERECLKGELGIIPAVKITQLLLANAL
APGM_GEOSL HPTPLRLKTHTDAPVPFVLFSGETSENAGVAGYDEESARSAGLVVEDGFRLMEMMLDR--
*.** ** *: ***::: : . : * .. . * . : : :
APGM_THET2 KLLKYGA
APGM_THET8 KLLKYGA
APGM_DEIRA KLNKYGA
APGM_THEMA KLEKFGA
APGM_AQUAE RLKKYGA
APGM_GEOSL -------