CLUSTAL format seed alignment for MF_01433
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Features found in the protein:- The following colors are used to highlight features:
- blue indicates DNA_BIND, DOMAIN, PROPEP, REPEAT, SIGNAL, TRANSMEM
and ZN_FING.
- green indicates INTRAMEM, MOTIF, PEPTIDE, TOPOD_DOM and TRANSIT.
- magenta is used to display DISULFID
- red indicates ACT_SITE, BINDING, CARBOHYD, CROSS_LNK, LIPID,
MOD_RES, NON_STD and SITE.
- The ID of the sequence used as the template for feature propagation is
underlined.
- An 'X' at the beginning or at the end of a sequence indicates that
the protein is fused with another domain respectively at its N- or
C-terminus.
Sequences that are concerned have a '_P' (for partial) suffix added
to their ID.
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RIHB_ECOL6 MEKRKIILDCDPGHDDAIAIMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKLEIN
RIHB_ECO57 MEKRKIILDCDPGHDDAIAIMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKLEIN
RIHB_SHISS MEKRKIILDCDPGHDDAIAIMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKLEIN
RIHB_ECOLI MEKRKIILDCDPGHDDAIAIMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKLEIN
RIHB_SHIFL MEKRKIILDCEPGHDDAIAMMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKLEIN
**********:********:****************************************
RIHB_ECOL6 VPVYAGMPQPIMRQQIVADNIHGETGLDGPVFEPLTRQAENTHAVKYIIDTLMASDGDIT
RIHB_ECO57 VPVYAGMPQPIMRQQIVADNIHGDTGLDGPVFEPLTRQAESTHAVKYIIDTLMASDGDIT
RIHB_SHISS VPVYAGMPQPIMRQQIVADNIHGETGLDGPVFEPLTRQAESTHAVKYIIDTLMASDGDIT
RIHB_ECOLI VPVYAGMPQPIMRQQIVADNIHGETGLDGPVFEPLTRQAESTHAVKYIIDTLMASDGDIT
RIHB_SHIFL VPVYAGMPQPIMRKQIVADNIHGETGLDGPVFEPLTRQAESTHAVKYIIDTLMASDGDIT
*************:*********:****************.*******************
RIHB_ECOL6 LVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFTPSAEFNIFADPEAARVVFTS
RIHB_ECO57 LVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFTPSAEFNIFADPEAARVVFTS
RIHB_SHISS LVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFTPSAEFNIFADPEAARVVFTS
RIHB_ECOLI LVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFTPSAEFNIFADPEAARVVFTS
RIHB_SHIFL LVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFTPSAEFNIFADPEAARVVFTS
************************************************************
RIHB_ECOL6 GVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGPVHD
RIHB_ECO57 GVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGPVHD
RIHB_SHISS GVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGEMFSDIMNFTLKTQFENYGLAGGPVHD
RIHB_ECOLI GVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGPVHD
RIHB_SHIFL GVPLVMMGLDLTNQTVCTPDVIARMERVGGPAGELFSDIMNFTLKTQFEYYGLAGGPVHD
***************************.******:************** **********
RIHB_ECOL6 ATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFWG
RIHB_ECO57 ATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDSDWFWG
RIHB_SHISS ATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFWG
RIHB_ECOLI ATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFWG
RIHB_SHIFL ATCIGYLINPDGIKTQDMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFWG
****************:*************************************:*****
RIHB_ECOL6 LVEECVRGYIKTH
RIHB_ECO57 LVEECVRGYIKTH
RIHB_SHISS LVEECVRGYIKTH
RIHB_ECOLI LVEECVRGYIKTH
RIHB_SHIFL LVEECVRGYIKTH
*************