CLUSTAL format seed alignment for MF_01608

_____________________________________________________________________________

Features found in the protein:
The following colors are used to highlight features:
blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
magenta is used to display DISULFID, THIOLEST and THIOETH.
red is used for all other features, such as INIT_MET, ACTIVE SITE,
 METAL,BINDING, NP_BIND, SITE, REGION, etc.
The ID of the sequence used as the template for feature propagation is 
underlined.
A '<' at the beginning of a sequence or '>' at the end indicate that
 the protein is fused with another domain either at the N- or C-terminus.
_____________________________________________________________________________

CDR_STAEQ             -MNKIIIVGAVAGGATCASQIRRLDKESEIIVFEKDRDMSFANCALPYYIGNVIEDRRKV
CDR_STAES             -MNKIIIVGAVAGGATCASQIRRLDKESEIIVFEKDRDMSFANCALPYYIGNVIEDRRKV
CDR_STAA8             -MPKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYA
CDR_STAA3             -MPKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYA
CDR_STAAC             -MPKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYA
CDR_STAAS             -MPKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRKYA
CDR_STAAW             -MPKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRKYA
CDR_STAAN             -MPKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRKYA
CDR_STAAB             -MPKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRKYA
CDR_STAHJ             -MRKIIVVGAVAGGATCASQIRRLDKDSEITIFEKDRDMSFANCGLPYFIGNIVNERKDV
CDR_STAS1             -MNKIVVVGAVAGGATVASQIRRLDQESEIVVFEKDRDMSFANCALPYYLGNVVDSRNKV
A0A166SKI5_STAPS      MKKHIIVVGAVAGGATSASQIRRLDKDSRITVYEKDSFMSFANCGLPYYLGNVIEERDDI
A0A033UZY5_STAAU      -MAKIIVIGAVAGGATVASQIRRLDPDSDITVYEKDRDMSFANCGLPYYLGEVVEDRDMM
B9DIS5_STACT          -MTKIIIIGGVAGGATFASQLRRLDPDCDITIFEKDRDVTFANCGLPYYLGNIIDDRSEL
                         :*:::*.****** ***:**** :. * ::***  ::****.*** :*::::.*   

CDR_STAEQ             LAYTPNQFYDKKQITVKTYHEVIQINDERQTVTVLNHQTNQTFEESYDTLILSPGASANR
CDR_STAES             LAYTPNQFYDKKQITVKTYHEVIQINDERQTVTVLNHQTNQTFEESYDTLILSPGASANR
CDR_STAA8             LAYTPEKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANS
CDR_STAA3             LAYTPEKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANS
CDR_STAAC             LAYTPEEFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANS
CDR_STAAS             LAYTPEKFYDRKQITVKTYHEVIAINDERQTVTVLNRKTNEQFEESYDKLILSPGASANS
CDR_STAAW             LAYTPEKFYDRKQITVKTYHEVIAINDERQTVTVLNRKTNEQFEESYDKLILSPGASANS
CDR_STAAN             LAYTPEKFYDRKQITVKTYHEVIAINDERQTVTVLNRKTNEQFEESYDKLILSPGASANS
CDR_STAAB             LAYTPEKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANS
CDR_STAHJ             LPITPDVFKEKKDITVKTYHEVIAINDKDQTVTVVNRQTNEKFEASYDKLILSPGAGANS
CDR_STAS1             LEATPESFYEAKNIVVKPCHKVTSINDTENTITVYDRIQDTYFETHYDTLILSPGCSANS
A0A166SKI5_STAPS      LSTNPEKFKAYKDIDVKVKHEVLKIDDKKQTVTVKNHFTGETFEDAYDALVLSPGARASQ
A0A033UZY5_STAAU      LSATPEQFKDKKHITVKTYHEAIELNDAKKTITIKNHETGEVFEDAYDKLILSPGCRARH
B9DIS5_STACT          LHFTPEQFKENKGVTAKVFHEVIQVDPNNQTVTVKNLKTDEVFTEDYDYLVMSPGCRANQ
                      *  .*: *   * : .*  *:.  ::   :*::: :   .  *   ** *::***. *  

CDR_STAEQ             LNTHSDISFTVRNLEDTETIDTFITNTKAQRALVVGAGYISLEVLENLHHRGLDVTWIHR
CDR_STAES             LNTHSDISFTVRNLEDTETIDTFITNTKAQRALVVGAGYISLEVLENLHHRGLDVTWIHR
CDR_STAA8             LGFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLNERGLHPTLIHR
CDR_STAA3             LGFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHR
CDR_STAAC             LGFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHR
CDR_STAAS             LGFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHR
CDR_STAAW             LGFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHR
CDR_STAAN             LGFESDITFTLRNLEDTDAIDQFIKANQVDKVLVIGAGYVSLEVLENLYERGLHPTLIHR
CDR_STAAB             LGFESDITFTLRNLEDTDAIEQFIKANQVDKVLVVGAGYVSLEVLENLYKRGLHPTLIHR
CDR_STAHJ             LGFDSDYIFTLRNMEDTDAIDQFIDQHQAKKALVVGAGYISLEVLENLYARGLDVTLIHR
CDR_STAS1             LNLDSPIAFTLRNMEDTDAIETFIKENQVKNALVVGTGYIGLEILDNLYERGISPTLIHR
A0A166SKI5_STAPS      LNFDVPHLFTLRNMDDTDQIDTYIRQYNVKTVLIVGAGYVSLEMVENMHHRGLHPTLIHR
A0A033UZY5_STAAU      LGFQSDRVFTLRNLVDTDKIEDFIQKENVQSALIVGAGYVSLEILENLYNRNIQTTLIHR
B9DIS5_STACT          LPLNSDMAFTLRNLEDTDDIESYISNNNVKKAPIIGAGYISLEVLENLYNRGIQTTLIHR
                      *  .    **:**: **: *: :*   :.. . ::*:**:.**:::*:  *.:  * ***

CDR_STAEQ             STNINKLMDQDMNQPIIDEIEKRNITYRFNEEISHVNGHEVTFTSGKVENFDLIIEGVGT
CDR_STAES             STNINKLMDQDMNQPIIDEIEKRNITYRFNEEISHVNGHEVTFTSGKVENFDLIIEGVGT
CDR_STAA8             SDKINKLMDADMNQPILDELDKREIPYRLNEEINAINGNEITFKSGKVEHYDMIIEGVGT
CDR_STAA3             SDKINKLMDADMNQPILDELDKREIPYRLNEEINAINGNEITFKSGKVEHYDMIIEGVGT
CDR_STAAC             SDKINKLMDADMNQPILDELDKREIPYRLNEEINAINGNEITFKSGKVEHYDMIIEGVGT
CDR_STAAS             SDKINKLMDADMNQPILDELDKREIPYRLNEEIDAINGNEITFKSGKVEHYDMIIEGVGT
CDR_STAAW             SDKINKLMDADMNQPILDELDKREIPYRLNEEIDAINGNEITFKSGKVEHYDMIIEGVGT
CDR_STAAN             SDKINKLMDADMNQPILDELDKREIPYRLNEEIDAINGNEITFKSGKVEHYDMIIEGVGT
CDR_STAAB             SDKINKLMDADMNQPILDELDKREIPYRLNEEIVAINGNEITFKSGRVEHYDMIIEGVGT
CDR_STAHJ             SEKVNKLMDQDMNQVIFDELDSRHIPYRLNEEIVSVKDHLVTFKSGIQEDFDIIIEGVGT
CDR_STAS1             STHINKLMDQDMNQAILDEMDKRDIHYRFNEEISKVVGNAVHFESGKVENYDLIIEGVGV
A0A166SKI5_STAPS      SEAVNKLMDQDMNSVIFDALNQYNIPYRLNEEIKSIDGHTVTFTSGAVEDYDLIIAGVGV
A0A033UZY5_STAAU      SDHINKSMDKDLNKVIFDELEKRHIPYRLNEEIVDISGREVTFKSGKTESYDIVITGVGI
B9DIS5_STACT          SEQINKLMDQDMNKVIFDEMDKRQIDYRLNEEVDSVDGHTVHFKSGNTEDFDIIIEGIGI
                      *  :** ** *:*. *:* ::. .* **:***:  : .. : * **  * :*::* *:* 

CDR_STAEQ             HPNSQFIKSSNVILNDKGYIPVNHNFQTNIPNIYALGDVITSHYRHVNLPAQVPLAWGAH
CDR_STAES             HPNSQFIKSSNVILNDKGYIPVNHNFQTNIPNIYALGDVITSHYRHVNLPAQVPLAWGAH
CDR_STAA8             HPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAH
CDR_STAA3             HPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAH
CDR_STAAC             HPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAH
CDR_STAAS             HPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAH
CDR_STAAW             HPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAH
CDR_STAAN             HPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAH
CDR_STAAB             HPNSKFIESSNIKLDRKGFIPVNDKLETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAH
CDR_STAHJ             HPHSKFIESSNVALDDKGFVKVNDKFETNIPNIYALGDVITSTYRHVNLPAQVPLAWGAH
CDR_STAS1             KPNSEFIKNSNVTLDDKGYIPVNDQFQTNIPNIYALGDIITSHYRHVDLNAHVPLAWGAH
A0A166SKI5_STAPS      RPNSEFIQNSGIQLDAKGYIPVNDKFETNIPNIYAVGDIVTSFYRHVDLPAHVPLAWGAH
A0A033UZY5_STAAU      EPNSDWLKSSSLKLNEKGYIPVNEYFETNLDDVYALGDVIETFYRHTKKPTSVTLAWGAH
B9DIS5_STACT          KPNTEFLEGAGIEEDDAGYIPVNEYFQTNYRNVYAIGDIVSNYYRHVNIPTHVPLAWGAH
                      .*::.:::.:.:  :  *:: **. ::**  ::**:**:  . ***..  : *.******

CDR_STAEQ             RGASIIAEQLSGNSSIH---FKGYLGNNIVKFFDYTLASVGIKPNELKNFDYDMVEVKQG
CDR_STAES             RGASIIAEQLSGNSSIH---FKGYLGNNIVKFFDYTLASVGIKPNELKNFDYDMVEVKQG
CDR_STAA8             RAASIVAEQIAGNDTIE---FKGFLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQG
CDR_STAA3             RAASIVAEQIAGNDTIE---FKGFLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQG
CDR_STAAC             RAASIVAEQIAGNDTIE---FKGFLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQG
CDR_STAAS             RAASIVAEQIAGNDTIE---FKGFLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQG
CDR_STAAW             RAASIVAEQIAGNDTIE---FKGFLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQG
CDR_STAAN             RAASIVAEQIAGNDTIE---FKGFLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQG
CDR_STAAB             RAASIVAEQIAGNDTIE---FKGFLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQG
CDR_STAHJ             RGASVIAEQLAGNKNII---FKGFLGTNIVKFFDYTLASVGIKVEELTHFDYQMVELNSG
CDR_STAS1             RGASVIAEQLAGDHKIH---FKGYLGSNIVKFFDYTFASVGVSPKELSNFDYAMVEANQG
A0A166SKI5_STAPS      RGASIIAEQIAGHPEVT---FKGYVGANIVKFFDYTLASTGISPQELKNFDYQMVEVNLY
A0A033UZY5_STAAU      RAAALIAENITSNSSSPKATFKGLLGTNIVKMFDYALGSVGVSESELSNYDYEVVEQTQK
B9DIS5_STACT          RGASIVAEHITQTRNVP---FKGFLASNAVKFFDYTLTSVGVSPSDLKHFDYTMVETEQM
                      *.*:::**:::         *** :. * **:***:: *.*:. .:*.::** :**    

CDR_STAEQ             AHAGYYPGNSPLHLRVYFEKDSRKLIRAAAVGKQGADKRIDVLSMAMMNNATVDDLTEFE
CDR_STAES             AHAGYYPGNSPLHLRVYFEKDSRKLIRAAAVGKQGADKRIDVLSMAMMNNATVDDLTEFE
CDR_STAA8             AHANYYPGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFE
CDR_STAA3             AHANYYPGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFE
CDR_STAAC             AHANYYPGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFE
CDR_STAAS             AHANYYPGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFE
CDR_STAAW             AHANYYPGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFE
CDR_STAAN             AHANYYPGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFE
CDR_STAAB             AHANYYPGNSPLHLRVYYDTSNRQILRAAAVGKEGVDKRIDVLSMAMMNQLTVDELTEFE
CDR_STAHJ             THAGYYPGNTNVHLRVYFDTNNRHLLRAAAVGKTGVDKRIDVLSMAMMSELTIDELTEFE
CDR_STAS1             EHAGYYPGNTKLHLRVYFDKTNRRIIRAAAVGMKGVDKRIDVLSMAMMHKLTIDELVEFE
A0A166SKI5_STAPS      THAGYYPGNSKVHLRAYFDKETRRILRAAAVGQKDVDKRIDVLTMALMHQATIDELTEFE
A0A033UZY5_STAAU      QHAGYYPSAEPLTLRVYFDKATRKILRACAVGKDGADKRIDILATAIIGDLTVDELRDIE
B9DIS5_STACT          NHAGYYPGAEPLHLRVYFENKSRKILRAAAAGKSGADKRIDILSMAMQNDMTVDELTEFE
                       **.***.   : **.*::. .*:::**.*.*  ..*****:*: *:  . *:*:* ::*

CDR_STAEQ             VAYAPPYSHPKDLINLIGYKAQ--
CDR_STAES             VAYAPPYSHPKDLINLIGYKAQ--
CDR_STAA8             VAYAPPYSHPKDLINMIGYKAK--
CDR_STAA3             VAYAPPYSHPKDLINMIGYKAK--
CDR_STAAC             VAYAPPYSHPKDLINMIGYKAK--
CDR_STAAS             VAYAPPYSHPKDLINMIGYKAK--
CDR_STAAW             VAYAPPYSHPKDLINMIGYKAK--
CDR_STAAN             VAYAPPYSHPKDLINMIGYKAK--
CDR_STAAB             VAYAPPYSHPKDLINMIGYKAK--
CDR_STAHJ             VAYAPPYSHPKDLVNMIGYKARDL
CDR_STAS1             VAYAPPYSRPKDIINMIGYKARNK
A0A166SKI5_STAPS      VAYAPPFAHPKDLINMLGYKARNL
A0A033UZY5_STAAU      IAYAPPFSSPKDIVNMIGYKAQSK
B9DIS5_STACT          SAYAPPFSSPKDIINMIGYKAQNK
                       *****:: ***::*::****: