CLUSTAL format seed alignment for MF_01649
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Features found in the protein:
- The following colors are used to highlight features:
- blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
- magenta is used to display DISULFID, THIOLEST and THIOETH.
- red is used for all other features, such as INIT_MET, ACTIVE SITE,
METAL,BINDING, NP_BIND, SITE, REGION, etc.
- The ID of the sequence used as the template for feature propagation is
underlined.
- A '<' at the beginning of a sequence or '>' at the end indicate that
the protein is fused with another domain either at the N- or C-terminus.
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HCAF_ECOLI -------MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTR
HCAF_ECO24 -------MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTR
HCAF_ECOHS -------MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTR
HCAF_SHIFL -------MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTR
HCAF_SHIF8 -------MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTR
HCAF_SHIBS -------MSAQVSLELHLRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTR
HCAF_ECO57 -------MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEICYTMRTTVNAQTR
HCAF_SHISS -------MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLEQLDKEIRYTMRTTVNAQTR
HCAF_PHOLL MKELIVNQEKRVSPELHYEISQFLYYEIALLDEWRFRDWLELLSEDLSYTMRTIVNAQTR
. :** *** .*****::* :***:*:***** *.::: ***** ******
HCAF_ECOLI DRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQISETDIPNVF
HCAF_ECO24 DRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQISETDIPNVF
HCAF_ECOHS DRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQVSETDIPNVF
HCAF_SHIFL DRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQVSETDIPNVF
HCAF_SHIF8 DRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQVSETDIPNVF
HCAF_SHIBS DRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQISETDIPNVF
HCAF_ECO57 DRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQISETDIPNVF
HCAF_SHISS DRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQISETDIPNVF
HCAF_PHOLL DRRKSIQPPTTWLFNDNKFQLERRIARLETGMAWAEEPPSRTRHLLTNLVITETDLPDQF
****.:******:***.* **************************::* ::***:*: *
HCAF_ECOLI AVRVNYLLYRAQKERDETFYVGTRFDKVRRLE-DDNWRLLERDIVLDQAVITSHNLSVLF
HCAF_ECO24 AVRVNYLLYRAQKERDETFYVGTRFDKVRRLE-DDNWRLLERDIVLDQAVITSHNLSVLF
HCAF_ECOHS AVRVNYLLYRAQKERDETFYVGTRFDKVRRLE-DDNWRLLERDIVLDQAVITSHNLSVLF
HCAF_SHIFL AVRVNYLLYRAQKERDETFYVGTRFDKVRRLE-DDNWRLLERDIVLDQAVITSHNLSVLF
HCAF_SHIF8 AVRVNYLLYRAQKERDETFYVGTRFDKVRRLE-YDNWRLLERDIVLDQAVITSHNLSVLF
HCAF_SHIBS AVRVNYLLYQAQKERDETFYVGTRFDKVRRLE-DDNWRLLERDIVLDQAVITSHNLSVLF
HCAF_ECO57 AVRVNYLLYRAQKERDETFYVGTRFDKVRRLE-DDNWRLLERDIVLDQAVITSHNLSVLF
HCAF_SHISS AVRVNYLLYRAQKERDETFYVGTRFDKVRRLE-DDNWRLLERDIVLDQAVITSHNLSVLF
HCAF_PHOLL HVQSNYLLYRSQKERDEVFYVGKRLDCVRRNPKTDSWLICKREITLDQAVLTFHNLSVLF
*: *****::******.****.*:* *** *.* : :*:*.*****:* *******