CLUSTAL format seed alignment for MF_04002
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Features found in the protein:- The following colors are used to highlight features:
- blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
- magenta is used to display DISULFID, THIOLEST and THIOETH.
- red is used for all other features, such as INIT_MET, ACTIVE SITE,
METAL,BINDING, NP_BIND, SITE, REGION, etc.
- The ID of the sequence used as the template for feature propagation is
underlined.
- A '<' at the beginning of a sequence or '>' at the end indicate that
the protein is fused with another domain either at the N- or C-terminus.
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VL1_BPV5 ------------------------------------------------------------
VL1_BPV1 ------------------------------------------------------------
VL1_BPV2 ------------------------------------------------------------
VL1_PAPVD ------------------------------------------------------------
VL1_PAPVE ------------------------------------------------------------
VL1_HPV43 -----------------------------------MALIFICILHCGIWANAVNAFHIFL
VL1_HPV40 ------------------------------------------------------------
VL1_HPV07 ------------------------------------------------------------
VL1_HPV11 ------------------------------------------------------------
VL1_HPV6A ------------------------------------------------------------
VL1_HPV6B ------------------------------------------------------------
VL1_HPV44 ------------------------------------------------------------
VL1_HPV55 ------------------------------------------------------------
VL1_HPV13 ------------------------------------------------------------
VL1_PCPV1 ------------------------------------------------------------
VL1_HPV34 -----------------------------------MGPILYCILACMSFHANVNVCHIF-
VL1_HPV32 ------------------------------------------------------------
VL1_HPV42 ------------------------------------------------------------
VL1_HPV54 ------------------------------------------------------------
VL1_RHPV1 ------------------------------------------------------------
VL1_HPV52 -----------------------------------MVQILFYILVIFYYVAGVNVFHIFL
VL1_HPV67 --------------------------------MYLFMVVILFYTLVIFYVAGVNGFHIFL
VL1_HPV33 ------------------------------------------------------------
VL1_HPV58 -----------------------------------MVLILCCTLAILFCVADVNVFHIFL
VL1_HPV35 ------------------------------------------------------------
VL1_HPV31 ------------------------------------------------------------
VL1_HPV16 ------------------------------------------------------------
VL1_HPV70 ------------------------------------------------------------
VL1_HPV39 ------------------------------------------------------------
VL1_HPV68 ------------------------------------------------------------
VL1_HPVME ------------------------------------------------------------
VL1_HPV18 MCLYTRVLILHYHLLPLYGPLYHPRPLPLHSILVYMVHIIICGHYIILFLRNVNVFPIFL
VL1_HPV45 -----------------------------------MAHNIIYGHGIIIFLKNVNVFPIFL
VL1_HPV51 ------------------------------------------------------------
VL1_HPV82 ------------------------------------------------------------
VL1_HPV26 ------------------------------------------------------------
VL1_HPV69 ------------------------------------------------------------
VL1_HPV2A ---------------------------------------------MSCGLNDVNVSTISL
VL1_HPV57 ---------------------------------------------MFCGLNDVNVCTISL
VL1_HPV61 ------------------------------------------------------------
VL1_HPV62 ------------------------------------------------------------
VL1_HPV29 ------------------------------------------------------------
VL1_HPV10 ---------------------------------MAGISIFGLLPFTSPDIVAVNVSHIFL
VL1_HPV28 ------------------------------------------------------------
VL1_HPV03 ---------------------------------MAGIFIYGLSPSFCPDVVAVNVSHIFL
VL1_HPV56 --------------------------MMLPMMYIYRDPPLHYGLCIFLDVGAVNVFPIFL
VL1_HPV66 ------------------------------------------------------------
VL1_HPV30 ------------------------------------------------------MFPIFL
VL1_HPV53 ------------------------------------------------------------
VL1_BPV3 ------------------------------------------------------------
VL1_BPV4 ------------------------------------------------------------
VL1_HPV24 ------------------------------------------------------------
VL1_HPV19 --------------------------------MTPVVIFTYIPAFASDSNENVNIYNFLL
VL1_HPV25 ------------------------------------------------------------
VL1_HPV21 ------------------------------------------------------------
VL1_HPV14 ------------------------------------------------------------
VL1_HPV20 ------------------------------------------------------------
VL1_HPV47 ------------------------------------------------------------
VL1_HPV36 ------------------------------------------------------------
VL1_HPV05 ------------------------------------------------------------
VL1_HPV5B ------------------------------------------------------------
VL1_HPV12 ------------------------------------------------------------
VL1_HPV08 ------------------------------------------------------------
VL1_HPV49 ------------------------------------------------------------
VL1_HPV09 ------------------------------------------------------------
VL1_HPV15 ------------------------------------------------------------
VL1_HPV17 ------------------------------------------------------------
VL1_HPV37 ------------------------------------------------------------
VL1_HPV38 ------------------------------------------------------------
VL1_HPV22 ------------------------------------------------------------
VL1_HPV23 ------------------------------------------------------------
VL1_HPV48 ------------------------------------------------------------
VL1_HPV50 ------------------------------------------------------------
VL1_HPV60 ------------------------------------------------------------
VL1_HPV04 ------------------------------------------------------------
VL1_HPV65 ------------------------------------------------------------
VL1_HPV41 ----------------------------------------MIYILACCAGNVKNANVFIF
VL1_CRPVK ------------------------------------------------------------
VL1_COPV6 ------------------------------------------------------------
VL1_HPV1 -------------------------------------------------------MYNVF
VL1_HPV63 ------------------------------------------------------------
VL1_BPV5 -MAVWQQQGQRLYFPPN-PVTKVL-CTESYVKRTSIFYHGETERLLTVGHPYWKIPEQN-
VL1_BPV1 -MALWQQGQ-KLYLPPT-PVSKVL-CSETYVQRKSIFYHAETERLLTIGHPYYPVSIGA-
VL1_BPV2 -MALWQQGQ-KLYLPPT-PVSKVL-CSETYVQRKSIFYHAETERLLTVGHPYYQVTVGD-
VL1_PAPVD -MAFWQPGQAL-YLPPT-PVTKVL-CSEQYINVRDIFYHGETERMLTSG-SILSLEVTQ-
VL1_PAPVE -MAFWQPSQ-RLYLPPT-PVTKVL-CSEQYIRRKDVFYHGETERMLTVGHPYYEIKQSG-
VL1_HPV43 QITMWRLNDNKVYLPPPGPIASIV-STDEYVQRTNLFYYAGSSRLLAVGHPYFPLKNSS-
VL1_HPV40 ---MWQLNENQVYLPPPTPVATIV-STDEYVQRTSLYYHAGSARLLTIGHPYFELKKPN-
VL1_HPV07 ---MWQLNENQVYLPPPTPVATIV-STDEYVQRTSLYYHAGSTRLLTIGHPYFELKKPN-
VL1_HPV11 ---MWRPSDSTVYVPPPNPVSKVV-ATDAYVKRTNIFYHASSSRLLAVGHPYYSIKKVN-
VL1_HPV6A ---MWRPSDSTVYVPPPNPVSKVV-ATDAYVTRTNIFYHASSSRLLAVGHPYFSIKRAN-
VL1_HPV6B ---MWRPSDSTVYVPPPNPVSKVV-ATDAYVTRTNIFYHASSSRLLAVGHPYFSIKRAN-
VL1_HPV44 ---MWRPSENQVYVPPPAPVSKVI-PTDAYVKRTNIYYHASSSRLLAVGNPYFAIRPAN-
VL1_HPV55 ---MWRPSENQVYVPPPAPVSKVI-TTDAYVKRTNIVYHASSSRLLAVGNPYFAIRPAN-
VL1_HPV13 ---MWRPSDNKLYVPPPAPVSKVI-TTDAYVTRTNIFYHASSSRLLAVGNPYFPIKKQN-
VL1_PCPV1 ---MWRPSDNKLYVPPPAPVSKVI-TTDAYVTRTKIFYHASSSRLLAVGNPYFPIRKGN-
VL1_HPV34 -LQMWRPTEAKVYLPPV-SVSKVV-STEEYVTRTNIYYYAGSTRLLAVGHPYYPIKDTN-
VL1_HPV32 -MSVWRPSDNKVYLPPP-PVSKVV-STDEYVQRTNYFYHASSSRLLAVGHPYYTIKKTP-
VL1_HPV42 -MSVWRPSDNKVYLPPP-PVSKVV-STDEYVQRTNYFYHASSSRLLVVGHPYYSITKRP-
VL1_HPV54 ---MWRPSENKVYLPPT-PVSKVV-STDEYVTRTSIYYHASSSRLLAVGHPYFKVQKTN-
VL1_RHPV1 -MSMWRPSDSKVYLPPV-PVSKVV-STDEYVSRTSIYYHAGSSRLLAVGHPYYAVKKGN-
VL1_HPV52 QMSVWRPSEATVYLPPV-PVSKVV-STDEYVSRTSIYYYAGSSRLLTVGHPYFSIKNTSS
VL1_HPV67 QMSVWRPSEATVYLPPV-PVSKVV-STDEYVSRTSIYYYAGSSRLLAVGHPYFSIPNPS-
VL1_HPV33 -MSVWRPSEATVYLPPV-PVSKVV-STDEYVSRTSIYYYAGSSRLLAVGHPYFSIKNPT-
VL1_HPV58 QMSVWRPSEATVYLPPV-PVSKVV-STDEYVSRTSIYYYAGSSRLLAVGNPYFSIKSPN-
VL1_HPV35 -MSLWRSNEATVYLPPV-SVSKVV-STDEYVTRTNIYYHAGSSRLLAVGHPYYAIKKQD-
VL1_HPV31 -MSLWRPSEATVYLPPV-PVSKVV-STDEYVTRTNIYYHAGSARLLTVGHPYYSIPKSD-
VL1_HPV16 -MSLWLPSEATVYLPPV-PVSKVV-STDEYVARTNIYYHAGTSRLLAVGHPYFPIKKPN-
VL1_HPV70 -MALWRSSDNTVYLPPP-SVAKVV-NTDDYVTRTGIYYYAGSSRLLTVGHPYFKVPVNG-
VL1_HPV39 -MAMWRSSDSMVYLPPP-SVAKVV-NTDDYVTRTGIYYYAGSSRLLTVGHPYFKVGMNG-
VL1_HPV68 -MALWRASDNMVYLPPP-SVAKVV-NTDDYVTRTGMYYYAGTSRLLTVGHPYFKVPMSG-
VL1_HPVME -MALWRSSDNMVYLPPP-SVAKVV-NTDDYVTRTGIYYYAGTSRLLTVGHPYFKVPMSG-
VL1_HPV18 QMALWRPSDNTVYLPPP-SVARVV-NTDDYVTPTSIFYHAGSSRLLTVGNPYFRVPAGG-
VL1_HPV45 QMALWRPSDSTVYLPPP-SVARVV-STDDYVSRTSIFYHAGSSRLLTVGNPYFRVVPNG-
VL1_HPV51 -MALWRTNDSKVYLPPA-PVSRIV-NTEEYITRTGIYYYAGSSRLITLGHPYFPIPKTS-
VL1_HPV82 -MALWRTNDSKVYLPPA-PVSRIV-NTEEYITRTGIYYYAGSSRLITLGHPYFSIPKTN-
VL1_HPV26 -MALWRTSDSKVYLPPT-PVSRVV-NTDEYVTRTGIYYYAGSSRLLTLGHPYFSIPKTG-
VL1_HPV69 -MALRRTSDSKVYLPPT-PVSRVVRRMNMYTHR--IYYYAGSSRLLTLGHPYFPIPKSG-
VL1_HPV2A QMALWRPNESKVYLPPT-PVSKVI-STDVYVTRTNVYYHGGSSRLLTVGHPYYSIKKSN-
VL1_HPV57 QMAMWRPNESKVYLPPT-PVSKVL-STDVYVTRTNVYYHGGSSRLLTVGHPYYSIKKSG-
VL1_HPV61 -MALWRPGDGKVYLPPT-PVSKVI-STDRYVQRTNLFYYGGSSRLLTVGHPYCSLQLDGL
VL1_HPV62 -MAMWRPGDGKVYLPPT-PVSKVL-STDTYVTRTNLFYYGGSSRLLTVGHPYCTLQVGQ-
VL1_HPV29 -MALWRSSDNLVYLPPT-PVSKVI-STDDYVTRTNIYYYAGSSRLLTVGHPHYSIPKSS-
VL1_HPV10 QMALWRSSDNLVYLPPT-PVSKVL-STDDYVTRTNIYYYAGTSRLLTVGHPYFPIPKSS-
VL1_HPV28 -MALWRSSDNLVYLPPT-PVSKVL-STDDYVTRTNIYYYAGTSRLLTVGHPYFPIPKSS-
VL1_HPV03 QMALWRSSDNLVYLPPT-PVSKVL-STDDYVTRTNIYYYAGSSRLLTVGHPYFAIPKSS-
VL1_HPV56 QMATWRPSENKVYLPPT-PVSKVV-ATDSYVKRTSIFYHAGSSRLLAVGHPYYSVTKDN-
VL1_HPV66 -MAMWRPSDNKVYLPPT-PVSKVV-ATDTYVKRTSIFYHAGSSRLLAVGHPYYSVSKSG-
VL1_HPV30 QMAVWRPSETKVYLPPT-PVSKVV-PTDAYVKRTNIFYHAGSSRLLAVGHPYYSISKAG-
VL1_HPV53 -MAVWRPSDSKVYLPPT-PVSKVI-TTDAYVKRTTIFYHAGSSRLLTVGHPYYPISKSG-
VL1_BPV3 -MSFWLPSQGKLYLPPPTAVTQYL-DTDDFVTRTDTFYHTNTERLLFVGHPYFDIKRED-
VL1_BPV4 -MSFWVPNSAKLYLPPPTPVTQFL-DTDEFVTRTDIFYHTSTDRLLFVGHPYFRPKKRR-
VL1_HPV24 -MSVWLPASGKVYLPPSTPVAKVQ-STDEYIQRTNIFYHAYSDRLLTVGHPYFNVYNND-
VL1_HPV19 QMAVWQAASGKVYLPPSTPVARVQ-STDEYVQRTNIYYHAYSDRLLTVGHPYFNVYNVA-
VL1_HPV25 -MAVWQAASGKVYLPPSTPVARVQ-STDEYVQRTNIYYHAYSDRLLTVGHPYFNVYNVQ-
VL1_HPV21 -MAVWQAASGKVYLPPSTPVARVQ-STDEYVQRTNIYYHAYSDRLLTVGHPYFNVYDVN-
VL1_HPV14 -MAVWQAASGKVYLPPSTPVARVQ-STDEYVQRTNIYYHAYSDRLLTVGHPYFNIYDVQ-
VL1_HPV20 -MAVWQAASGKVYLPPSTPVARVQ-STDEYVQRTNIYYHAYSDRLLTVGHPYFNIYDIQ-
VL1_HPV47 -MAVWHSANGKVYLPPSTPVARVQ-STDEYIQRTNIYYHANTDRLLTVGHPYFNVYNNN-
VL1_HPV36 -MAVWHSANGKVYLPPSTPVARVQ-STDEYIQRTNIYYHAFSDRLLTVGHPYFNVYDIT-
VL1_HPV05 -MAVWHSANGKVYLPPSTPVARVQ-STDEYIQRTNIYYHAFSDRLLTVGHPYFNVYNIN-
VL1_HPV5B -MAVWHSANGKVYLPPSTPVARVQ-STDEYIQRTNIYYHAFSDRLLTVGHPYFNVYNIT-
VL1_HPV12 -MAVWQAAHGKVYLPPSTPVARVQ-STDEYIQRTNIYYHANTDRLLTVGHPYFNVYDNT-
VL1_HPV08 -MAVWQSATGKVYLPPSTPVARVQ-STDEYIQRTNIYYHANTDRLLTVGHPYFNVYNNN-
VL1_HPV49 MTSLWLPATGKVYLPPSTPVARVQ-STDEYIQRTDIYYHANSDRLLTVGHPYFDVRDTA-
VL1_HPV09 -MSLWLPASGKVYLPPATPVARVQ-STDEYVERTNIFYHAISDRLLTVGHPYYDVRSGD-
VL1_HPV15 -MTLWLPTTGKVYLPPTPPVARVQ-STDEYVERTNVFYHAMSDRLLTVGHPYFDVRSVN-
VL1_HPV17 -MTLWLPTTGKVYLPPTPPVARVQ-STDEYVERTNIFYHAMSDRLLTVGHPFYDVRSTD-
VL1_HPV37 -MTLWLPATGKVYLPPTPPVARVQ-STDDYVERTNVFYHAMSDRLLTVGHPYYDVRSSD-
VL1_HPV38 -MTLWLPASGKIYLPPTPPVARVQ-STDEYVERTDIYYHATSDRLLTVGHPYFDVRSQD-
VL1_HPV22 -MTLWLPTSGKIYLPPTPPVARVQ-NTDEYVERTDIYYHAISDRLLTVGHPYFDVRSSD-
VL1_HPV23 -MTLWLPASGKIYLPPTPPVARVQ-STDEYVERTDIYYHATSDRLLTVGHPYFDVRSPD-
VL1_HPV48 -MALWSAVPGKVYLPPSAPVARVL-RTDEYVQETDVYFYTSTERLLIVGNPYFDVENRD-
VL1_HPV50 -MAHWSSTSGKLYLPPSTPVARVL-STDEYVKETDVYFHARSERLLIVGHPYYDIEDGG-
VL1_HPV60 -MALWLQTAGQLYLPPSKPVARVL-STDEYVQPTNLVFHTGTDRMLIVGHPYFDIIDSG-
VL1_HPV04 -MSSWLSTTGKVYLPPAQPVARVL-ETDEYITGTSLYFHAGTERLLTVGHPYFPVKDVQ-
VL1_HPV65 -MASWLSAKGKVYLPPAQPVARVL-ETDEYITGTSLYFHAGTERLLTVGHPYFPVKDVQ-
VL1_HPV41 QMAVWLPGPNRFYLPPQ-PIQRTL-NTEEYVRRTSTFLHAATDRLLTVGHPFYNITNAD-
VL1_CRPVK -MAVWLSTQNKFYLPPQ-PVTKIP-STDEYVTRTNVFYYASSDRLLTVGHPYYEIRDKG-
VL1_COPV6 -MAVWLPAQNKFYLPPQ-PSTKVL-STDEYVSRTNIFYHASSERLLTVGHPFYEIYKEE-
VL1_HPV1 QMAVWLPAQNKFYLPPQ-PITRIL-STDEYVTRTNLFYHATSERLLLVGHPLFEISSNQ-
VL1_HPV63 -MAVWLPAQNKFYLPTQ-PITKIL-SSDDYVSRTNIFYHATSDRLLIVGHPLYEVTRAN-
. *.*. . : : : : *:: * .
VL1_BPV5 -------IPKVSGNQYRVFRVQLPDPNQFALPDKNLHNPAKERLVWAILGLQVSRGQPLG
VL1_BPV1 -----KTVPKVSANQYRVFKIQLPDPNQFALPDRTVHNPSKERLVWAVIGVQVSRGQPLG
VL1_BPV2 -----KTVPKVSANQFRVFKIQLPDPNQFALPDRTVHNPSKERLVWAVIGVQVSRGQPLG
VL1_PAPVD ---KHTTVPKVSPNQYRVFRVALPDPNQFALPDKALHNPSKERLVWAVVGVQVSRGQPLG
VL1_PAPVE ---SGKTIPKVSPNQYRVFRILLPDPNQFALPDKAMYDPSKERLVWAVVGVQVSRGQPLG
VL1_HPV43 ---GKITVPKVSGYQYRVFRVKLPDPNKFGFSETTLVTSDTQRLVWGCVGVEIGRGQPLG
VL1_HPV40 ---GDISVPKVSGHQYRVFRVRLPDPNKFGLSDTSLFNSETQRLVWACVGVEVGRGQPLG
VL1_HPV07 ---GDVSVPKVSGHQYRVFRVRLPDPNKFGLSDTSLFNSETQRLVWACVGVEVGRGQPLG
VL1_HPV11 ----KTVVPKVSGYQYRVFKVVLPDPNKFALPDSSLFDPTTQRLVWACTGLEVGRGQPLG
VL1_HPV6A ----KTVVPKVSGYQYRVFKVVLPDPNKFALPDSSLFDPTTQRLVWACTGLEVGRGQPLG
VL1_HPV6B ----KTVVPKVSGYQYRVFKVVLPDPNKFALPDSSLFDPTTQRLVWACTGLEVGRGQPLG
VL1_HPV44 ----KTLVPKVSGFQYRVFKMVLPDPNKFALPDTSIYDPTTQRLVWACIGLEVGRGQPLG
VL1_HPV55 ----KTLVPKVSGFQYRVFKVVLPDPNKFALPDTSIYDPTTQRLVWACIGLEVGRGQPLG
VL1_HPV13 ----KTVVPKVSGYQFRVFKVVLPDPNKFALPDTSIFDSTSQRLVWACTGLEVGRGQPLG
VL1_PCPV1 ----KTIVPKVSGFQFRVFKIVLPDPNKFALPDTSIFDSTSQRLVWACIGLEVGRGQPLG
VL1_HPV34 -GKRKIAVPKVSGLQYRVFRIRLPDPNKFGFPDASFYNPDKERLVWACAGVEVGRGQPLG
VL1_HPV32 ---NRTSIPKVSGLQYRVFRVRLPDPNKFTLPETNLYNPETQRMVWACVGLEVGRGQPLG
VL1_HPV42 ---NKTSIPKVSGLQYRVFRVRLPDPNKFTLPETNLYNPETQRMVWACVGLEVGRGQPLG
VL1_HPV54 ---NKQSIPKVSGYQYRVFRVQLPDPNKFGLPDPSLYNPETQRLVWACTGVEVGRGQPLG
VL1_RHPV1 ---NKVSVPKVSGLQYRVFRVRLPDPNKFGLPDANFYDPNTQRLVWACLGVEVGRGQPLG
VL1_HPV52 GNGKKVLVPKVSGLQYRVFRIKLPDPNKFGFPDTSFYNPETQRLVWACTGLEIGRGQPLG
VL1_HPV67 -NTKKVLVPKVSGLQYRVFRVRLPDPNKFGFPDTSFYNPDTQRLVWACVGIEIGRGQPLG
VL1_HPV33 -NAKKLLVPKVSGLQYRVFRVRLPDPNKFGFPDTSFYNPDTQRLVWACVGLEIGRGQPLG
VL1_HPV58 -NNKKVLVPKVSGLQYRVFRVRLPDPNKFGFPDTSFYNPDTQRLVWACVGLEIGRGQPLG
VL1_HPV35 --SNKIAVPKVSGLQYRVFRVKLPDPNKFGFPDTSFYDPASQRLVWACTGVEVGRGQPLG
VL1_HPV31 -NPKKIVVPKVSGLQYRVFRVRLPDPNKFGFPDTSFYNPETQRLVWACVGLEVGRGQPLG
VL1_HPV16 --NNKILVPKVSGLQYRVFRIHLPDPNKFGFPDTSFYNPDTQRLVWACVGVEVGRGQPLG
VL1_HPV70 --GRKQEIPKVSAYQYRVFRVSLPDPNKFGLPDPSLYNPDTQRLVWACIGVEIGRGQPLG
VL1_HPV39 --GRKQDIPKVSAYQYRVFRVTLPDPNKFSIPDASLYNPETQRLVWACVGVEVGRGQPLG
VL1_HPV68 --GRKQGIPKVSAYQYRVFRVTLPDPNKFSVPESTLYNPDTQRMVWACVGVEIGRGQPLG
VL1_HPVME --GRKQDIPKVSAYQYRVFRISLPDPNKFSLPESTLYNPDTQRLVWACVGVEIGRGQPLG
VL1_HPV18 --GNKQDIPKVSAYQYRVFRVQLPDPNKFGLPDTSIYNPETQRLVWACAGVEIGRGQPLG
VL1_HPV45 -AGNKQAVPKVSAYQYRVFRVALPDPNKFGLPDSTIYNPETQRLVWACVGMEIGRGQPLG
VL1_HPV51 ---TRAAIPKVSAFQYRVFRVQLPDPNKFGLPDPNLYNPDTDRLVWGCVGVEVGRGQPLG
VL1_HPV82 ---TRAEIPKVSAFQYRVFRVQLPDPNKFGLPDPNLFNPDTDRLVWGCVGVEVGRGQPLG
VL1_HPV26 ---QKAEIPKVSAYQYRVFRVHLPDPNKFGLPDPQLYNPDTERLVWACVGVEVGRGQPLG
VL1_HPV69 ---STAEIPKVSAYQYRVFRVHLPDPNKFGLPDPQLYNPETERLVWACVGVEVGRGQPLG
VL1_HPV2A ---NKVAVPKVSGYQYRVFHVKLPDPNKFGLPDADLYDPDTQRLLWACVGVEVGRGQPLG
VL1_HPV57 --NNKVSVPKVSGYQYRVFHVKLPDPNKFGLPDANLYDPDTQRLLWACVGVEVGRGQPLG
VL1_HPV61 -QGKKNTIPKVSGYQYRVFRVQLPDPNKFALPDGTLYNPDTERMVWACRGIEVGRGQPLG
VL1_HPV62 --GKRATIPKVSGYQYRVFRVKLPDPNKFTLPDATLYNPDTERMVWACRGIEVGRGQPLG
VL1_HPV29 --GNKVDVPKVSAFQYRVFRVRLPDPNKFGLPDARIYNPEAERLVWACTGVEVGRGQPLG
VL1_HPV10 --NNKVDVPKVSAFQYRVFRVRLPDPNKFGLPDARIYNPDAERLVWACTGVEVGRGQPLG
VL1_HPV28 --TNKADVPKVSAFQYRVFRVRLPDPNKFGLPDARIYNPDAERLVWACTGVEVGRGQPLG
VL1_HPV03 --NSKMDIPKVSAFQYRVFRVRLPDPNKFGLPDARIYNPDAERLVWACTGVEVGRGLPLG
VL1_HPV56 ---TKTNIPKVSAYQYRVFRVRLPDPNKFGLPDTNIYNPDQERLVWACVGLEVGRGQPLG
VL1_HPV66 ---TKTNIPKVSAYQYRVFRVRLPDPNKFGLPDPSFYNPDQERLVWACVGLEVGRGQPLG
VL1_HPV30 --NSKTDVPKVSAFQYRVFRVRLPDPNKFGLPDTNVFNPEQERLVWACVGLEIGRGQPLG
VL1_HPV53 ----KADIPKVSAFQYRVFRVRLPDPNKFGLPDTNIFNPDQERLVWACVGLEIGRGQPLG
VL1_BPV3 ----KVLVPKVSGSQFRVFRLKFPDPNKFSFPDPNVYNSDNQRLVWALRGIEICRGQPLG
VL1_BPV4 ----HRCCSQMSGSQFRVFRLKFPDPNKFSFPTQDIYNPEKQRLVWAVRGIEICRGQPLG
VL1_HPV24 --GTVLEVPKVSGNQHRVFRLKLPDPNRFALADMSVYNPEKERLVWGCRGVEIGRGQPLG
VL1_HPV19 --GSKLEIPKVSGNQHRVFRLKLPDPNRFALADMSVYNPDKERLVWGCRGIEIGRGQPLG
VL1_HPV25 --GSKLQIPKVSGNQHRVFRLKLPDPNRFALADMSVYNPDKERLVWACRGIEIGRGQPLG
VL1_HPV21 --SAKIKVPKVSGNQHRVFRLKLPDPNRFALADMSVYNPDKERLVWACRGIEIGRGQPLG
VL1_HPV14 --SAKIKVPKVSGNQHRVFRLKLPDPNRFALADMSVYNPDKERLVWACRGIEIGRGQPLG
VL1_HPV20 --GTKIKVPKVSGNQHRVFRLKLPDPNRFALADMSVYNPDKERLVWGCRGIEIGRGQPLG
VL1_HPV47 --GTTLEVPKVSGNQHRVFRLKLPDPNRFALADMSVYNPDKERLVWACRGLEIGRGQPLG
VL1_HPV36 --GNKLEVPKVSGNQHRVFRLKLPDPNRFALADMSVYNPDKERLVWSCRGLEIGRGQPLG
VL1_HPV05 --GDKLEVPKVSGNQHRVFRLKLPDPNRFALPDMSVYNPDKERLVWACRGLEIGRGQPLG
VL1_HPV5B --GDKLEVPKVSGNQHRVFRLKLPDPNRFALADMSVYNPDKERLVWACRGLEIGRGQPLG
VL1_HPV12 --GKKLEVPKVSGNQHRVFRLKLPDPNRFALADMSVYNPDRERLVWACRGLEISRGQPLG
VL1_HPV08 --GDTLQVPKVSGNQHRVFRLKLPDPNRFALADMSVYNPDKERLVWACRGLEISRGQPLG
VL1_HPV49 -DNSKILVPKVSGNQYRAFRLLLPDPNRFALVDMNIYNPEKERLVWACRGLEIGRGQPLG
VL1_HPV09 --GQRIEVPKVSGNQYRAFRISLPDPNRFALADMSVYNPDKERLVWACRGIEIGRGQPLG
VL1_HPV15 --GGSIEVPKVSGNQYRAFRVTFPDPNRFALADMSVYNPEKERLVWACVGLEIGRGQPLG
VL1_HPV17 --GLRIEVPKVSGNQYRAFRVTLPDPNKFALADMSVYNPEKERLVWACAGLEIGRGQPLG
VL1_HPV37 --GLKIEVPKVSGNQYRAFRVRLPDPNKFALADMSVYNPEKERLVWACAGLEIGRGQPLG
VL1_HPV38 --GQKIEVPKVSGNQYRSFRVTFPDPNKFALADMSVYDPDKYRLVWACKGLEIGRGQPLG
VL1_HPV22 --GAKIEVPKVSGNQFRAFRVTFPDPNKFALGDMTIHDPERYRLVWACKGLEIGRGQPLG
VL1_HPV23 --GSKIDVPKVSGNQFRAFRVTFPDPNKFALADMTIYDPDKYRLVWACAGLEIGRGQPLG
VL1_HPV48 ----TITVPKVSANQYRVFRCKLPDPNKFALVDKNLYNSDKERLVWKLVGLEVGRGGPLG
VL1_HPV50 ----DIKVPKVSANQYRVFRCELPDPNKFALIDTTLYNSDTERLVWKLVGIEVGRGGPLG
VL1_HPV60 --SNNITVPKCSGNQFRVMRLLFPDPNKFAMIDRAVFNPERERLVWRLEGLEIGRGGPLG
VL1_HPV04 -EPHKVLVPKVSGSQFRVFRFNLPDPNRFALIDNGFYDSDHERLVWKLRGIEIGRGGPLG
VL1_HPV65 -DQHKVLVPKVSGSQYRVFRFYLPDPNRFALIDNGFYDSDHERLVWRLRGIEIGRGGPLG
VL1_HPV41 ---GKEVVPKVSSNQFRAFRVRFPNPNTFAFCDKSLFNPDKERLVWGIRGIEVSRGQPLG
VL1_CRPVK ----TMLVPKVSPNQYRVFRIKLPDPNKFAFGDKQLYDPEKERLVWCLRGIEVNRGQPLG
VL1_COPV6 -RSEEVIVPKVSPNQYRVFRLLLPDPNNFAFGDKSLFDPEKERLVWGLRGLEIGRGQPLG
VL1_HPV1 ----TVTIPKVSPNAFRVFRVRFADPNRFAFGDKAIFNPETERLVWGLRGIEIGRGQPLG
VL1_HPV63 --DNTMTVPKVSPNQYRVFRVRFPDPNRFAFGDKDIFDPETERLVWGLRGIEIGRGQPLG
.: * .* :. :.:** * . . . *::* *::: ** ***
VL1_BPV5 APVTGNQLFNVWTDAENVTAKR--ALP--------GSDDRKQLGMDVKQTQMLLIGQSPA
VL1_BPV1 GTVTGHPTFNALLDAENVNRKV--TTQ--------TTDDRKQTGLDAKQQQILLLGCTPA
VL1_BPV2 GTVTGHPTFNALLDAENVNRKV--TAQ--------TTDDRKQTGLDAKQQQILLLGCTPA
VL1_PAPVD GEVRGHSYFNTFLDAENVSKKV--TAQ--------GTDDRKQAGMDTKQQQVLMLGCTPA
VL1_PAPVE GSVSGHSYQNTLIDAENVSKKV--NAQ--------GTDDRKQGGMDVKQQQILLLGCTPA
VL1_HPV43 VGISGHPYLNKYDDTENPSGYG--TSP--------GQDNRENVAMDYKQTQLCIVGCTPP
VL1_HPV40 VGVSGHPYFNKDEDVENSSAYG--TGP--------GQDSRENVAMDYKQTQLCMLGCTPP
VL1_HPV07 VGISGHPYFNKDEDVENSSVYG--TVP--------GQDSRENVAMDYKQTQLCIVGCTPP
VL1_HPV11 VGVSGHPLLNKYDDVENSGGYG--GNP--------GQDNRVNVGMDYKQTQLCMVGCAPP
VL1_HPV6A VGVSGHPFLNKYDDVENSGS-G--GNP--------GQDNRVNVGMDYKQTQLCMVGCAPP
VL1_HPV6B VGVSGHPFLNKYDDVENSGS-G--GNP--------GQDNRVNVGMDYKQTQLCMVGCAPP
VL1_HPV44 VGISGHPLLNKLDDVENSASYA--AGP--------GQDNRVNVAMDYKQTQLCLVGCAPP
VL1_HPV55 VGISGHPLLNKLDDVENSASYA--ASP--------GQDNRVNVAMDYKQTQLCLVGCAPP
VL1_HPV13 VGISGHPLLNKYDDVENSASYA--ANP--------GQDNRVNVAMDYKQTQLCLVGCAPP
VL1_PCPV1 VGISGHPLLNKFDDVENSASYA--VNP--------GQDNRVNVAMDYKQTQLCLVGCAPP
VL1_HPV34 IGTSGNPFMNKLEDTENAAKYI--GGN--------IADSRECMSVDYKQTQLCIVGCKPP
VL1_HPV32 VGLSGHPLLNRLDDTENGPRYA--AGP--------GTDNRENVSMDCKQTQLCLVGCKPA
VL1_HPV42 VGISGHPLLNKLDDTENAPTYG--GGP--------GTDNRENVSMDYKQTQLCLVGCKPA
VL1_HPV54 LGLSGHPLLNKLDDTENAPKYV--GA---------GADNRENVSMDYKQTQLCILGCTPP
VL1_RHPV1 VGTSGHPLLNKLDDTENGPKVA--GGQ--------GADNRECVSMDYKQTQLCMLGCKPP
VL1_HPV52 VGISGHPLLNKFDDTETSNKYA--GKP--------GIDNRECLSMDYKQTQLCILGCKPP
VL1_HPV67 VGISGHPLLNKFDDTETNNKYP--SQP--------GTDNRECLSMDAKQTQLCIIGCKPP
VL1_HPV33 VGISGHPLLNKFDDTETGNKYP--GQP--------GADNRECLSMDYKQTQLCLLGCKPP
VL1_HPV58 VGVSGHPYLNKFDDTETSNRYP--AQP--------GSDNRECLSMDYKQTQLCLIGCKPP
VL1_HPV35 VGISGHPLLNKLDDTENSNKYV--GNS--------GTDNRECISMDYKQTQLCLIGCRPP
VL1_HPV31 VGISGHPLLNKFDDTENSNRYA--GGP--------GTDNRECISMDYKQTQLCLLGCKPP
VL1_HPV16 VGISGHPLLNKLDDTENASAYA--ANA--------GVDNRECISMDYKQTQLCLIGCKPP
VL1_HPV70 VGVSGHPLYNRLDDTENSHFSS--AVS--------TQDSRDNVSVDYKQTQLCIIGCVPA
VL1_HPV39 VGISGHPLYNRQDDTENSPFSS--TT---------NKDSRDNVSVDYKQTQLCIIGCVPA
VL1_HPV68 VGLSGHPLYNRLDDTENSPFSS--NKN--------PKDSRDNVAVDCKQTQLCIIGCVPA
VL1_HPVME VGLSGHPLYNRLDDTENSPFSS--NKN--------PKDSRDNVSVDYKQTQLCIIGCVPA
VL1_HPV18 VGLSGHPFYNKLDDTESSHAAT--SNV--------SEDVRDNVSVDYKQTQLCILGCAPA
VL1_HPV45 IGLSGHPFYNKLDDTESAHAAT--AVI--------TQDVRDNVSVDYKQTQLCILGCVPA
VL1_HPV51 VGLSGHPLFNKYDDTENSRIAN--GNA--------QQDVRDNTSVDNKQTQLCIIGCAPP
VL1_HPV82 VGLSGHPLFNKYDDTENSRFAN--GND--------QQDVRDNISVDNKQTQLCIIGCAPP
VL1_HPV26 IGLSGHPLFNKLDDTENSHLAT--VNA--------DTDNRDNVSVDNKQTQLCIIGCTPP
VL1_HPV69 VGLSGHPLFNKLDDTENSHLAT--ANA--------DTDNRDNVCVDNKQTQLCIIGCTPP
VL1_HPV2A VGVSGHPYYNRLDDTENAHT----PDT--------ADDGRENISMDYKQTQLFILGCKPP
VL1_HPV57 VGISGHPYYNKQDDTENSHN----PDA--------ADDGREYISMDYKQTQLFILGCKPP
VL1_HPV61 VGTSGHPLYNRLDDTENTTLLV--AE---------SSDSRDNVSVDYKQTQLLIVGCKPP
VL1_HPV62 VGTSGHPLYNRLDDTENTSLLA--AA---------NDDSRDNISVDYKQTQLLIVGCKPP
VL1_HPV29 VGLSGHPLYNKLNDTENSNIAH--AEN--------GQDSRDNIAVDYKQTQLCILGCTPP
VL1_HPV10 VGLSGHPLYNKLEDTENSNIAH--GPI--------GQDSRDNISVDNKQTQLCIIGCTPP
VL1_HPV28 VGLSGHPLYNKLDDTENSNIAH--GDI--------GQDSRDNISLDNKQTQLCIVGCTPP
VL1_HPV03 VGLSGHPLYNKLDDTENSNIAH--GDI--------GKDSRDNISVDNKQTQLCIVGCTPP
VL1_HPV56 AGLSGHPLFNRLDDTESSNLAN--NNV--------IEDSRDNISVDGKQTQLCIVGCTPA
VL1_HPV66 AGLSGHPLFNRLDDTEVSNLAG--NNV--------IEDSRDNISVDCKQTQLCIVGCAPA
VL1_HPV30 VGVSGNPLFNKLDDTESSTIAN--QDT--------AEDSRDNISVDPKQTQLCIIGCTPA
VL1_HPV53 VGVSGHPLFNRLDDTESSSIAI--QDT--------APDSRDNVSVDPKQTQLCIIGCAPA
VL1_BPV3 IGVTGHPSFNKFKDAENNNNKT--PDQ--------TTDDRVNMAVDPKQVQMFIVGCTPC
VL1_BPV4 VGVTGHPSFNKFKDAENLNQNS--DQ---------KEDDRVNVCMDPKQVQLFIVGCVPC
VL1_HPV24 VGTSGHPLFNKVNDTENPVSYRTQAS---------STDDRQNTSFDPKQIQMFIIGCAPC
VL1_HPV19 VGSVGHPLFNKVGDTENPNSYK--GT---------STDDRQNVSFDPKQLQMFIIGCAPC
VL1_HPV25 VGSVGHPLFNKVGDTENPNSYK--AS---------STDDRQNVSFDPKQLQMFIIGCAPC
VL1_HPV21 VGSVGHPLFNKVGDTENPSSYK--TQPN-------STDDRQNVSFDPKQLQMFIIGCAPC
VL1_HPV14 VGSVGHPLFNKVGDTENPNSYRQQAN---------STDDRQNVSFDPKQLQMFIIGCAPC
VL1_HPV20 VGSVGHPLFNKLGDTENPNSYK--GN---------STDDRQNVSFDPKQLQMFIIGCAPC
VL1_HPV47 VGSTGHPYFNKVKDTENSNSYI--TN---------SKDDRQDTSFDPKQIQMFIVGCTPC
VL1_HPV36 VGSTGHPLFNKLKDTENSNSYI--KS---------SKDDRQDTSFDPKQIQMFIVGCTPC
VL1_HPV05 VRSTGHPYFNKVKDTENSNAYI--TF---------SKDDRQDTSFDPKQIQMFIVGCTPC
VL1_HPV5B VGSTGHPYFNKVKDTENSNAYI--TFSKDGQNTAFSKDDRLNTSFDPKQIQMFIVGCTPC
VL1_HPV12 VGSTGHPYFNKIKDTENSNNYA--TG---------SKDDRQNTSFDPKQIQMFIVGCTPC
VL1_HPV08 VGSTGHPYFNKVKDTENSNSYT--TT---------STDDRQNTSFDPKQIQMFIVGCTPC
VL1_HPV49 VGTTGHPLFNKVKDTENANNYI--VT---------SKDDRQDTSFDPKQVQMFIIGCTPC
VL1_HPV09 VGTSGHPLFNKVRDTENSSNYQ--GT---------TMDDRQNTSFDPKQVQMFIIGCIPC
VL1_HPV15 VGTSGHPLFNKVKDTENNSNYQ--GN---------STDDRQNTSFDPKQVQMFVVGCVPC
VL1_HPV17 VGTTGHPLFNKLRDTENNSSYQ--GG---------STDDRQNTSFDPKQVQMFVVGCVPC
VL1_HPV37 VGTTGHPLFNKLRDTENNSNYQ--GG---------SRDDRQNTSFDPKQVQMFVVGCVPC
VL1_HPV38 VGTTGHPLFNKVRDTENSSNYQ--NT---------STDDRQNTSFDPKQVQMFIIGCTPC
VL1_HPV22 VGTTGHPLFNKLHDTENPTERQ--EG---------TSDDRRNVSFDPKQVQMFIIGCIPC
VL1_HPV23 VGSTGHPLFNKLRDAENSSERQ--EG---------TVDDRRNISFDPKQVQMFIIGCTPC
VL1_HPV48 VGSTGHPLLNKIGDTENPSFYL--GEQ--------TKDERQNVSMDPKQSQILIVGCAPA
VL1_HPV50 VGSTGHPLFNKVGDTENPSFYL--GPQ--------EKDERQNLSIDPKQTQLLIVGCKPA
VL1_HPV60 IGTSGHPLFNKYGDTENPAAYPLKQNN--------GDDNRMDVSMDPKQMQLFIVGCKPA
VL1_HPV04 IGTTGHPLYNKFGDTENPNGYK--KQ---------SDDNRQDVSLDPKQTQMFIIGCTPA
VL1_HPV65 IGTTGHPLYNKFGDSENPNGYR--KQ---------SDDNRQDVSLDPKQTQMFIIGCTPA
VL1_HPV41 IGVTGNPFFNKFDDAENPYNGI--NKNNITDQ---GSDSRLSIAFDPKQTQLLIVGAKPA
VL1_CRPVK VSVTGNPIFNKFDDVENPTKYY--NNHA---D---QQDYRKSMAFDPKQVQLLMLGCVPA
VL1_COPV6 ISVTGHPTFDRYNDVENPNKNL--AGHG---G---GTDSRVNMGLDPKQTQMFMIGCKPA
VL1_HPV1 IGITGHPLLNKLDDAENPTNYI--NTHA-------NGDSRQNTAFDAKQTQMFLVGCTPA
VL1_HPV63 VGISGNPLLNRFDDAENPSRYN--NTHA-------TGDNRQNVAFDAKQTQMFLIGCTPA
*: : * * * * .* ** *: ::* *
VL1_BPV5 IGEYWGKAIPCE--GKQPKAGD--CPPIELKNKPIEDGDMMDIGFGACDWKDFSQNLSDV
VL1_BPV1 EGEYWTTARPCV--TDRLENGA--CPPLELKNKHIEDGDMMEIGFGAANFKEINASKSDL
VL1_BPV2 EGEYWTTARPCV--TDRLENGA--CPPLELKNKHIEDGDMMEIGFGAADFKTLNASKSDL
VL1_PAPVD IGEYWTKARPCV--TDRPDAGS--CPPIELKLSFIEDGDMMDIGFGAANFKELNATKSDL
VL1_PAPVE IGEYWTTARPCV--TDRPETGS--CPPIELKNKPIEDGDMMDIGFGAANFKELNATKSDL
VL1_HPV43 MGEYWGQGVPCN--ASGVTQGD--CPVIELKSEVIQDGDMVDTGFGAMDFASLQASKSDV
VL1_HPV40 IGEYWGKGTPCN--ASRVTLGD--CPVLELKTEVIQDGDMVDTGFGAMDFASLQANKSDV
VL1_HPV07 IGEYWGMGTPCN--ASKVSPGD--CPVLELKSEVIEDGDMVDAGFGAMDFASLQANKSDV
VL1_HPV11 LGEHWGKGTQCS--NTSVQNGD--CPPLELITSVIQDGDMVDTGFGAMNFADLQTNKSDV
VL1_HPV6A LGEHWGKGKQCT--NTPVQAGD--CPPLELITSVIQDGDMVDTGFGAMNFADLQTNKSDV
VL1_HPV6B LGEHWGKGKQCT--NTPVQAGD--CPPLELITSVIQDGDMVDTGFGAMNFADLQTNKSDV
VL1_HPV44 LGEHWGKGKQCN--NVSVKDGD--CPPLELITSVIEDGDMVDTGFGAMNFAELQPNKSDV
VL1_HPV55 LGEHWGKGKPCN--NGSVNSGD--CPPLELITSVIEDGDMVDTGFGAMNFAELQPNKSDV
VL1_HPV13 LGEHWGQGKQCT--GVNVQPGD--CPPLELISSVIQDGDMVDTGFGAMNFAELQSNKSDV
VL1_PCPV1 LGEHWGKGTQCS--GVSVQDGD--CPPLELVTSVIQDGDMVDTGFGAMDFAQLQSNKSDV
VL1_HPV34 LGEHWGTGTPCG----TQNAGE--CPPLELKNTTIQDGDMIDVGFGAMDFKALQANKSDV
VL1_HPV32 IGEHWGKGAACS----AQSNGD--CPPLELQNSVIQDGDMADVGFGAMDFSALQTSKAEV
VL1_HPV42 IGEHWGKGTACT----PQSNGD--CPPLELKNSFIQDGDMVDVGFGALDFGALQSSKAEV
VL1_HPV54 IGEHWAKGNLCT--PNTLAAGD--CPPLELVNSYIQDGDMVDIGFGAMDFKTLQTSKSEV
VL1_RHPV1 VGEHWGKGNPCT----TGAAGD--CPALELVNSVIQDGDMVDTGYGAMDFNALQANKSDV
VL1_HPV52 IGEHWGKGTPCN--NNSGNPGD--CPPLQLINSVIQDGDMVDTGFGCMDFNTLQASKSDV
VL1_HPV67 TGEHWGKGTPCS--GNSNGPGA--CPPLELMNTVIEDGDMIDTGFGCMDFKSLQANKSDV
VL1_HPV33 TGEHWGKGVACT---NAAPAND--CPPLELINTIIEDGDMVDTGFGCMDFKTLQANKSDV
VL1_HPV58 TGEHWGKGVAC---NNNAAATD--CPPLELFNSIIEDGDMVDTGFGCMDFGTLQANKSDV
VL1_HPV35 IGEHWGKGTPCN--ANQVKAGE--CPPLELLNTVLQDGDMVDTGFGAMDFTTLQANKSDV
VL1_HPV31 IGEHWGKGSPCS--NNAITPGD--CPPLELKNSVIQDGDMVDTGFGAMDFTALQDTKSNV
VL1_HPV16 IGEHWGKGSPCT--NVAVNPGD--CPPLELINTVIQDGDMVDTGFGAMDFTTLQANKSEV
VL1_HPV70 MGEHWAKGKACK----STQQGD--CPPLELVNTAIEDGDMIDTGYGAMDFRTLQETKSEV
VL1_HPV39 IGEHWGKGKACK--PNNVSTGD--CPPLELVNTPIEDGDMIDTGYGAMDFGALQETKSEV
VL1_HPV68 IGEHWAKGKSCK--PTNVQQGD--CPPLELVNTPIEDGDMIDTGYGAMDFGTLQETKSEV
VL1_HPVME IGEHWAKGKSCK--PSNVQPGD--CPPLELVNTPIQDGDMIDTGYGAMDFSTLQETKSEV
VL1_HPV18 IGEHWAKGTACK--SRPLSQGD--CPPLELKNTVLEDGDMVDTGYGAMDFSTLQDTKCEV
VL1_HPV45 IGEHWAKGTLCK--PAQLQPGD--CPPLELKNTIIEDGDMVDTGYGAMDFSTLQDTKCEV
VL1_HPV51 IGEHWGIGTTCK--NTPVPPGD--CPPLELVSSVIQDGDMIDTGFGAMDFAALQATKSDV
VL1_HPV82 IGEHWATGTTCK--NVPVPQGD--CPPLELVSTVIEDGDMVDTGFGAMDFANLQATKSDV
VL1_HPV26 LGEHWGIGTICK--NTQTQRGD--CPPLELISSIIEDGDMIDTGFGAMDFTALQATKSDV
VL1_HPV69 LGEHWGVGTVCKNAQSQVQRGD--CPPLELISSVIEDGDMIDTGFGAMDFTALQATKCDV
VL1_HPV2A IGEHWSKGTTCN---GSSAAGD--CPPLQFTNTTIEDGDMVETGFGALDFATLQSNKSDV
VL1_HPV57 IGEHWSKGTTCS---GSSAVGD--CPPLQFTNTTIEDGDMVETGFGALDFAALQSNKSDV
VL1_HPV61 IGEHWTKGTACA--NPAPRPTD--CPPLEFTNTTIQDGDMVETGYGAIDFAALQENKSEV
VL1_HPV62 IGEHWTKGTLCP--NAAPAPTE--CPPLEFKNTTIQDGDMVETGYGAIDFKSLQESKSEV
VL1_HPV29 MGEHWGKGTVCA--RTSSAAGD--CPPLELMTTHIEDGDMVDTGYGAMDFAALQVNKSDV
VL1_HPV10 MGEHWGKGTPCR---NPPAQGD--CPPLELITSPIQDGDMVDTGYGAMDFTALQLNKSDV
VL1_HPV28 MGEHWGKGTPCR---QNTQQGD--CPPLELITAPIQDGDMVDTGFGAMDFAVLQANKSDV
VL1_HPV03 MGEHWGKGTPCK---QNASPGD--CPPLELITAPIQDGDMVDTGYGAMDFGNLQSNKSDV
VL1_HPV56 MGEHWTKGAVCK--STQVTTGD--CPPLALINTPIEDGDMIDTGFGAMDFKVLQESKAEV
VL1_HPV66 LGEHWTKGAVCK--STPGNTGD--CPPLALVNTPIEDGDMVDTGFGAMDFKLLQESKAEV
VL1_HPV30 IGEHWAKGTACR--SAPPAQGD--CPPLELVNSPIQDGDMVDIGFGAMDFKTLQESKSDV
VL1_HPV53 IGEHWTKGTACR--STPTTAGD--CPPLELINSPIEDGDMVDTGFGALNFKALQESKSDV
VL1_BPV3 DGEHWDVAQACD----RLEPGA--CPPIELKNTIIEDGEMCDTGFGNMNFQKLQASKSGA
VL1_BPV4 DGEHWDKAQACE----PQGPGD--CPPIELKNTKIQDGEMCDTGFGNMNFAALQASKSGA
VL1_HPV24 IGEHWEVAERCA--GDNNDAGR--CPPIKLVNSVIQDGDMADIGYGNLNFRTLQQSRSDV
VL1_HPV19 IGEHWDKALPCA--EQDIPQGS--CPPIELINSVIEDGDMADIGYGNLNFKALQQNRSDV
VL1_HPV25 IGEHWDKALPCD--DGNIQQGS--CPPIELINSVIEDGDMADIGYGNLNFKALQQNRADV
VL1_HPV21 LGEHWDKAIPCA--TDNPPPGS--CPPIELINSAIQDGDMADIGYGNLNFKALQQNRSDV
VL1_HPV14 MGEHWDRALPCV--EDKPPPGS--CPPIELKNTVIEDGDMADIGYGNLNFKALQENRSDV
VL1_HPV20 LGEHWDRALPCA--DDVPNPGS--CPPIELKNTAIQDGDMADIGYGNLNFKALQENRADV
VL1_HPV47 IGEHWDKAEPCG----EQQTGL--CPPIELKNTYIQDGDMADIGFGNINFKALQHSRSDV
VL1_HPV36 IGEHWDKAIPCE--KERQDNRL--CPPIELKTTYIEDGDMADIGFGNLNFKNLQESRSDV
VL1_HPV05 IGEHWDKAVPCA--ENDQQTGL--CPPIELKNTYIQDGDMADIGFGNMNFKALQDSRSDV
VL1_HPV5B IGEHWDKAVPCA--KNDQQTGL--CPPIELKNTYIEDGDMADIGFGNMNFKALQDSRSDV
VL1_HPV12 VGEHWEKALPCG--DAPAENGV--CPPIELKNTFIEDGDMADIGFGNMNFKTLQQNRSDV
VL1_HPV08 IGEHWEKAIPCA---EDQQQGL--CPPIELKNTVIEDGDMADIGFGNMNFKTLQQNRSDV
VL1_HPV49 MGEYWDAAKPCD---ADAGQGK--CPPLELINSVIQDGDMIDIGFGNINNKTLSVNRSDV
VL1_HPV09 LGEHWDKAKVCEK-DANNQLGL--CPPIELRNTVIEDGDMFDIGFGNINNKELSFNKSDV
VL1_HPV15 LGEHWDRALVCES-ERNNQAGK--CPPLELKNTVIEDGDMFDIGFGNINNKALSVTKSDV
VL1_HPV17 IGEHWDRAPVCEN-EQNNQTGL--CPPLELKNTVIEDGDMVDIGFGNINNKVLSFNKSDV
VL1_HPV37 MGEHWDKAPVCAS-EENNQTGQ--CPPLELKNTVIEDGDMFDIGFGNINNKVLSTNKSDV
VL1_HPV38 LGEYWDKAPVCD--NAGDQTGL--CPPLELKNSVIEDGDMFDIGFGNINNKTLSFNRSDV
VL1_HPV22 LGEYWDKAPVCE--DAGSQVGL--CPPLELKNGVIEDGDMFDIGFGNINNKTLSFNRSDV
VL1_HPV23 LGEYWDTAPVCK--DAGSQLGL--CPPLELKNSVIEDGDMFDIGFGNINNKTLSFNRSDV
VL1_HPV48 TGEYWDLAKPCN----DLENGA--APPIQLVNTVIQDGDMGDIGFGAANFPKLMQDRAGV
VL1_HPV50 VGEYWDLAEPCD--KNSLNNGK--CPPIQLVNSYIQDGDMGDIGFGNANFPKLQQDRAGV
VL1_HPV60 TGEHWDIAKPCD---PAPAKGS--CPPIKLTQSIIQDGEMCDTGFGNANFITLQEDKSGV
VL1_HPV04 IGEHWDKAEPCP--SPAPQQGD--CPPIELVNSYIQDGDMCDIGFGAFNFKALQADKSSA
VL1_HPV65 IGEHWDKAEPCA--SPVPQPGD--CPPIELVNTYIEDGDMCDIGFGAFNFKALQQDKSSA
VL1_HPV41 KGEYWDVAATCE--NPPLTKADDKCPALELKSSYIEDADMSDIGLGNLNFSTLQRNKSDA
VL1_CRPVK TGEHWAQAKQCA--EDPPQQTD--CPPIELVNTVIEDGDMCEIGFGAMDHKTLQASLSEV
VL1_COPV6 LGEHWSLTRWCT--GQVHTAGQ--CPPIELRNTTIEDGDMVDIGFGAMDFKALQHYKSGV
VL1_HPV1 SGEHWTSSR-CP--GEQVKLGD--CPRVQMIESVIEDGDMMDIGFGAMDFAALQQDKSDV
VL1_HPV63 TGEHWSIARRCA--GTQFQLGD--CPPIELVNTVIEDGDMFDIGLGAMDFGSLQANKADA
**:* * .* : : ::*.:* : * * : : .
VL1_BPV5 PLDLINSKSLYPDYLKMAEDSLGNSCFFYARREQVYVRHVYSRGGEQK-E--AIPK----
VL1_BPV1 PLDIQNEICLYPDYLKMAEDAAGNSMFFFARKEQVYVRHIWTRGGSEK-E--APTT----
VL1_BPV2 PLDIQNEICLYPDYLKMAEDAAGNSMFFFARKEQVYVRHIWTRGGSEK-E--APSK----
VL1_PAPVD PLDIANSICLYPDYLKMTEEAAGNSMFFFARKEQVYVRHIWTPWGTDK-E--LPPE----
VL1_PAPVE PLDIAKDICLYPDYLKMTEEAAGNSMFFFARKEQVYVRHIWSRGGTDK-E--MPPE----
VL1_HPV43 PLDLVNTKSKYPDYLGMAAEPYGNSLFFFLRREQMFLRHFFNKAGKTG-D--VVPS----
VL1_HPV40 PLDLCTSISKYPDYLGMAAEPYGNSLFFFLRREQMFVRHFFNRAGTTG-D--SVPT----
VL1_HPV07 PLDLCTSISKYPDYLGMAAEPYGNSLFFFLRREQMFVRHFFNRAGTTG-D--SVPN----
VL1_HPV11 PLDICGTVCKYPDYLQMAADPYGDRLFFYLRKEQMFARHFFNRAGTVG-E--PVPD----
VL1_HPV6A PIDICGTTCKYPDYLQMAADPYGDRLFFFLRKEQMFARHFFNRAGEVG-E--PVPD----
VL1_HPV6B PIDICGTTCKYPDYLQMAADPYGDRLFFFLRKEQMFARHFFNRAGEVG-E--PVPD----
VL1_HPV44 PLDICTATCKYPDYLQMAADPYGDRLFFYLRKEQMFARHFFNRAGTVG-E--DVSQ----
VL1_HPV55 PLDICTATCKYPDYLQMAADPYGDRLFFYLRKEQMFARHFFNRAGTVG-E--DIPQ----
VL1_HPV13 PLDICTSTCKYPDYLQMAADPYGDRLFFYLRKEQMFARHFFNRAGSVG-E--QIPA----
VL1_PCPV1 PLDICTATCKYPDYLQMAADPYGDRLFFSLRKEQMFARHFFNRAGTVG-E--QIPE----
VL1_HPV34 PIDISNTICKYPDYLGMAADPYGDSMWFYIRREQMFVRHLFNRAGTVG-D--AIPD----
VL1_HPV32 PLDIMNSISKYPDYLKMSAEAYGDNMFFFLRREQMFVRHLFNRAGTLG-E--PVPE----
VL1_HPV42 PLDIVNSITKYPDYLKMSAEAYGDSMFFFLRREQMFVRHLFNRAGAIG-E--PVPD----
VL1_HPV54 PLDVATSICKYPDYLKMAAEAYGDSLFFYLRREQMFVRHMLNRAGTMG-E--PVPN----
VL1_RHPV1 PIDICTSVCKYPDYLKMASDPYGDSLFFYLRREQMFVRHLFNRAGTMG-D--SVPD----
VL1_HPV52 PIDICSSVCKYPDYLQMASEPYGDSLFFFLRREQMFVRHFFNRAGTLG-D--PVPG----
VL1_HPV67 PLDICTSICKYPDYLGMASEAYGDSLFFFLRREQMFVRHLFNRAGKLG-E--DVPT----
VL1_HPV33 PIDICGSTCKYPDYLKMTSEPYGDSLFFFLRREQMFVRHFFNRAGTLG-E--AVPD----
VL1_HPV58 PIDICNSTCKYPDYLKMASEPYGDSLFFFLRREQMFVRHFFNRAGKLG-E--AVPD----
VL1_HPV35 PLDICSSICKYPDYLKMVSEPYGDMLFFYLRREQMFVRHLFNRAGTVG-E--TVPA----
VL1_HPV31 PLDICNSICKYPDYLKMVAEPYGDTLFFYLRREQMFVRHFFNRSGTVG-E--SVPT----
VL1_HPV16 PLDICTSICKYPDYIKMVSEPYGDSLFFYLRREQMFVRHLFNRAGAVG-E--NVPD----
VL1_HPV70 PLDICQSVCKYPDYLQMSADVYGDSMFFCLRKEQLFARHFWNRGGMVG-D--TIPS----
VL1_HPV39 PLDICQSICKYPDYLQMSADVYGDSMFFCLRREQLFARHFWNRGGMVG-D--AIPA----
VL1_HPV68 PLDICQSVCKYPDYLQMSADVYGDSMFFCLRREQLFARHFWNRGGMVG-D--TIPT----
VL1_HPVME PLDICQSVCKYPDYLQMSADVYGDSMFFCLRREQLFARHFWNRGGMVG-D--TIPT----
VL1_HPV18 PLDICQSICKYPDYLQMSADPYGDSMFFCLRREQLFARHFWNRAGTMG-D--TVPQ----
VL1_HPV45 PLDICQSICKYPDYLQMSADPYGDSMFFCLRREQLFARHFWNRAGVMG-D--TVPT----
VL1_HPV51 PLDISQSVCKYPDYLKMSADTYGNSMFFHLRREQIFARHYYNKLVGVG-E--DIPN----
VL1_HPV82 PLDIAQSVCKYPDYLKMSADTYGNSMFFHLRREQIFARHYYNKAGVVG-D--AIPD----
VL1_HPV26 PIDISQSTCKYPDYLKMSADTYGNSMFFFLRREQLFARHFYNKAGAVG-D--AIPT----
VL1_HPV69 PLDINQSICKYPDYLKMSADTYGNSMFFFLRREQLFARHFFNKAGTIG-D--SVPV----
VL1_HPV2A PLDICTNTCKYPDYLKMAAEPYGDSMFFSLRREQMFTRHFFNLGGKMG-D--TIPD----
VL1_HPV57 PLDICTNICKYPDYLKMAADPYGDSMFFSLRREQMFTRHFFNRGGSMG-D--ALPD----
VL1_HPV61 PLDICTTICKYPDYLQMAAEPYGDCMFFCLRREQMFARHFFNRQGVMG-E--ALPD----
VL1_HPV62 PLDICTSTCKYPDYLQMAAEPYGDCMFFCLRREQMFARHFFNRHGTMG-E--ALPT----
VL1_HPV29 PLDICQSTCKYPDYLGMAADPYGDSMFFFLRREQLFARHFFNRAGVVG-D--KIPD----
VL1_HPV10 PIDICQSTCKYPDYLGMAAEPYGDSMFFYLRREQLFARHFFNRASAVG-D--AIPD----
VL1_HPV28 PLDICQSTCKYPDYLGMAAEPYGDSMFFYLRKEQLFARHFFNRAGVAG-D--TIPE----
VL1_HPV03 PLDICQTTCKYPDYLGMAAEPYGDSMFFYLRKEQLFARHFLNRAGMAG-D--TVPD----
VL1_HPV56 PLDIVQSTCKYPDYLKMSADAYGDSMWFYLRREQLFARHYFNRAGKVG-E--TIPA----
VL1_HPV66 PLDIVQSTCKYPDYLKMSADAYGDSMWFYLRREQLFARHYFNRAGNVG-E--AIPT----
VL1_HPV30 PLDISQSTCKYPDYLKMSADAYGDSMWFYLRREQLFARHYFNRAGAIG-E--QLPS----
VL1_HPV53 PLDIVQSTCKYPDYLKMSADAYGDSMWFYLRREQLFTRHFFNRAGVIG-E--EIPN----
VL1_BPV3 PLDIVNQIVKYPDFLKMGSDPHGNSMFFYAKREQMYVRHLWSRGGTIG-E--EIPPNGEA
VL1_BPV4 PLDIVDQIVKYPDFLKMGNDPYGNSMFFYAKREQMYVRHLWARAGRVG-D--DIPTGESG
VL1_HPV24 SLDIVNETCKYPDFLKMQNDVYGDSCFFFARREQCYARHFFVRGGKPG-D--DIPGEQID
VL1_HPV19 SLDIVNETCKYPDFLKMQNDVYGDSCFFYARREQCYARHFFVRGGKTG-D--DIPAGQID
VL1_HPV25 SLDIVNETCKYPDFLKMQNDVYGDSCFFYARREQCYARHFFVRGGKTG-D--DIPAGQID
VL1_HPV21 SLDIVNETCKYPDFLKMQNDVYGDSCFFYARREQCYARHFFVRGGKTG-D--DIPAGQID
VL1_HPV14 SLDIVNEICKYPDFLKMQNDVYGDSCFFYARREQCYARHFFVRGGKTG-D--DIPAAQVD
VL1_HPV20 SLDIVNETCKYPDFLKMQNDVYGDSCFFYARREQCYARHFFVRGGKTG-D--DIPAGQID
VL1_HPV47 SLDIVNETCKYPDFLKMQNDVYGDACFFYARREQCYARHFFVRGGKTG-D--DIPGAQVG
VL1_HPV36 SLDIVNETCKYPDFLKMQNDVYGDACFFYARREQCYARHFFVRGGKTG-D--DIPDARID
VL1_HPV05 SLDIVNETCKYPDFLKMQNDIYGDACFFYARREQCYARHFFVRGGKTG-D--DIPRAQID
VL1_HPV5B SLDIVNETCKYPDFLKMQNDIYGDACFFYARREQCYARHFFVRGGKTG-D--DIPGAQID
VL1_HPV12 SLDIVNETCKYPDFLKMQNDVYGDACFFYARREQCYARHFFVRGGKTG-D--DIPDAQID
VL1_HPV08 SLDIVNEICKYPDFLKMQNDVYGDACFFYARREQCYARHFFVRGGKTG-D--DIPAAQID
VL1_HPV49 SLDIVNDICKYPDFLKMANDIYGDACFFYARREQCYARHFFVRGGNVG-D--AIPNTAVG
VL1_HPV09 SLDIVDETCKYPDFLTMANDVYGDACFFFARREQCYARHYYVRGGSVG-D--AVPDGAVN
VL1_HPV15 SLDIVNETCKYPDFLTMANDVYGDACFFFARREQCYARHYFVRGGAVG-D--ALPDAAVN
VL1_HPV17 SLDIVNETCKYPDFLSMANDVYGDACFFFARREQCYARHYFVRGGNVG-D--AVPDGSVN
VL1_HPV37 SLDIVNEICKYPDFLTMANDVYGDACFFFARREQCYARHYFVRGGNVG-D--AIPDGTVN
VL1_HPV38 SLDIVNETCKYPDFLTMSNDVYGDSCFFFVRREQCYARHYFVRGGAVG-D--AIPDGTVN
VL1_HPV22 SLDIVNEICKYPDFLTMSNDVYGDSCFFCARREQCYARHNFVRGGLVG-D--AIPDDAVQ
VL1_HPV23 SLDLVNEVCKYPDFLTMSNDVYGDACFFCARREQCYARHYFVRGGVVG-D--AIPDGAVQ
VL1_HPV48 PLELIDSISIWPDFLKMTKDIYGDSVFFFGKREQCYARHLFARAGQMG-E--PIPT----
VL1_HPV50 PLDIVDSISLWPDLLKMTKDVYGDHVFFYAKQEQLYARHLFTHAGPIG-E--PIPNVS--
VL1_HPV60 PLDITNEICKYPDLLKMTKDIYGDAVFFFGKREQIYSRHYFVRGGIDG-D--SLPDS---
VL1_HPV04 PLDVIATVCKWPDFLKMGKDIYGDSLFFFGRREQLYARHFFVRAGTMG-D--ALPEPFEA
VL1_HPV65 PLDVVATMCKWPDFLKMSKDVYGDSLFFYGRREQLYARHFFVRAGAMG-D--ALPEPFEV
VL1_HPV41 PLDIVDSICKYPDYLQMIEELYGDHMFFYVRREALYARHIMQHAGKMDAE--QFPT----
VL1_CRPVK PLELAQSISKYPDYLKMQKDQFGDSMFFYARREQMYARHFFSRAGGDK-E--NVKS----
VL1_COPV6 PIDIVNSACKYPDYLKMANEPYGDRCFFFVRREQLYARHIMSRSGTQGLE--PVPK----
VL1_HPV1 PLDVVQATCKYPDYIRMNHEAYGNSMFFFARREQMYTRHFFTRGGSVG-DKEAVPQ----
VL1_HPV63 PLDIAGTVCKYPDYIKMGQEVHGNSLFFFARREQMYLRHVFTHAGIVS-EKEKVPT----
.::: :** : * : *: :* ..* : ** :
VL1_BPV5 ------DMTLPQQVPDN-----KDTSFTFMGTPSGSLVSTDGQLFNRPYWLYQAQGLNNG
VL1_BPV1 ------DFYLKNNKGDAT----LKIPSVHFGSPSGSLVSTDNQIFNRPYWLFRAQGMNNG
VL1_BPV2 ------DFYLKNGRGEET----LKIPSVHFGSPSGSLVSTDNQIFNRPYWLFRAQGMNNG
VL1_PAPVD ------AYYLKPPGEME-----LKMPSVFFASPSGSLVSTDGQLFNRPYWILRAQGMNNG
VL1_PAPVE ------AYFLKPKGGDQT----QKMPSILFGVPSGSLVSTDGQLFNRPYWLFRAQGMNNG
VL1_HPV43 ------DMYIAGSNTRS-----KIADSIYFSTPSGSLVTSDSQLFNKPLWIQKAQGHNNG
VL1_HPV40 ------DLYITGTSGRT-----PIAGSIYYSTPSGSLVTSDSQIFNKPLWIQKAQGHNNG
VL1_HPV07 ------DLYITGSSNRA-----SIAGSIYYSTPSGSLVTSDSQIFNKPLWIQKAQGHNNG
VL1_HPV11 ------DLLVKGGNNRS-----SVASSIYVHTPSGSLVSSEAQLFNKPYWLQKAQGHNNG
VL1_HPV6A ------TLIIKGSGNRT-----SVGSSIYVNTPSGSLVSSEAQLFNKPYWLQKAQGHNNG
VL1_HPV6B ------TLIIKGSGNRT-----SVGSSIYVNTPSGSLVSSEAQLFNKPYWLQKAQGHNNG
VL1_HPV44 ------DLVIKSASKN------TVPNAIYFNTPSGSLVSSETQLFNKPFWLQKAQGHNNG
VL1_HPV55 ------DLVFKGATKS------TVPNAIYFNTPSGSLVSSETQLFNKPFWLQRAQGHNNG
VL1_HPV13 ------ELYVKGSN--------TLSNSIYYNTPSGSLVSSEAQLFNKPYWLQKAQGHNNG
VL1_PCPV1 ------DLLVKGTTSRA-----TVSSTIYFNTPSGSLVSSEAQLFNKPYWLHKAQGHNNG
VL1_HPV34 ------DLMIKGTGNTA-----SPSSCVFYPTPSGSMVSSDAQIFNKPYWLQKAQGQNNG
VL1_HPV32 ------DMYIKASNGASGRN--NLASSIYYPTPSGSMVTSDAQIFNKPYWLQQAQGHNNG
VL1_HPV42 ------ELYTKAANNASGRH--NLGSSIYYPTPSGSMVTSDAQLFNKPYWLQQAQGHNNG
VL1_HPV54 ------DLYIKKSSG-------NLDSSIYAATPSGSMVTSEYQIFNKPYWLQRAQGQNNG
VL1_RHPV1 ------DLYIKGSGSNV-----KLASHVFYPTPSGSMVTSDAQLFNKPYWLQKAQGHNNG
VL1_HPV52 ------DLYIQGSNSGNTA---TVQSSAFFPTPSGSMVTSESQLFNKPYWLQRAQGHNNG
VL1_HPV67 ------DLYFKGSANTS-----ALQTSAFFPTPSGSMVSSESQLFNKPYWLQRAQGHNNG
VL1_HPV33 ------DLYIKGSGTTA-----SIQSSAFFPTPSGSMVTSESQLFNKPYWLQRAQGHNNG
VL1_HPV58 ------DLYIKGSGNTA-----VIQSSAFFPTPSGSIVTSESQLFNKPYWLQRAQGHNNG
VL1_HPV35 ------DLYIKGTTG-------TLPSTSYFPTPSGSMVTSDAQIFNKPYWLQRAQGHNNG
VL1_HPV31 ------DLYIKGSGSTA-----TLANSTYFPTPSGSMVTSDAQIFNKPYWMQRAQGHNNG
VL1_HPV16 ------DLYIKGSGSTA-----NLASSNYFPTPSGSMVTSDAQIFNKPYWLQRAQGHNNG
VL1_HPV70 ------ELYIKGTDIRE-----RPGTHVYSPSPSGSMVSSDSQLFNKPYWLHKAQGHNNG
VL1_HPV39 ------QLYIKGTDIRA-----NPGSSVYCPSPSGSMVTSDSQLFNKPYWLHKAQGHNNG
VL1_HPV68 ------DMYIKGTDIRE-----TPSSYVYAPSPSGSMVSSDSQLFNKPYWLHKAQGHNNG
VL1_HPVME ------ELYIKGTDIRD-----SPSSYVYAPSPSGSMVSSDSQLFNKPYWLHKAQGHNNG
VL1_HPV18 ------SLYIKGTGMPA-----SPGSCVYSPSPSGSIVTSDSQLFNKPYWLHKAQGHNNG
VL1_HPV45 ------DLYIKGTSANMRE---TPGSCVYSPSPSGSIITSDSQLFNKPYWLHKAQGHNNG
VL1_HPV51 ------DYYIKGSGNGRD----PIESYIYSATPSGSMITSDSQIFNKPYWLHRAQGHNNG
VL1_HPV82 ------KAYIKGTGAGRD----PISSYIYSATPSGSMITSDSQIFNKPYWLHRAQGHNNG
VL1_HPV26 ------TLYIKGAESGRE----PPTSSIYSATPSGSMVTSDAQLFNKPYWLQRAQGHNNG
VL1_HPV69 ------SMYIKGAGQGRE----PPTTSIYSRTPSGSMVTSDAQLFNKPYWLQRAQGHNNG
VL1_HPV2A ------ELYIKSTSVP------TPGSHVYTSTPSGSMVSSEQQLFNKPYWLRRAQGHNNG
VL1_HPV57 ------ELYVKSSTVQ------TPGSYVYTSTPSGSMVSSEQQLFNKPYWLRRAQGHNNG
VL1_HPV61 ------SYYLKGANDKA-----APGSYIYSPTPSGSMVSSDSQLFNKPYWLQRAQGHNNG
VL1_HPV62 ------DLYMKGTPGSDRQ---MPGSYIYAPTPSGSMVSSDSQLFNKPYWLQRAQGHNNG
VL1_HPV29 ------SLYLKGNNGRE-----TPGSAIYSPTPSGSMVTSEAQIFNKPYWLQQAQGHNNG
VL1_HPV10 ------TFILKSNGGGR-----DVGSAVYSPTPSGSMVTSEAQLFNKPYWLRRAQGHNNG
VL1_HPV28 ------TLYIKGQGNGRD----VIGSAVYSPTPSGSMISSEAQLFNKPYWLRRAQGHNNG
VL1_HPV03 ------ALYIKGDSQSGGRD--KIGSAVYCPTPSGSMVTSETQLFNKPYWLRRAQGHNNG
VL1_HPV56 ------ELYLKGSNGRE-----PPPSSVYVATPSGSMITSEAQLFNKPYWLQRAQGHNNG
VL1_HPV66 ------DLYWKGGNGRD-----PPPSSVYVATPSGSMITSEAQLFNKPYWLQRAQGHNNG
VL1_HPV30 ------TLYIKGTNNRD-----PPPSSVYVATPSGSMVTSEAQLFNKPYWLQRAQGHNNG
VL1_HPV53 ------DLYIKGSNGRD-----PPPSSVYVATPSGSMITSEAQLFNKPYWLQRAQGHNNG
VL1_BPV3 S-----PYYLPGAGRA------TLPTSVYFGSPSGSLVSSDQQIYNRPFWIQRAQGRNNG
VL1_BPV4 S-----PYFLPATGRG------PLPSSVYIGSPSGSLVSSDQQIYNRPFWIQRAQGSNNG
VL1_HPV24 AGTYKNDFYIPAATGQTQK---NIGNSMYFPTVSGSLVSSDAQLFNRPFWLQRAQGHNNG
VL1_HPV19 EGSMKNTYYIPPNNSQQQYT--NLGNAMYFPTVSGSLVSSDAQLFNRPFWLQRAQGHNNG
VL1_HPV25 EGSMKNAFYIPPNSSQAQYN--NLGNSMYFPTVSGSLVSSDAQLFNRPFWLQRAQGHNNG
VL1_HPV21 EGSMKNAYYIPPMNDQAQY---KIGNSMYFPTVSGSLVSSDAQLFNRPFWLQRAQGHNNG
VL1_HPV14 EGSLKNVYYIPPMTNQPQN---NIGNAMYFPTVSGSLVSSDAQLFNRPFWLQRAQGHNNG
VL1_HPV20 EGSMKNAFYIPPVNNQAQN---NLGNSMYFPTVSGSLVSSDAQLFNRPFWLQRAQGHNNG
VL1_HPV47 NGNMKNQFYIPGATGQAQS---TIGNAMYFPTVSGSLVSSDAQLFNRPFWLQRAQGHNNG
VL1_HPV36 NGTFKNQFFIPGADGQDQK---TIGNAMYYPTVSGSLVSSDAQLFNRPFWLQRAQGHNNG
VL1_HPV05 NGTYKNQFYIPGADGQAQK---TIGNSMYFPTVSGSLVSSDAQLFNRPFWLQRAQGHNNG
VL1_HPV5B NGTYKNQFYIPGADGQAQK---TIGNAMYFPTVSGSLVSSDAQLFNRPFWLQRAQGHNNG
VL1_HPV12 DGNMKNQYYIPGAQDQSQK---DIGNAMYFPTVSGSLVSSDAQLFNRPFWLQRAQGHNNG
VL1_HPV08 DGMMKNQYYIPGGQDQSQK---DIGNAMYFPTVSGSLVSSDAQLFNRPFWLQRAQGHNNG
VL1_HPV49 Q---DNNYILPAASQQAQN---TLGSSIYFPTVSGSLVSTDAQLFNRPFWLQRAQGHNNG
VL1_HPV09 Q---DHNFFLPAKSDQQQR---TIANSTYYPTVSGSLVTSDAQLFNRPFWLQRAQGHNNG
VL1_HPV15 Q---DHNFYLPAQSTQQQN---NLANSTYFPTVSGSLVTSDAQLFNRPFWLRRAQGHNNG
VL1_HPV17 Q---DHKFYLPAQTGQQQR---TLGNSTYFPTVSGSLVTSDAQLFNRPFWLRRAQGHNNG
VL1_HPV37 Q---DHKYYLPAKSDQQQY---LLGNSTYFPTVSGSLVTSDAQLFNRPFWLRRAQGHNNG
VL1_HPV38 Q---NHNYYLPAKNGQGQR---TLGNSTYFPTVSGSLVTSDAQLFNRPFWLQRAQGHNNG
VL1_HPV22 QDH---KYYLPAASQT------ALENSTYFPTVSGSLVTSDAQLFNRPFWLKRAQGHNNG
VL1_HPV23 QDH---KYYLPADQQN------TLENSLYFPTVSGSLVTSDSQLFNRPFWLKRAQGHNNG
VL1_HPV48 ---ENGVYYITPDSADQNNRSSHLGSSVYFTTPSGSLNTSDSQLFNRPYWLRRAQGTNNG
VL1_HPV50 ----GVYNYAVNPNQPEQNRRTNIGSYLYFTTPSGSLNTSSSQLFNRPYWIRRAQGTNNC
VL1_HPV60 ------GYYLAPQTDKPQN---NLGGYSYFPTPSGSVASSDNQLFNRPYWLHRAQGANNG
VL1_HPV04 TS----DYFIGAQNQQDQY---TLGPHIYVGTPSGSLVSSESQLFNRPYWLNRAQGTNNG
VL1_HPV65 ----KTDYWIPAQEGQDQN---TLGPHIYIGTPSGSLVSSESQLFNRPYWLNRAQGTNNG
VL1_HPV41 ------SLYIDSSVEGEKLNS-LQRTDRYFMTPSGSLVATEQQLFNRPFWLQRSQGHNNG
VL1_CRPVK ------RAYIKRTQMQGEANA-NIATDNYCITPSGSLVSSDSQVFNRAYWLQKAQGMNNG
VL1_COPV6 ------DTYATREDN-------NIGTTNYFSTPSGSLVSSEGQLFNRPYWIQRSQGKNNG
VL1_HPV1 ------SLYLTADAEPRT----TLATTNYVGTPSGSMVSSDVQLFNRSYWLQRCQGQNNG
VL1_HPV63 ------SAYIAAKAEQPQN---TIATDNYFVAPSGSLVSSDVQIFNRPYWLQRSQGQNNG
***: ::. *::*.. *: ..** **
VL1_BPV5 VCWDNELFITVGDNSRGGVFTISVPVD-DRK-------PEQYNSANMNIYCRHVEEYKLA
VL1_BPV1 IAWNNLLFLTVGDNTRGTNLTISVASD-GTP-------LTEYDSSKFNVYHRHMEEYKLA
VL1_BPV2 IAWNNLLFLTVGDNTRGTNLSISVAAD-GNA-------LSEYDTGKFNLYHRHMEEYKLA
VL1_PAPVD VCWNNTLFVTVGDNTRGSTLTITVPNN-DEP-------LTEYDTSKFNVYQRHVEEFKLA
VL1_PAPVE ICWLNQLFVTVGDNTRGTTLTITVPTS-GSP-------LTEYDTSKFNVFQRHVEEYKLA
VL1_HPV43 ICFGNQLFVTVVDTTRSTNLTLCASTD-PTV-------PSTYDNAKFKEYLRHVEEYDLQ
VL1_HPV40 ICFGNQLFVTVVDTTRSTNLTLCAATQ-SPT-------PTPYNNSNFKEYLRHGEEFDLQ
VL1_HPV07 ICFGNQLFVTVVDTTRSTNLTLCAATQ-SPT-------PTPYDNSKFKEYLRHGEEFDLQ
VL1_HPV11 ICWGNHLFVTVVDTTRSTNMTLCASVS-KS---------ATYTNSDYKEYMRHVEEFDLQ
VL1_HPV6A ICWGNQLFVTVVDTTRSTNMTLCASVT-TS---------STYTNSDYKEYMRHVEEYDLQ
VL1_HPV6B ICWGNQLFVTVVDTTRSTNMTLCASVT-TS---------STYTNSDYKEYMRHVEEYDLQ
VL1_HPV44 ICWGNQLFVTVVDTTRSTNMTICAATT-QSP-------PSTYTSEQYKQYMRHVEEFDLQ
VL1_HPV55 ICWGNQLFVTVVDTTRSTNMTICAATT-QSP-------STTYNSTEYKQYMRHVEEFDLQ
VL1_HPV13 ICWGNHLFVTVVDTTRSTNMTVCAATT-SSL-------SDTYKATEYKQYMRHVEEFDLQ
VL1_PCPV1 ICWGNTLFVTVVDTTRSTNMTVCASTT-SSP-------SATYTASEYKQYMRHVEEFDLQ
VL1_HPV34 ICWHNQLFLTVVDTTRSTNFSVCVGTQSTST-------TAPYANSNFKEYLRHAEEYDLQ
VL1_HPV32 ICWGNQVFLTVVDTTRSTNMTVCATVT-TED---------TYKSTNFKEYLRHAEEYDIQ
VL1_HPV42 ICWGNQLFLTVVDTTRSTNMTLCATAT-SGD---------TYTAANFKEYLRHAEEYDVQ
VL1_HPV54 ICWGNQVFLTVVDTTRSTNLTLCATAS-TQD---------SFNNSDFREYIRHVEEYDLQ
VL1_RHPV1 ICWGNQVFLTVVDTTRSTNMTLCASTA-STV-------TTPYNNESFKEYLRHVEEFDLQ
VL1_HPV52 ICWGNQLFVTVVDTTRSTNMTLCAEVK----------KESTYKNENFKEYLRHGEEFDLQ
VL1_HPV67 ICWGNQIFVTVVDTTRSTNMTLCSEEK-SEA---------TYKNENFKEYLRHVEEYDLQ
VL1_HPV33 ICWGNQVFVTVVDTTRSTNMTLCTQVT-SDS---------TYKNENFKEYIRHVEEYDLQ
VL1_HPV58 ICWGNQLFVTVVDTTRSTNMTLCTEVTKEGT----------YKNDNFKEYVRHVEEYDLQ
VL1_HPV35 ICWSNQLFVTVVDTTRSTNMSVCSAVS-SSD--------STYKNDNFKEYLRHGEEYDLQ
VL1_HPV31 ICWGNQLFVTVVDTTRSTNMSVCAAIA-NSD--------TTFKSSNFKEYLRHGEEFDLQ
VL1_HPV16 ICWGNQLFVTVVDTTRSTNMSLCAAIS-TSE--------TTYKNTNFKEYLRHGEEYDLQ
VL1_HPV70 ICWHNQLFITVVDTTRSTNFTLSACTE-TAI-------PAVYSPTKFKEYTRHVEEYDLQ
VL1_HPV39 ICWHNQLFLTVVDTTRSTNFTLSTSIE-SSI-------PSTYDPSKFKEYTRHVEEYDLQ
VL1_HPV68 ICWHNQLFLTVVDTTRSTNFTLSTTTD-STV-------PAVYDSNKFKEYVRHVEEYDLQ
VL1_HPVME ICWHNQLFLTVVDTTRSTNFTLSTTTE-SAV-------PNIYDPNKFKEYIRHVEEYDLQ
VL1_HPV18 VCWHNQLFVTVVDTTPSTNLTICASTQ-SPV-------PGQYDATKFKQYSRHVEEYDLQ
VL1_HPV45 ICWHNQLFVTVVDTTRSTNLTLCASTQ-NPV-------PSTYDPTKFKQYSRHVEEYDLQ
VL1_HPV51 ICWNNQLFITCVDTTRSTNLTISTA-T-AAV-------SPTFTPSNFKQYIRHGEEYELQ
VL1_HPV82 ICWNNQLFITCVDTTKSTNLTISTAVT-PSV-------AQTFTPANFKQYIRHGEEYELQ
VL1_HPV26 ICWGNQLFVTCVDTTRSTNLTISTLSA-ASA-------STPFKPSDYKQFIRHGEEYELQ
VL1_HPV69 ICWGNQLFVTCVDTTRSTNLTISTVSA-QSA-------SATFKPSDYKQFIRHGEEYELQ
VL1_HPV2A MCWGNRVFLTVVDTTRSTNVSLCATEA-SD---------TNYKATNFKEYLRHMEEYDLQ
VL1_HPV57 MCWGNRIFLTVVDTTRSTNVSLCATVT-TE---------TNYKASNYKEYLRHMEEYDLQ
VL1_HPV61 ICWFNELFVTVVDTTRSTNLTICTATS-PPV--------SEYKATSFREYLRHTEEFDLQ
VL1_HPV62 ICWFNELFVTVVDTTRSTNFTICTAST-AA---------AEYKATNFREFLRHTEEFDLQ
VL1_HPV29 ICWANQVFLTVVDTTRSTNMSLCATTE-SQP-------LTTYDATKIKEYLRHGEEYDLQ
VL1_HPV10 ICWANQLFVTVVDTTRSTNMCLCVPSE-ASP-------ATTYDATKFKEYLRHGEEYDLQ
VL1_HPV28 ICWANQLFVTVVDTTRSTNMTLCVSTD-SS---------ATYDASKFKEYLRHGEEYDLQ
VL1_HPV03 ICWANQLFVTVVDTTRSTNMTLCVSTE-TS---------ATYDATKFKEYLRHGEEYDLQ
VL1_HPV56 ICWGNQLFVTVVDTTRSTNMTISTATE-QL---------SKYDARKINQYLRHVEEYELQ
VL1_HPV66 ICWGNQVFVTVVDTTRSTNMTINAAKS-TL---------TKYDAREINQYLRHVEEYELQ
VL1_HPV30 ICWGNQVFVTVVDTTRNTNMTISATTQ-TL---------STYNSSQIKQYVRHVEEYELQ
VL1_HPV53 ICWNNQLFVTVVDTTRNTNMTLSATTQ-SM---------STYNSKQIKQYVRHAEEYELQ
VL1_BPV3 ICWNNQLFVTAVDSTRGTNFTISVHRD-KPS----LEDQDTYTAAEFKHYLRHVEEWEVS
VL1_BPV4 MCWNNELFVTAVDSTRGTNFSISVHTT-DPE----VKPQETYTATKFKHYLRHVEEWDLS
VL1_HPV24 ICWANQLFITVVDNTRNTNFSISVYTE-NGK----VTDINEYDANKFREYQRHVEEYEIS
VL1_HPV19 ICWFNQLFVTVVDNTRNTNFSISVNSD-GTD----VAKIADYNSANFKEYLRHVEEYEIS
VL1_HPV25 ICWFNQLFVTVVDNTRNTNFSISINSD-GTD----VSKITDYNSQKFTEYLRHVEEYELS
VL1_HPV21 ICWFNQLFVTVVDNTRNTNFSISVNPE-NAD----VSKIENYKAESFQEYLRHVEEYELS
VL1_HPV14 ICWFNQLFVTVVDNTRNTNFSISVSSE-NTE----VSKIDNYTSQKFQEYLRHVEEYEMS
VL1_HPV20 ICWFNQLFVTVVDNTRNTNFSISVHSE-NTD----VSKIQNYDSQKFQEYLRHVEEYEIS
VL1_HPV47 ILWANQMFVTVVDNTRNTNFSISVYSQ-AGD----IKDIQDYNADNFREYQRHVEEYEIS
VL1_HPV36 ILWANQMFITVVDNTRNTNFSISIYNN-NGA----LKDINDYTAEQFREYQRHVEEYEIS
VL1_HPV05 ILWANQMFITVVDNTRNTNFSISVYNQ-AGA----LKDVADYNADQFREYQRHVEEYEIS
VL1_HPV5B ILWANQMFITVVDNTRNTNFSISVYNQ-AGP----LKDVADYNAEQFREYQRHVEEYEIS
VL1_HPV12 ILWANQMFVTVVDNTRNTNFSISIYSD-NQN----VHDIPNYDSQKFREYLRHVEEYEIS
VL1_HPV08 ILWANQMFVTVVDNTRNTNFSISVYTE-NGE----LKNITDYKSTQFREYLRHVEEYEIS
VL1_HPV49 ICWENQLFITVADNTRNTNFTISVSTD-GQT-------PTEYDSTKVREFLRHVEEYEIS
VL1_HPV09 ILWGNQIFVTVADNTRNTNFTISVSTE-AAQ-------TEEYNANNIREYLRHVEEYQIS
VL1_HPV15 ILWGNQMFITVADNTRNTNFTISVTSD-GNA-------INEYNSQNIREFLRHVEEYQLS
VL1_HPV17 ILWGNQIFVTVADNTRNTNFSISVSTE-AGA-------VTEYNSQNIREYLRHVEEYQLS
VL1_HPV37 ILWGNQMFITVADNTRNTNFSISVSTD-NGE-------VTEYNSQTLREYLRHVEEYQLS
VL1_HPV38 ILWGNQMFVTVADNTRNTNFTISVSTE-NGG-------AQEYDSANIREYLRHVEEYQLS
VL1_HPV22 ILWNNQMFVTVADNTRNTNFSISVASD-GTT--------VNYDAKKIREFMRHVEEYQLS
VL1_HPV23 ILWNNQMFVTVADNTRNTNFSISVTND-SSL--------EKYDATKIREFTRHVEEYQLS
VL1_HPV48 ICWGNELFITVFDNTHNVNFTISVKNDKTALTENYIDNGYKYNNADFKQYLRHTEEYEIE
VL1_HPV50 ICWGNEVFVTVFDNTRNINFNISVKKDVNPLDPLNVASSYMYSKDDFNQYSRHTEEYELE
VL1_HPV60 ICWGNQLFITIVDNTRNTNLSISVYKQ-DAA----IDNRYKYKQEDFRQYLRHTEEYEVE
VL1_HPV04 ICWDNQLFVTLVDNTHNTNFTISVKSDGAND-------NYQYKASDFKQYLRHIEEFEME
VL1_HPV65 ICWDNQLFVTLVDNTHNTNFTISVKTEAADE-------SYKYKAGDFKQYLRHIEEFEME
VL1_HPV41 ILWHNEAFVTLVDTTRGTNFTISVP---EGD-------ASSYNNSKFFEFLRHTEEFQLA
VL1_CRPVK VCWDNQIFVTVVDNTRGTILSLVTKSKEQIK-------KTHGKTVHFSSYLRHVEEYELQ
VL1_COPV6 IAWGNQLFLTVVDNTRGTPLTINIGQQDKPE-------EGNYVPSSYRTYLRHVEEYEVS
VL1_HPV1 ICWRNQLFITVGDNTRGTSLSISMKNN-AST---------TYSNANFNDFLRHTEEFDLS
VL1_HPV63 ICWRNELFVTVADNTRGTTMNINVLNK-ATP--------ETYDSADYNEYTRHVEEYELS
: : * *:* *.: . . : : ** **:.:
VL1_BPV5 VILELCSVELTSETVAYLQTVNPSVLEKWEVGVNPPPATVLEDTYRYQ-ESKAIKCID--
VL1_BPV1 FILELCSVEITAQTVSHLQGLMPSVLENWEIGVQPPTSSILEDTYRYI-ESPATKCAS-N
VL1_BPV2 FILELCSVEITAQTLSHLQGLMPSVLQNWEIGVQPPASSILEDTYRYI-ESPATKCASNV
VL1_PAPVD FILELCSVELTPETVSSLQGSMPSILENWEINLQPPTSSVLEDIYRFI-DSPATKCAD-N
VL1_PAPVE FVFQLCSVTLSPETVSHLQGLMPSILEHWDINMQPPTSSILEDTYRYL-ESPATKCAD-N
VL1_HPV43 FIFQLCIITLNPEVMTYIHTMDPTLLEDWNFGVSPPASASLEDTYRFL-SNKAIACQK-N
VL1_HPV40 FIFQLCVITLNAEVMTYIHAMDPTLLEDWNFKIAPPASASLEDTYRFL-TNKAIACQR-D
VL1_HPV07 FIFQLCVITLNAEVMTYIHAMDSSLLDDWNFKIGPPASATLEDTYRFL-TNKAIACQR-D
VL1_HPV11 FIFQLCSITLSAEVMAYIHTMNPSVLEDWNFGLSPPPNGTLEDTYRYV-QSQAITCQK-P
VL1_HPV6A FIFQLCSITLSAEVMAYIHTMNPSVLEDWNFGLSPPPNGTLEDTYRYV-QSQAITCQK-P
VL1_HPV6B FIFQLCSITLSAEVMAYIHTMNPSVLEDWNFGLSPPPNGTLEDTYRYV-QSQAITCQK-P
VL1_HPV44 FMFQLCSITLTAEVMAYLHTMNAGILEQWNFGLSPPPNGTLEDKYRYV-QSQAITCQK-P
VL1_HPV55 FMFQLCSITLTAEVMAYLHTMNPGILEQWNFGLSPPPNGTLEDKYRYV-QSQAITCQK-P
VL1_HPV13 FIFQLCTIKLTAEVMSYIHTMNPTILEDWNFGLSPPPNGTLEDTYRYV-QSQAITCQK-P
VL1_PCPV1 FIFQLCSIKLTAEVMAYIHTMNPTVLEEWNFGLSPPPNGTLEDTYRYV-QSQAITCQK-P
VL1_HPV34 FVFQLCKINLTTDVMTYIHSMSSSILEQWNFGLTPPPSGTLEETYRYV-TSQAITCQR-P
VL1_HPV32 FIFQLCKITLSVEVMSYIHTMNPDILDDWNVGVAPPPSGTLEDSYRFV-QSQAIRCQA-K
VL1_HPV42 FIFQLCKITLTVEVMSYIHNMNPNILEEWNVGVAPPPSGTLEDSYRYV-QSEAIRCQA-K
VL1_HPV54 FIFQLCTITLTADVMAYIHGMNPTILEDWNFGITPPATSSLEDTYRFV-QSQAIACQKNN
VL1_RHPV1 FIFQLCKVTLNTEVMAYIHSMDASILEDWNFGLQPPPSGSLQDTYRFV-TSAAITCQK-P
VL1_HPV52 FIFQLCKITLTADVMTYIHKMDATILEDWQFGLTPPPSASLEDTYRFV-TSTAITCQK-N
VL1_HPV67 FIFQLCKISLTANVMQYIHTMNPDILEDWQFGLTPPPSGNLQDTYRFV-TSQAITCQK-T
VL1_HPV33 FVFQLCKVTLTAEVMTYIHAMNPDILEDWQFGLTPPPSASLQDTYRFV-TSQAITCQK-T
VL1_HPV58 FVFQLCKITLTAEIMTYIHTMDSNILEDWQFGLTPPPSASLQDTYRFV-TSQAITCQK-T
VL1_HPV35 FIFQLCKITLTADVMTYIHSMNPSILEDWNFGLTPPPSGTLEDTYRYV-TSQAVTCQK-P
VL1_HPV31 FIFQLCKITLSADIMTYIHSMNPAILEDWNFGLTTPPSGSLEDTYRFV-TSQAITCQK-T
VL1_HPV16 FIFQLCKITLTADVMTYIHSMNSTILEDWNFGLQPPPGGTLEDTYRFV-TSQAIACQK-H
VL1_HPV70 FIFQLCTITLTADVMAYIHTMNPAILDNWNIGVTPPPSASLVDTYRYL-QSAAIACQK-D
VL1_HPV39 FIFQLCTVTLTTDVMSYIHTMNSSILDNWNFAVAPPPSASLVDTYRYL-QSAAITCQK-D
VL1_HPV68 FIFQLCTITLSTDVMSYIHTMNPAILDDWNFGVAPPPSASLVDTYRYL-QSAAITCQK-D
VL1_HPVME FIFQLCTITLSTDVMSYIHTMNPAILDDWNFGVAPPPSASLVDTYRYL-QSAAITCQK-D
VL1_HPV18 FIFQLCTITLTADVMSYIHSMNSSILEDWNFGVPPPPTTSLVDTYRFV-QSVAITCQK-D
VL1_HPV45 FIFQLCTITLTAEVMSYIHSMNSSILENWNFGVPPPPTTSLVDTYRFV-QSVAVTCQK-D
VL1_HPV51 FIFQLCKITLTTEVMAYLHTMDPTILEQWNFGLTLPPSASLEDAYRFV-RNAATSCQK-D
VL1_HPV82 FIFQLCKITLTTEIMAYLHTMDSTILEQWNFGLTLPPSASLEDAYRFV-KNAATSCHK-D
VL1_HPV26 FIFQLCKITLTTDVMAYIHLMNASILEDWNFGLTLPPTASLEDAYRFI-KNSATTCQR-N
VL1_HPV69 FIFQLCKITLTTDVMAYIHTMNSTILENWNFGLTLPPTASLEDAYRFI-KNSATTCQR-D
VL1_HPV2A FIFQLCKITLTPEIMAYIHNMDPQLLEDWNFGVPPPPSASLQDTYRYL-QSQAITCQK-P
VL1_HPV57 FIFQLCKITLTPEIMAYIHNMDARLLEDWNFGVPPPPSASLQDTYRYL-QSQAITCQK-P
VL1_HPV61 FIFQLCKIHLTPEIMAYLHNMNKALLDDWNFGVVPPPSTSLEDTYRFL-QSRAITCQKGA
VL1_HPV62 FIFQLCKIQLTPEIMAYLHNMNKDLLDDWNFGVLPPPSTSLDETYHYL-QSRAITCQKGA
VL1_HPV29 FIFQLCKVTLTPEIMAYLHTMNSALLEDWNFGLTLPPSTSLEDTYRFV-TSSAITCQK-D
VL1_HPV10 FIFQLCKVTLTPDIMAYLHTMNSSLLEDWNFGLTLPPSTSLEDTYRFL-SSSAITCQK-D
VL1_HPV28 FIFQLCKVTLTPDIMAYLHTMNNSLLEDWNFGLTLPPSTSLEDTYRFI-SSSAITCQK-D
VL1_HPV03 FIFQLCKVTLTPEIMAYLHTMNSTLLEDWNFGLTLPPSTSLEDTYRFL-TSSAITCQK-D
VL1_HPV56 FVFQLCKITLSAEVMAYLHNMNANLLEDWNIGLSPPVATSLEDKYRYV-RSTAITCQR-E
VL1_HPV66 FVFQLCKITLTAEVMAYLHNMNNTLLDDWNIGLSPPVATSLEDKYRYI-KSTAITCQR-E
VL1_HPV30 FVFQLCKISLSAETMAYLHTMNSTLLEGWNIGLSPPAATSLEDKYRYV-KSLAITCQK-D
VL1_HPV53 FVFQLCKISLSAEVMAYLHTMNSTLLEDWNIGLSPPVATSLEDKYRYV-KSAAITCQK-D
VL1_BPV3 LVLQLCIVDLTPEALAHINGMDPRIIESWNLGFIHAPNN-IEDQYRYL-QSIATRCPP-K
VL1_BPV4 LIMQLCIVNLTPESIAYLHNMNESIIENWNLGFIQPPND-IEDHYRFI-TSLATRCPK-K
VL1_HPV24 LILQLCKIPLKADVLAQINAMNPSLLEEWQLGFVPAPDNPLQSTYRYI-ESLATPCPD-K
VL1_HPV19 LILQLCKIPLKAEVLAQINAMNSNILEEWQLGFVPAPDNPIQDTYRYI-DSLATRCPD-K
VL1_HPV25 LILQLCKVPLKAEILAQINAMNSNILEEWQLGFVPAPDNSIQDTYRYI-DSLATRCPD-K
VL1_HPV21 LILQLCKVPLTAEVLAQINAMNANILEEWQLGFVPAPDNPIHDTYRYI-DSAATRCPD-K
VL1_HPV14 LILQLCKIPLTAEVLAQINAMNSNILEEWQLGFVPAPDNPIHDTYRYI-ESAATRCPD-K
VL1_HPV20 LILQLCKVPLTAEVLAQINAMNSNILEEWQLGFVPAPDNPIHDTYRYI-NSAATRCPD-K
VL1_HPV47 VILQLCKVPLKAEVLAQINAMNSSLLEEWQLGFVPTPDNPIQDTYRYL-ESLATRCPE-K
VL1_HPV36 LILQLCKVPLKAEVLAQINAMNSSLLEDWQLGFVPTPDNPIQDTYRYI-DSLATRCPD-K
VL1_HPV05 LILQLCKVPLKAQVLAQINAMNSSLLEDWQLGFVPTPDNPIQDTYRYI-DSLATRCPD-K
VL1_HPV5B LILQLCKVPLKAEVLAQINAMNSSLLEDWQLGFVPTPDNPIQDTYRYI-DSLATRCPD-K
VL1_HPV12 LILQLCKVPLKAEVLAQINAMNSSLLEDWQLGFVPTPDNPIHDTYRYI-ESLATRCPD-K
VL1_HPV08 LILQLCKIPLKADVLAQINAMNSSLLEEWQLGFVPTPDTPIHDTYRYI-DSLATRCPD-K
VL1_HPV49 IILQLCKVPLEPEVLAQINAMNSSILENWQLGFVPTPDNPIHDTYRYL-TSQATRCPD-K
VL1_HPV09 LILQLCKVPLVAEVLSQINAMNSGILEDWQLGFVPTPENAVHDIYRYI-DSKATKCPD-A
VL1_HPV15 IILQLCKIPLKAEVLTQINAMNSGILEDWQLGFVPTPDNAVQDIYRYI-DSKATKCPD-A
VL1_HPV17 FILQLCKIPLKAEVLTQINAMNSGILEDWQLGFVPTPDNPVHDIYRYI-NSKATKCPD-A
VL1_HPV37 IILQLCKVPLKAEVLTQINAMNSGILEEWQLGFVPTPDNSVHDLYRYI-NSKATKCPD-A
VL1_HPV38 FILQLCKVPLNAEVLTQINAMNSGILENWQLGFVPTPDNSVHDTYRYI-TSKATKCPD-A
VL1_HPV22 FILQLCRIPLEAEVLTQINAMNHGILENWQLGFVPTPDNSVHDTYRYL-QSKATKCPD-A
VL1_HPV23 FILQLCRIPLKAEVLTQINAMNSDILENWQLGFVPTPDNAVHDTYRYL-ASKATKCPD-A
VL1_HPV48 LVFQLCKVNLTADVLAHLHVMNPRILEEWQLAFVPPAPTGIEDTYRYI-KSMATKCPT--
VL1_HPV50 FIFQLCKVGLDADILAHLNVMDPRILENWQLAYVPPAPSGIGDTYRYL-KSDATKCPA-K
VL1_HPV60 LILRLCKVPLNPDVLAHLNVMDKNILEDWQLSFVPPPPQGIEDAYRYI-MSQATMCPT-D
VL1_HPV04 FIFQLCKVPLTADVMAHLNVMNPNILDNWQLNFVPPPPSGIEDQYRFL-QSRATRCPT-Q
VL1_HPV65 FIFQLCTVPLTADVMAHLNVMNPNILDNWQLNFVPPPPSGIEDQYRFI-QSRATRCPT-Q
VL1_HPV41 FILQLCKVDLTPENLAYIHTMDPSIIEDWHLAVTSPPNSVLEDHYRYI-LSIATKCPS-K
VL1_CRPVK FVLQLCKVKLTPENLSYLHSMHPTIIDNWQLSVSAQPSGTLEDQYRYL-QSIATKCPP-P
VL1_COPV6 IIVQLCKVKLSPENLAIIHTMDPNIIEDWHLNVT-PPSGTLDDTYRYI-NSLATKCPT-N
VL1_HPV1 FIVQLCKVKLTPENLAYIHTMDPNILEDWQLSVSQPPTNPLEDQYRFLGSSLAAKCPE-Q
VL1_HPV63 FIVQLCKVKLTPENLAFLHNMDPTIIDSWQLTVSQPPANAIEDKYRFI-ESLATKCPD-N
.:. ** : : : : :: ::: * . : . *.: . * *
VL1_BPV5 QTAAAKKDKYENLSFWNIDLREKLSADLDQYPLGRRFLAQNGITCSRKRLRPA-------
VL1_BPV1 VIP-AKEDPYAGFKFWNIDLKEKLSLDLDQFPLGRRFLAQQGAGCSTVRKRRI-------
VL1_BPV2 IPP--KEDPYAGLKFWSIDLKEKLSLDLDQFPLGRRFLAQQGAGCSTVRKRAV-------
VL1_PAPVD VSPSKPEDPYSAHKFWEVNLKEKLSLDLDQFPLGR-LVLQFDCRLDRLLPQKDHFTYPEK
VL1_PAPVE VTPMGPEDPYAGLKFWEVNLKERLSLDLDQFPLGRRFLAQQGLGCSTRKRVAP------V
VL1_HPV43 APPKEREDPYKKYTFWDINLTEKFSAQLTQFPLGRKFVMQAGLRPKPKLKTVK---RSAP
VL1_HPV40 APPKVREDPYKKYKFWDVNLTERFSSQLDQFPLGRKFLMQAGVRAGPRFKSRK-RPAPSS
VL1_HPV07 APPKEKEDPYKKYKFWEVNLTEKFSSQLDQFPLGRKFLMQAGLRTGPKFKSRK-RPAPTS
VL1_HPV11 TPEKEKQDPYKDMSFWEVNLKEKFSSELDQFPLGRKFLLQSGYRGRTSARTGI----KRP
VL1_HPV6A TPEKEKPDPYKNLSFWEVNLKEKFSSELDQYPLGRKFLLQSGYRGRSSIRTGV----KRP
VL1_HPV6B TPEKEKPDPYKNLSFWEVNLKEKFSSELDQYPLGRKFLLQSGYRGRSSIRTGV----KRP
VL1_HPV44 PPEKAKQDPYAKLSFWEVDLREKFSSELDQYPLGRKFLLQTGVQARSSVRVGR---KRPA
VL1_HPV55 PPEKAKQDPYAKLSFWEVDLREKFSSELDQYPLGRKFLLQTGVQARSSVRVGR--KRPAS
VL1_HPV13 TPDKEKQDPYAGLSFWEVNLKEKFSSELDQYPLGRKFLLQTGVQSRSPIRVGR----KRA
VL1_PCPV1 TPDKEKQDPYAGLSFWEVNLKEKFSSELDQYPLGRKFLLQTGVQTTSFARAGT----KRA
VL1_HPV34 QPPKETEDPYGKMTFWEVDLKEKFSAELDQFALGRKFLLQLGMRARPRLQASK-----RS
VL1_HPV32 VTAPEKKDPFSDYSFWEVNLSEKFSSDLDQFPLGRKFLLQAGLRARPKLTAVK---RTAS
VL1_HPV42 VTTPEKKDPYSDFWFWEVNLSEKFSTDLDQFPLGRKFLLQAGLRARPKLSVGK----RKA
VL1_HPV54 APAKEKEDPYSKFNFWTVDLKERFSSDLDQFPLGRKFLLQAGLRARPRLRPVK----RAA
VL1_RHPV1 APPKEKEDPLAKYTFWEVDLKEKFSADLDQFPLGRKFLLQAGMRARPTLRAPK----RTA
VL1_HPV52 TPPKGKEDPLKDYMFWEVDLKEKFSADLDQFPLGRKFLLQAGLQARPKLKRPA-------
VL1_HPV67 SPPTAKEDPLKKYSFWEINLKEKFSADLDQFPLGRKFLLQAGFTAKPKLKRSS-------
VL1_HPV33 VPPKEKEDPLGKYTFWEVDLKEKFSADLDQFPLGRKFLLQAGLKAKPKLKRAA-------
VL1_HPV58 APPKEKEDPLNKYTFWEVNLKEKFSADLDQFPLGRKFLLQSGLKAKPRLKRSA-------
VL1_HPV35 SAPKPKDDPLKNYTFWEVDLKEKFSADLDQFPLGRKFLLQAGLKARPNFRLGK---RAAP
VL1_HPV31 APQKPKEDPFKDYVFWEVNLKEKFSADLDQFPLGRKFLLQAGYRARPKFKAGK----RSA
VL1_HPV16 TPPAPKEDPLKKYTFWEVNLKEKFSADLDQFPLGRKFLLQAGLKAKPKFTLGKRKA--TP
VL1_HPV70 APTPEKKDPYDDLKFWNVDLKEKFSTELDQFPLGRKFLLQVGARRRPTIGPRK--RPASA
VL1_HPV39 APAPEKKDPYDGLKFWNVDLREKFSLELDQFPLGRKFLLQARVRRRPTIGPRK--RPAAS
VL1_HPV68 APAPVKKDPYDGLNFWNVDLKEKFSSELDQFPLGRKFLLQAGVRRRPTIGPRK---RTAT
VL1_HPVME APAPTKKDPYDGLNFWNVNLKEKFSSELDQFPLGRKFLLQAGVRRRPTIGPRK---RPAT
VL1_HPV18 AAPAENKDPYDKLKFWNVDLKEKFSLDLDQYPLGRKFLVQAGLRRKPTIGPRK---RSAP
VL1_HPV45 TTPPEKQDPYDKLKFWTVDLKEKFSSDLDQYPLGRKFLVQAGLRRRPTIGPRKRPAASTS
VL1_HPV51 TPPQAKPDPLAKYKFWDVDLKERFSLDLDQFALGRKFLLQVGVQRKPRPGLKR---PASS
VL1_HPV82 SPPQAKEDPLAKYKFWNVDLKERFSLDLDQFALGRKFLLQIGAQRKPRPGLKR-----PA
VL1_HPV26 APPVPKEDPFQKFKFWDVDLKEKFSIDLDQFPLGRKFMLQAGIQRRPKLGTKR-----PL
VL1_HPV69 APAQPKEDPFSKLKFWDVDLKEKFSIDLDQFPLGRKFMLQAGIQRRPKLGTKR--PASSL
VL1_HPV2A TPPKTPTDPYASLTFWDVDLSESFSMDLDQFPLGRKFLLQRGAMPTVSRKRAA-------
VL1_HPV57 TPPKTPTDPYATMTFWDVDLSESFSMDLDQFPLGRKFLLQRG--ATPTVSRKR------A
VL1_HPV61 AAPPPKEDRYAKLSFWTVDLRDKFSTDLDQFPLGRKFLLQAGPRSVSVSRKRA----APS
VL1_HPV62 ASPSPKVDPYAQMTFWTVDLKDKLSTDLDQFPLGRKFLLQAGSRPRSVAVSRKR----SA
VL1_HPV29 LAPTEKQDPYAKLNFWDVDLKDRFTLDLSQFPLGRKFLLQIGARRRSVVPSRK-----RR
VL1_HPV10 TPPTEKQDPYAKLNFWDVDLKDRFSLDLSQFPLGRKFLLQLGVRSRSAVSVRK----RPA
VL1_HPV28 ASPTTKEDPYAKLNFWEVDLKDRFSLDLSQFPLGRKFLMQLGVGARSSVSVRK----RPA
VL1_HPV03 APPTEKQDPYAKLNFWDVDLKDRFSLDLSQFPLGRKFLMQLGVGTRSSISVRK----RSA
VL1_HPV56 QPPTEKQDPLAKYKFWDVNLQDSFSTDLDQFPLGRKFLMQLGTRSKPAVATSK----KRS
VL1_HPV66 QPPAEKQDPLAKYKFWEVNLQDSFSADLDQFPLGRKFLMQLGPRPPRPKASVSASKRRAA
VL1_HPV30 QPPAEKEDPLAKYKFWDVNLQDSFSADLDQFPLGRKFLMQLGVRTKPSTTTKK---RSAP
VL1_HPV53 QPPPEKQDPLSKYKFWEVNLQNSFSADLDQFPLGRKFLMQVGVRTKPPVSSKKRS---AS
VL1_BPV3 EDAAATEDPYAKYTFWDVDLTERFSMNLDQYSLGRKFLFQIGKKSRGIKRSAP-KAVTFE
VL1_BPV4 TDTQVKEDPYKDLKFWDVDLTEKFTTNLNQHSLVRKFLFQIGRKATKRSAPKT----VTF
VL1_HPV24 VAPKEREDPYAPYTFWNVDLSERLSLELDQYSLGRKFLFQAGLVQKTSKKTSN-------
VL1_HPV19 NPPKEKVDPYKNLHFWNVDLSERLSLDLDQYALGRKFLFQAGLQQATVNGTKT------I
VL1_HPV25 NPPKEKVDPYKNLHFWDVDLTERLSLDLDQYSLGRKFLFQAGLQQTTVNGTKT------V
VL1_HPV21 NPPKEREDPYKNMKFWDVDLTERLSLDLDQYSLGRKFLFQAGLQQTTVNGTKT------L
VL1_HPV14 NPPKEREDPYKNFNFWNVDLTERLSLDLDQYSLGRKFLFQAGLQQSTVNGTKT------V
VL1_HPV20 NPPKEREDPYKDLNFWNVDLSERLSLELDQYSLGRKFLFQAGLQQATVNGTKT------V
VL1_HPV47 SPPKEKVDPYKGLNFWDVDMTERLSLDLDQYSLGRKFLFQAGLQQTTVNGTKT------T
VL1_HPV36 TPPKEKEDPYKGLKFWDVDLTERLSLDLDQYSLGRKFLFQAGLQQTTVSGTKS------V
VL1_HPV05 NPPKEKEDPYKGLHFWDVDLTERLSLDLDQYSLGRKFLFQAGLQQTTVNGTKA------V
VL1_HPV5B NPPKEKEDPYKGLHFWDVDLTERLSLDLDQYSLGRKFLFQAGLQHTTVNGTKA------V
VL1_HPV12 NPPKEKPDPYDGLSFWTVDMTERLSLDLDQYSLGRKFLFQAGLQQTTVNGTTK-----SS
VL1_HPV08 SPPKEKPDPYAKFNFWNVDLTERLSLDLDQYSLGRKFLFQAGLQQTTVNGTKS-------
VL1_HPV49 QPAPERKDPYEQYNFWTVDLTEKLSLDLDQYSLGRKFLFQAGLQRASRVSKSS-------
VL1_HPV09 VEPTEKEDPFAKYSFWKVDLTERLSLDLDQYPLGRKFLFQAGLQTRKRPIKTS-------
VL1_HPV15 VQPKDKEDPFGKYTFWNVDLTEKLSLDLDQYPLGRKFIFQAGLQRRPRTIKSS-------
VL1_HPV17 VVEKEKEDPFAKYTFWNVNLTEKLSLDLDQYPLGRKFIFQSGLQARPRTIRTS-------
VL1_HPV37 VVEKEKEDPFAKYTFWNVDLTEKLSLDLDQYPLGRKFIFQSGLQSRPRIVRSS-------
VL1_HPV38 VPETEKEDPFGQYTFWNVDMTEKLSLDLDQYPLGRKFLFQAGLQTARTRAVKR------P
VL1_HPV22 VPDTQKEDPFGQYTFWNVDMSEKLSLDLDQYPLGRKFLFQSGLQRARASARVS---VKRS
VL1_HPV23 VPDTQKEDPFGKYSFWNVDMTEKLSLDLDQYPLGRKFLFQIGVQRVRSGTKRP-------
VL1_HPV48 AEPEEDTDPYKAYSFWTLDMTERFSSDLSQFSLGRKFLYQTGLLNGKRARTDY------T
VL1_HPV50 DSSAEVVDPYKEYTFWNVNLTEKFSSELDQYALGRKFLFQTGLLKRRVRTDYT-------
VL1_HPV60 VPNTEREDPYKQYTFWTIDLQERFSNELSQFSLGKRYLYQYGLLNGRKRSASS-------
VL1_HPV04 TPATEKEDPYKDLSFWVVDLSERFSSELSQFSLGRRFLYQSGLINGSLKRKRI--ISSSH
VL1_HPV65 SPSTEKEDPYKDLSFWGVDLTERFSSELSQFSLGRRFLYQSGLINGTLKRKRT---INSQ
VL1_HPV41 DADDTSTDPYKDLKFWEVDLRDRMTEQLDQTPLGRKFLFQTGITQSSSNKRVS---TQST
VL1_CRPVK EPPKENTDPYKNYKFWEVDLSEKLSDQLDQYPLGRKFLNQSGLQRIGTKRPAP-------
VL1_COPV6 IPPKTNVDPFADFKFWEVDLKDKMTEQLDQTPLGRKFLFQTNVLRPRSVKVRS-----TS
VL1_HPV1 APPEPQTDPYSQYKFWEVDLTERMSEQLDQFPLGRKFLYQSGMTQRTATSSTT-----KR
VL1_HPV63 VPPPTPTDPYKDLRFWDVDLSERMSEQLDQFPLGRKFLYQSGLAQRSVPKTVN----FRK
* ** ::: : :: :* * .* . : *
VL1_BPV5 -STKKSTTNKKRKTSR---------
VL1_BPV1 SQKTSSKPAKKKKK-----------
VL1_BPV2 ATRNSSKPAKRKKIKA---------
VL1_PAPVD RYKRHMRITGTVRKVLLYICFSLNS
VL1_PAPVE PKVTEKRIVRKRRKGN---------
VL1_HPV43 SSSTSAPASKRKKTKR---------
VL1_HPV40 SSSSKPVTPKRKKTKR---------
VL1_HPV07 SSSSGSVTPKRKKTKR---------
VL1_HPV11 AVSKPSTAPKRKRTKTKK-------
VL1_HPV6A AVSKASAAPKRKRAKTKR-------
VL1_HPV6B AVSKASAAPKRKRAKTKR-------
VL1_HPV44 SAATSSSKQKRSRKK----------
VL1_HPV55 AATSSSSKPKRSRKK----------
VL1_HPV13 ASTSTATPTTRKKAKRK--------
VL1_PCPV1 ASTSSSTPTTRKRVKRK--------
VL1_HPV34 APSSSSTAPKKKRAKRI--------
VL1_HPV32 SSQKSSSPAKRRKTRK---------
VL1_HPV42 STAKSVSSAKRKKTHK---------
VL1_HPV54 PSSSKGTARKRAKTKR---------
VL1_RHPV1 SSTSSSSPRKRKRTKR---------
VL1_HPV52 -SSAPRTSTKKKKVKR---------
VL1_HPV67 PSSSSSSSAKRKKVKR---------
VL1_HPV33 PTSTRTSSAKRKKVKK---------
VL1_HPV58 -PTTRAPSTKRKKVKK---------
VL1_HPV35 ASTSKKSSTKRRKVKS---------
VL1_HPV31 PSASTTTPAKRKKTKK---------
VL1_HPV16 TTSSTSTTAKRKKRKL---------
VL1_HPV70 KSSSSASKHKRKRVSK---------
VL1_HPV39 TSSSSATKHKRKRVSK---------
VL1_HPV68 ATTTSTSKHKRKRVSK---------
VL1_HPVME ATTASTSKHKRKRVSK---------
VL1_HPV18 SATTSSKPAKRVRVRARK-------
VL1_HPV45 TASTASRPAKRVRIRSKK-------
VL1_HPV51 ASSSSSSSAKRKRVKK---------
VL1_HPV82 PSSSASSSAKRKRVKK---------
VL1_HPV26 SSTSSSTKRKKRKLTK---------
VL1_HPV69 SASSSSTTRKKRKLTK---------
VL1_HPV2A VSGTTPPTSKRKRVRR---------
VL1_HPV57 AATAAAPTAKRKKVRR---------
VL1_HPV61 STPTSSPATKRKKRKQ---------
VL1_HPV62 PTKQSPTSAKRKRRK----------
VL1_HPV29 TTTTAPTPAKRKRSKK---------
VL1_HPV10 TSATGSTAAKRKRTKK---------
VL1_HPV28 STTRGSSAAKRKRAKK---------
VL1_HPV03 TTTSRTAAAKRKRTKK---------
VL1_HPV56 APTSTSTPAKRKRR-----------
VL1_HPV66 PTSSSSSPAKRKKR-----------
VL1_HPV30 SSSTSTPSAKRKRR-----------
VL1_HPV53 TTSTSAPSSKRKRK-----------
VL1_BPV3 SSSRSKKAPKRRRKNV---------
VL1_BPV4 ENTEGKKAPKRRRKNV---------
VL1_HPV24 ----VSKGTKRKRT-----------
VL1_HPV19 SSRVSSRGTKRKRKN----------
VL1_HPV25 SSRISTRGIKRKRKN----------
VL1_HPV21 SSRVSTRGIKRKRKN----------
VL1_HPV14 STRGSIKGIKRKRKN----------
VL1_HPV20 SSKLSTRGVKRKRKQ----------
VL1_HPV47 PYRGSIRGTKRKRKN----------
VL1_HPV36 SYRGFTRGTKRKRKQ----------
VL1_HPV05 SYKGSNRGTKRKRKN----------
VL1_HPV5B SYKGSNRGTKRKRKN----------
VL1_HPV12 SYRSSIRGTKRKRKN----------
VL1_HPV08 ISRGSVRGTKRKRKN----------
VL1_HPV49 AARASTRGIKRKRR-----------
VL1_HPV09 --VKTSKNAKRRRT-----------
VL1_HPV15 --VKVSKGTKRKRT-----------
VL1_HPV17 --VKVPKGIKRKRS-----------
VL1_HPV37 --VKVSKGTKRKRS-----------
VL1_HPV38 LVRKSSKSVKRKRTQ----------
VL1_HPV22 ATRKTSKTVKRRKLTS---------
VL1_HPV23 ATRKVTKTVKRKKVQL---------
VL1_HPV48 AAGSSTRSTKRRRVR----------
VL1_HPV50 -VATVSKPNKRKRTR----------
VL1_HPV60 FVTKKSKTVKRKRTK----------
VL1_HPV04 AQTNTKRSAKRKRSLK---------
VL1_HPV65 APTSIKRSAKRKRSIKQ--------
VL1_HPV41 ALTTYRRPTKRRRKA----------
VL1_CRPVK APVSIVKSSKRKRRT----------
VL1_COPV6 HVSVKRKAVKRKRK-----------
VL1_HPV1 KTVRVSTSAKRRRKA----------
VL1_HPV63 RRSSNTTVAKRRRRA----------