CLUSTAL format seed alignment for MF_04015
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Features found in the protein:- The following colors are used to highlight features:
- blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
- magenta is used to display DISULFID, THIOLEST and THIOETH.
- red is used for all other features, such as INIT_MET, ACTIVE SITE,
METAL,BINDING, NP_BIND, SITE, REGION, etc.
- The ID of the sequence used as the template for feature propagation is
underlined.
- A '<' at the beginning of a sequence or '>' at the end indicate that
the protein is fused with another domain either at the N- or C-terminus.
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TRM2_HHV11 --------------------------------------------MAGREGRTRQRTLRDT
TRM2_HHV2H --------------------------------------------MAGRAGRTRPRTLRDA
TRM2_PSHV1 --------------------------------------------MASLIGAGTAARLDRV
TRM2_EHV1B MYGRSNAPGCQPPVRAHPPSSPMTSRLQLAAMEQNASDAALSGMQQARSRQASPKRLRDL
TRM2_GAHVM ------------------------------------------MAGENTSRRTGSARLDEV
TRM2_VZVD --------------MYESENASEHHPELEDVFSENTGDSNPSMGSSDSTRSISGMRARDL
TRM2_EHV2 ------------------------------------------------MTSFHTRRVEDR
TRM2_HHV8P -----------------------------------------------------MEYASDQ
TRM2_ALHV1 ---------------------------------------------------MDLSNLLDF
TRM2_HCMVM --------------------MSWAKQRVPFLDDDDGEEENDVQDDVDSPVPTRPLVIDED
TRM2_HCMVA --------------------MSWAKQRVPFLDDDDGEEENDVQDDVDSPVPTRPLVIDED
TRM2_HHV6U -----------------------------MMDS--------------SPEKTNLELLYER
TRM2_HHV6Z -----------------------------MMDS--------------SPEKTNLELLYEQ
G3CKQ2_EBVG ------------------------------------------MTHLGGKVRSSGFLIPGS
TRM2_HHV11 IPDC-------ALRSQTLESLDARYVSRDGAHDAAVWFEDMTPAELEVVFPTTDAKLNYL
TRM2_HHV2H IPDC-------ALRSQTLESLDARYVSRDGAGDAAVWFEDMTPAELEVIFPTTDAKLNYL
TRM2_PSHV1 IPEQ-------ELAERPLSELFRDYVESAPERRYEVWFFNVTPPEMELALPTTDAKLNYL
TRM2_EHV1B IPSS-------DVESMSLNALDDAY----GHHDFSVWFEDLMPPEMELLMPTTDAKLNYL
TRM2_GAHVM IPEF-------ELVSTDVKILAEKYLQ--DERIYRIWFEYLIPDEIDLIFPTTDGKLNYL
TRM2_VZVD ITDT-------DVNLLNIDALESKYFPADSTFTLSVWFENLIPPEIEAILPTTDAQLNYI
TRM2_EHV2 D--------------------------------SLIDFQSMLPPDIKIIAPTTYTRLNLL
TRM2_HHV8P ----------------------------------------LLPRDMQILFPTIYCRLNAI
TRM2_ALHV1 --------------------------------------PSILPEDIQVIAPTSYAKLSLL
TRM2_HCMVM AEPAAGTSGGLEGGGGDDEDGEDGHALPDLDDDLLLQFEPMLPRVYDLLLPSLDARLNFV
TRM2_HCMVA AEPAAGTSGGLEGGGGDDEDGEDGHALPDLDDDLLLQFEPMLPRVYDLLLPSLDARLNFV
TRM2_HHV6U V----------------CEQGRE----------FEVVFYPMLPRLYEMMLPSLEARLNFL
TRM2_HHV6Z V----------------CEQGRE----------FEVVFYPMLPRLYEMMLPSLEARLNFL
G3CKQ2_EBVG APVSGTP-------PQGQGGLASSRVYEDSGGSFLSFSPMIHPNLAPIIAPSAYARLNLL
: * *: :*. :
TRM2_HHV11 SRTQRLASLLTYAGPIKAPDDAAAPQTPDTA---CVHGELLAAKRERFAAVINRFLDLHQ
TRM2_HHV2H SRTQRLASLLTYAGPIKAPDGPAAPHTQDTA---CVHGELLARKRERFAAVINRFLDLHQ
TRM2_PSHV1 AHTANLASAVRYD---------CAGDTDGGR---CVHARLLERRRERFAKILNKFLDLHQ
TRM2_EHV1B SFTRRLASSVFHS---------PDNRMPGGA---CDHTSALDARKERFATIINKFLDLHQ
TRM2_GAHVM SFTKRLASAIRYGRIKTAVSNNSSSNSYGSTEHVCDHGTSLCGRSERFASVINRFLDLHQ
TRM2_VZVD SFTSRLASVLKHK--------ESNDSEKSAYVVPCEHSASVTRRRERFAGVMAKFLDLHE
TRM2_EHV2 NYCQFLELFMQLR---------------ASG-CRCEHGEILESKIRAVRQVISKIVETDT
TRM2_HHV8P NYCQYLKTFLVQR---------------AQP-AACDHTLVLESKVDTVRQVLRKIVSTDA
TRM2_ALHV1 SHCQHLKLFIGQQ---------------GSK-GVCAHSRVLEEKLEAVKEVISKIIETDK
TRM2_HCMVM NAGQKYAAFLKYV---------------HGDCATCSHGEILREKTQLLTAIVSKLMDING
TRM2_HCMVA NAGQKYAAFLKYV---------------HGDCATCSHGEILREKTQLLTAIVSKLMDING
TRM2_HHV6U SVGYRHVAFARYV---------------HGD-VDCVHREVMAQKMVLLTSILSKLLNVNG
TRM2_HHV6Z SVGYRHVAFSRYV---------------HGD-VDCVHREVMAQKMVLLTSILSKLLNVNG
G3CKQ2_EBVG NHCIFLEAFKEEN---------------SGQGLGGVQREVL--KRDIIKQVIARIVAADS
: : : . :: ::: .
TRM2_HHV11 ILRG---------------
TRM2_HHV2H ILRG---------------
TRM2_PSHV1 ILGTIQQ------------
TRM2_EHV1B ILHDA--------------
TRM2_GAHVM ILKDC--------------
TRM2_VZVD ILKDA--------------
TRM2_EHV2 VFNGVKKN-----------
TRM2_HHV8P VFSEARARP----------
TRM2_ALHV1 ILEKSEKFL----------
TRM2_HCMVM ILEGKDEPAPGK-------
TRM2_HCMVA ILEGKDESAPGK-------
TRM2_HHV6U ILEHQEYLNTE--------
TRM2_HHV6Z ILEHQEYLNTE--------
G3CKQ2_EBVG TLDLVNHGEPGREAPRRAQ
: