CLUSTAL format seed alignment for MF_04080
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Features found in the protein:
- The following colors are used to highlight features:
- blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
- magenta is used to display DISULFID, THIOLEST and THIOETH.
- red is used for all other features, such as INIT_MET, ACTIVE SITE,
METAL,BINDING, NP_BIND, SITE, REGION, etc.
- The ID of the sequence used as the template for feature propagation is
underlined.
- A '<' at the beginning of a sequence or '>' at the end indicate that
the protein is fused with another domain either at the N- or C-terminus.
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VPR_HV1A2 MEQAPEDQGPQREPYNEWTLELLEELKREAVRHFPRPWLHSLGQYIYETYGDTWAGVEAI
VPR_HV1Y2 MEQAPEDQGPQREPHNEWTLELLEELKREAVRHFPRPWLHGLGQHIYETYGDTWAGVEAI
VPR_HV19N MEQAPEDQGPQREPYNEWTLELLEELKNEAVRHFPRPWLHGLGQYIYNTYGDTWEGVEAI
VPR_HV1SE MEQAPEDQGPQREPYNEWALELLEELKNEAVRHFPRLWLHGLGQHIYNTYGDTWEGVEAI
VPR_HV1VI MEQAPGDQGPQREPYNEWALEILEELKNEAVRHFPRPWLHGLGQHIYNTYGDTWEGVEAI
VPR_HV1YB MERAPEDAGPQREPYNEWALELLEELKNEAVRHFPRIWLHGLGQHIYNTYGDTWEGVEAI
VPR_HV1YF MERAPEDAGPQREPYNEWALELLEELKNEAVRHFPRIWLHGLGQHIYNTYGDTWEGVEAI
VPR_HV190 MEQAPEDQGPQREPHNEWTLELLEEIKNEAVRHFPRVWLHQLGQHIYNTYGDTWVGVEAL
VPR_HV1V9 MEQAPEDQGPQREPHNEWTLELLEELKSEAVRHYPRPWLHDLGQHIYNTYGDTWEGVEAI
VPR_HV193 MEQAPEDQGPQREPYNEWTLDLLEELKNEAVRHFPRPWLHSLGQHIYNTYGDTWEGVEAI
VPR_HV1MP MEQPPEDQGPQREPYNEWTLELLEELKNEAVRHFPREYLHGLGQYIYNTYGDTWRGVETM
VPR_HV1M2 MEQPPEDQGPQREPYNEWTLELLEELKHEAVRHFPREWLHGLGQHIYNTYGDTWEGVEAI
VPR_HV1S9 MEQAPEDQGPQREPYHEWTLELLEELKNEAVRHFPRPWLHGLGQYVYSTYGDTWEGVEAV
VPR_HV1S2 MEQAPEDHGPQREPYHEWTLELLEELKNEAVRHFPRPWLHSLGQYIYSTYGDTWEGVEAI
VPR_HV196 MEQAPEDQGPQREPNNEWTLEILEELKREAVRHFPRPWLHNLGQHIYTTYGDTWEGLEAI
VPR_HV197 MEQAPEDQGPQREPYNEWTIEILEELKREAVRHFPRPWLHDLGQHIYNNYGDTWEGVEAI
VPR_HV1MA MEQAPADQGPQREPHNEWTLELLEELKQEAVRHFPRIWLHSLGQHIYETYGDTWEGVEAI
VPR_HV1EL MEQAPADQGPQREPYNEWALELLEELKSEAVRHFPRIWLHSLGQHIYETYGDTWVGVEAI
VPR_HV1OY MEQAPEDQGPQREPYNEWTLELLEELKSEAVRHFPRIWLHSLEQYIYETYGDTWEGVEAI
VPR_HV1Z2 MEQAPEDQGPQREPYNEWTLELLEELKSEAVRHFPRIWLHSLGQYIYETYGDTWAGVEAL
VPR_HV1S3 MEQAPENQGPQREPYNEWTLELLEELKSEAVRHFPRIWLHSLGQHIYKTYGDTWTGVEAL
VPR_HV1RH MEQAPEDQGPQREPYNEWTLELLEELKSEAVRHFPRLWLHSLGQHIYETYGDTWAGVEAI
VPR_HV1H3 MEQAPEDQGPQREPHNEWTLELLEELKNEAVRHFPRIWLHGLGQHIYETYGDTWAGVEAI
VPR_HV112 MEQAPEDQGPQREPHNEWTLELLEELKNEAVRHFPRIWLHGLGQHIYETYGDTWAGVEAI
VPR_HV1B1 MEQAPEDQGPQREPHNEWTLELLEELKNEAVRHFPRIWLHGLGQHIYETYGDTWAGVEAI
VPR_HV1B5 MEQAPEDQGPQRKPHNEWTLELLEELKNEAVRHFPRIWLHGLGQHIYETYGDTWAGVEAI
VPR_HV1H2 MEQAPEDQGPQREPHNEWTLELLEELKNEAVRHFPRIWLHGLGQHIYETYGDTWAGVEAI
VPR_HV1BR MEQAPEDQGPQREPHNEWTLELLEELKNEAVRHFPRIWLHGLGQHIYETYGDTWAGVEAI
VPR_HV1N5 MEQAPEDQGPQREPYNEWTLELLEELKSEAVRHFPRIWLHNLGQHIYETYGDTWAGVEAI
VPR_HV1JR MEQAPEDQGPQREPYNEWTLELLEELKNEAVRHFPRIWLHSLGQYIYETYGDTWAGVEAI
VPR_HV1SC MEQAPEDQGPQREPYNEWTLELLRKLKSEAVRHFPRIWLHGLGQHIYETYGDTWAGVEAI
VPR_HV1B9 MEQAPEDQGPQREPYNDWTLELLEELKNEAVRHFPRIWLHSLGQHIYETYGDTWTGVEAL
VPR_HV1MN MEQAPEDQGPQREPYNQWALELLEELKNEAVRHFPRIWLHGLGQHIYETYGDTWAGVEAI
VPR_HV192 MEQAPEDQGPQREPYNEWTLELLEELKREAVRHFPRPWLHGLGQHIYETYGDTWTGVEAI
VPR_HV1ET MEQAPEDQGPQREPYNEWALELLEELKQEAVRHFPRPWLHNLGQYIYETYGDTWSGVEAL
VPR_HV1AN MEQAPENQGPAKEPFNEWALELLEELKAEAVRHFPRPWLHALGQYIYETYGDTWVGVMAI
VPR_HV1MV MEQALENQGPAREPFNEWTLELLEELKEEAVRHFPRPWLQACGQYIYETYGDTWEGVMAI
**:. : ** ::* ::*::::*.::* *****:** :*: *::* .***** *: ::
VPR_HV1A2 IRILQQLLFIHFRIGCQHSRIGIIQ---QRRARRNGASRS
VPR_HV1Y2 IRILQQLLFIHFRIGCQHSRIGIIQ---QRRARRNGASRS
VPR_HV19N IRILQQLLFIHFRIGCQHSRIGITP---QRRV-RDGPGRP
VPR_HV1SE IRILQQLLFIHFRIGCQHSRIGITP---RRRV-RDGPGRS
VPR_HV1VI IRILQQLLFIHFRIGCRHSRIGIVP---QRRV-RNGASRS
VPR_HV1YB IRILQQLLFIHYRIGCQHSRIGITP---QRR--RNGASRS
VPR_HV1YF IRILQQLLFIHYRIGCQHSRIGITP---QRR--RNGTSRS
VPR_HV190 IRTLQQLLFIHFRIGCQHSRIGITR---QRRV-RNGPSRS
VPR_HV1V9 IRTLQQLLFAHFRIGCQHSRIGITR---QRRV-RNGPSRS
VPR_HV193 IRILQQLLFIHFRIGCRHSRIGITR---QRRV-RNGTSRS
VPR_HV1MP IRILQQLLFIHFRIGCHHSRIGIIR---QRRL-RNGSSRS
VPR_HV1M2 IRILQQLLFIHFRIGCHHSRIGIIR---QRRI-RNGSGRS
VPR_HV1S9 IRILQQLLFIHFRIGCHHSRIGIIP---QRRG-RNGASRS
VPR_HV1S2 IRILQQLLFIHFRIGCHHSRIGIIP---QRRG-RNGASRS
VPR_HV196 IRILQQLLFIHFRIGCHHSRIGIIP---QRRG-RNGSSRS
VPR_HV197 IRILQQLLFIHFRIGCHHSRIGILR---QRRG-GNGASRS
VPR_HV1MA IRSLQQLLFIHFRIGCQHSRIGITR---QRRA-RNGSSRS
VPR_HV1EL IRILQQLLFIHFRIGCQHSRIGIIR---QRRA-RNGSSRS
VPR_HV1OY IRILQQLLFIHFRIGCQHSRIGITR---QRRA-RNGASRS
VPR_HV1Z2 IRILQQLLFIHFRIGCQHSRIGITR---QRRA-RNGSSRS
VPR_HV1S3 IRILQQLLFIHFRIGCQHSRIGITR---QRRA-RNGASRS
VPR_HV1RH IRILQQLLFIHFRIGCQHSRIGITR---QRRA-RNGASRS
VPR_HV1H3 IRILQQLLFIHFQNWVST----------------------
VPR_HV112 IRILQQLLFIHFQNWVST----------------------
VPR_HV1B1 IRILQQLLFIHFQNWVST----------------------
VPR_HV1B5 IRILQQLLFIHFQNWVST----------------------
VPR_HV1H2 IRILQQLLFIHFRIGCRHSRIGVTR---QRRA-RNGASRS
VPR_HV1BR IRILQQLLFIHFRIGCRHSRIGVTQ---QRRA-RNGASRS
VPR_HV1N5 IRILQQLLFIHFRIGCRHSRIGVTR---QRRA-RNGASRS
VPR_HV1JR IRILQQLLFIHFRIGCRHSRIGITR---QRRA-RNGASRS
VPR_HV1SC IRILQQLLFIHFRIGCRHSRIGIIQ---QRRS-RNGSSRS
VPR_HV1B9 IRILQQLLFIHFRIGCRHSRIGIIQ---QRRT-RNGASKS
VPR_HV1MN IRILQQLLFIHFRIGCRHSRIGIIR---QRRA-RNGASRS
VPR_HV192 IRILQRLLFVHFRIGCQHSRIGILR---QRRA-RNGASRS
VPR_HV1ET IRTLQQLMFIHFRIGCQHSRIGILR---QRRA-RNGASRS
VPR_HV1AN IRILQQLLFTHYRIGCQHSRIGINP---RGRGRRNGSSRS
VPR_HV1MV IRILQQLLFTHYRIGCQHSRIGILPSNTRGRGRRNGSSRS
** **:*:* *::