CLUSTAL format seed alignment for MF_04082
_____________________________________________________________________________
Features found in the protein:
- The following colors are used to highlight features:
- blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
- magenta is used to display DISULFID, THIOLEST and THIOETH.
- red is used for all other features, such as INIT_MET, ACTIVE SITE,
METAL,BINDING, NP_BIND, SITE, REGION, etc.
- The ID of the sequence used as the template for feature propagation is
underlined.
- A '<' at the beginning of a sequence or '>' at the end indicate that
the protein is fused with another domain either at the N- or C-terminus.
_____________________________________________________________________________
VPU_HV192 MLELIGRIDYRLGVGALIVALIIVIIVWTIAYIEYRKLVRQ-RRIDWLVKRIKE-RAEDS
VPU_HV1ET MVDLLAKVDYRIVIVAFIVALIIAIVVWTIAYIEYRKLLRQ-RRIDRLIKRTRE-RAEDS
VPU_HV190 -MYILG-----LGIGALVVTFIIAVIVWTIVYIEYKKLVRQ-KKIDRLIERIGE-RAEDS
VPU_HV1VI -MSYLL----AIGIAALIVALIIAIVVWTIVYIEYKKLVRQ-RKINKLYKRIRE-RAEDS
VPU_HV193 -MSNLL----AIGIAALIVALIITIVVWTIAYIEYKKLVRQ-RKINRLYKRISE-RAEDS
VPU_HV1EL -MQPLG----IIAIAALVVAIILAIVVWTIVFIEYRRIKKQ-RRIDCLLDRITE-RAEDS
VPU_HV1ND -MQPLV----IIAIAALVVAIIIAIVVWTIVYIEYRRIKRQ-RKIDCLIDRIRE-RAEDS
VPU_HV1Z2 -MQPSQ----IIAIAALVVAAIIAIVVWTIVFIEYRRIKRQ-RKIDCIIDRIRE-RAEDS
VPU_HV1MA --QPLV----ILAIVALVVTLIIAIVVWTIVFIEIRKIRRQ-RKIDRLIDRIRE-RAEDS
VPU_HV1B1 -MQPIQ----I-AIVALVVAIIIAIVVWSIVIIEYRKILRQ-RKIDRLIDRLIE-RAEDS
VPU_HV1H3 -MQPIQ----I-AIVALVVAIIIAIVVWSIVIIEYRKILRQ-RKIDRLIDRLIE-RAEDS
VPU_HV1LW -MQPIQ----I-AIVALVVAIIIAIVVWSIVIIEYRKILRQ-RKIDRLIDRLIE-RAEDS
VPU_HV1BR -MQPIQ----I-AIAALVVAIIIAIVVWSIVIIEYRKILRQ-RKIDRLIDRLIE-RAEDS
VPU_HV1H2 --QPIP----IVAIVALVVAIIIAIVVWSIVIIEYRKILRQ-RKIDRLIDRLIE-RAEDS
VPU_HV1B8 --QPIP----IVTIVALAVAIIIAIVVWSIVIIEYRKILRQ-RKIDRLIDRLIE-RAEDS
VPU_HV1BN -MQPLQ----ISAIVALVVAAIIAIVVWSIALLEYRKLLRQ-RKIDRLIDRIRE-RAEDS
VPU_HV1SC -MQPLQ----ILSIVALVVAAIIAIVVWSIVFILIRKILRQ-RKIDRLIDRIRE-RAEDS
VPU_HV1MN -MQPLV----IAAIVALVVAGIIAIVVWSIVFIEYRKIRRQ-RKIDKLIDRISE-RAEDS
VPU_HV1JR -MQPLQ----ILAIVALVVAGIIAIIVWSIVLIEYRKILRQ-RKIDRLIDKIRE-RAEDS
VPU_HV1J3 -MQSL-----IAAIVALVVVAIIAIVVWSIVFIEYRKILRQ-RKIDRLIDRIRE-RAEDS
VPU_HV1S1 -MQPLQ----ILAIVALVVAAIIAIVVWTIVYIEYRKILRQ-RKIDRLIDRITE-RAEDS
VPU_HV1Y2 -LQSLQ----VLAIVALVVATIIAIVVWTIVFIEYRKILRQ-RKIDRLINRITE-RAEDS
VPU_HV1B9 -MLSLQ----ILAIVALVVAAIIAIVVWSIVFIEYRKILRQ-RKIDRLIDRIRE-REEDS
VPU_HV1A2 -MQSLQ----ILAIVSLVVVAIIAIVVWTIVLIEYRKILRQ-RKIDRLFDRIRE-KAEDS
VPU_HV1C4 -MQSLE----IVAIVELVVAAIIAIVVWTIVFIEYRKILRQ-RKIDRLIDRIRE-REEDN
VPU_HV1RH -MQSLE----ILAIVALVVAAILAIVVWTIVGIEIRKTLRQ-KKIDRLIDRIRE-RAEDS
VPU_HV1Z3 -MSILQ----IVAIVAIIVALILAIVVWTIVYIEYKRLLRQ-RKIDWLIDRIRE-RAEDS
VPU_HV1YB -MLWLG-------FIALGVAIIIAAIIWVLLYKEYKKIKLQ-EKIEQIRQKIRD-RTEDR
VPU_HV1YF -MLSLG-------FIALGAAVSIAVIVWALLYREYKKIKLQ-EKIKHIRQRIRE-REEDS
VPU_HV1AN -MHHRD----LLAIIIISALLFINVILWGFILRKYLEQKEQDRKEREILERLRRIREIRD
VPU_HV1MV -MHQEN----LLALIALSALCLINVLIWLFNLRIYLVQRKQDRREQEILERLRRIKEIRD
. : . : ::* : * .: : .: :
VPU_HV192 GNESGGDTEELETMVDMG----HLRLLDGNDL--
VPU_HV1ET GNESDGDTEELSTMVDMG----NLRLLDVNDL--
VPU_HV190 GNESDGDTEELSKLMEMG----HLNLGYVADL--
VPU_HV1VI GNESEGDAEELAALGEMG----PFIPGDINNL--
VPU_HV193 GNESEGDAEELAALGEVG----PFIPGDINNL--
VPU_HV1EL GNESEGDREKLSKLVEMG----HHAPWDIDDL--
VPU_HV1ND GNESEGEREELSKLVEMG----HHAPWDVDDL--
VPU_HV1Z2 GNESEGDREELSKLVEMG----HHAPWDIDDL--
VPU_HV1MA GNESEGDTEELSKLVEMG----HDAPWDVDDL--
VPU_HV1B1 GNESEG---EISALVEMGVEMGHHAPWDVDDL--
VPU_HV1H3 GNESEG---EISALVEMGVEMGHHAPWDVDDL--
VPU_HV1LW GNESEG---EISALAEMGVEMGHHAPWDVDDL--
VPU_HV1BR GNESEG---EISALVEMGVEMGHHAPWDIDDL--
VPU_HV1H2 GNESEG---EISALVEMGVEMGHHAPWDVDDL--
VPU_HV1B8 GNESEG---EISALVEMGVEMGHHAPWDVDDL--
VPU_HV1BN GNESEGDQEELSALVEMG---GHDAPWDIDDL--
VPU_HV1SC GNESEGIRKELSALVEMG----HDAPGDIDDL--
VPU_HV1MN GNESEGDQEELSALVGMG----HDAPWVINDL--
VPU_HV1JR GNESEGDQEELSALVERG----HLAPWDINDL--
VPU_HV1J3 GNESEGDQEELSALVEMG----HDAPWDIDDL--
VPU_HV1S1 GNESEGDQEELSALVERG----HLAPWDVDDL--
VPU_HV1Y2 GNESDGDQEELSALVERG----HLAPWDVDDL--
VPU_HV1B9 GNESEGDQEELAAL-ERG----HLAPWDVDDL--
VPU_HV1A2 GNESERDQEELSALVEMG----HLAPWDVDDL--
VPU_HV1C4 GNESEGDQEELSALVEMG----HHAPWNVDDL--
VPU_HV1RH GNESDGDEEELSALVEMG----HHAPWDVDDL--
VPU_HV1Z3 GNESEGDTEELSTLVEME----PDNFRNDNDM--
VPU_HV1YB GKESDGDAEWL-------AILLSPDKLD--NWV-
VPU_HV1YF GNESDGDAEWLDGDEEWLVTLLSSSKLDQGNWV-
VPU_HV1AN DSDYESNGEEEQEVMDLV----LSHGFDNPMFEP
VPU_HV1MV DSDYESNEEEQQEVMELI----HSHGFANPMFEL
..: