CLUSTAL format seed alignment for MF_04093
_____________________________________________________________________________
Features found in the protein:- The following colors are used to highlight features:
- blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
- magenta is used to display DISULFID, THIOLEST and THIOETH.
- red is used for all other features, such as INIT_MET, ACTIVE SITE,
METAL,BINDING, NP_BIND, SITE, REGION, etc.
- The ID of the sequence used as the template for feature propagation is
underlined.
- A '<' at the beginning of a sequence or '>' at the end indicate that
the protein is fused with another domain either at the N- or C-terminus.
_____________________________________________________________________________
NSP6_ROT41 MNHRQQRQLFLENLLVGMNCMFHQMQKRSINTCCQNLQKILDRLILLQTIHSPAFRLDRM
NSP6_ROTRA -----------------MNCMFHQMQKRSTNTCCQNLQKILDHLILLQTIHSPVFRLDRM
NSP6_ROTHK MNRLLQRQLFLENLLVGTNSMFHQISMRSINTCCRSLQRILDHLILLQTIHSPAFRLDRM
NSP6_ROTHW MNRLLQRQLFLENLLVGTNSMFHQISKHSINTCCRSLQRILDHLILLQTIHSPVFRLDRM
NSP6_ROTAD MNRLLQRQLFLENLLVGTNSMFHQISKHSINTCCRSL-----------------------
NSP6_ROTRH MNHLQRRQLFLENLLVGVNSTFHQMQKHSISTCCRSLQRILDHLILLQTTHSPVFRLDRM
NSP6_ROTHB MNRLQQRQPFLENLLVGVNSTFHQMQKLSINTCCQNLQKILDLLILHRTIHSPAFRLDRM
NSP6_ROTHD MNRLQQRQLFLENLLVGVNSTFHQMQKLSINTCCQNLQKILDLLILHRTIHSPAFRLDRM
NSP6_ROTH6 MNRLQQRQLFLENLLVGVNSTFHQMQKLSINTCCRSLQRILDHLILHQTIHSPAFRLDRM
NSP6_ROTS1 MNRLQQRQLFLENLLVGVNSTFHQMQKHSINTCCRSLQRILDHLILLQTIHSPVFRLDRM
NSP6_ROTSH MNRLQQRQLFLENLLVGVNSTFHQMQKHSINTCCRSLQRILDHLILLQTIHSPVFRLDRM
NSP6_ROTHT MNRLLQRRLFLENLLVGVNSTFHQMQKHSINTCCRSLQRILDHLILLQTIHSPAFRLDRM
NSP6_ROTHL MNRLLQRQLFLENLLVGVNSTFHQMQKHSINTCCRSLQRILDHLILLQTIHSPAFRLDRM
NSP6_ROTPY MNRLLQRQLFLENLLVGVNSTFHQMQKHSINTCCRSLQRILDHLILLQTIHSPVFRLDRM
NSP6_ROTHP MNRLLQRQLFLENLLVGVNSTFHQMQKHSINTCCRSL-----------------------
NSP6_ROTWI MNRLLQRQLFLENLLVGVNSTFHQM-----------------------------------
NSP6_ROTBU MNHLQQRQLFLENLLVGVNNMFHQMQKRPVNTCCRSLQKILDHLILLQTIHSPAFRLDQM
NSP6_ROTH3 MNHLQQRQLFLENLLVGVNNTFHQMQKRSVSTCCQSLQKILDHLILLQTIHSPVFRLDRM
NSP6_ROTH7 MNHLQQRQLFLENLLVGVNNTFHQMQKHSINTCCQSLQKILDHLILLQTIHSPAFRLDRM
NSP6_ROTRF MNHLQQRQLFLENLLVGVNSTFHQMQKHSVNTCCQSLQKILDHLILLQTIHSPAFRLDRM
NSP6_ROTW3 MNHLQQRQLFLENLLVGVNNTFHQMQKHSVNTCCQSLQKILDHLILLQTIHSPAFRLDRM
* ***:
NSP6_ROT41 QLRQMQTLACLWIHQHNHDHQVMLGAIKWISPLTKQ--
NSP6_ROTRA QLRQMQTLACLWIHQHNHDHQVMLGAIKWISPLIKQ--
NSP6_ROTHK RLRQMQMLACLWIHQHNHDLQATLGAIKWISP------
NSP6_ROTHW QLRQMQMLACLWIHQHNHDLQATLGAIKWISP------
NSP6_ROTAD --------------------------------------
NSP6_ROTRH QLRQMQTLACLWIHRHNHDLQVTLDAIKWISP------
NSP6_ROTHB QLRQMQMLACLWIHQRNHDHLATLDTIKWISP------
NSP6_ROTHD QLRQMQMLACLWIHQRNHDHLATLDTIKWISP------
NSP6_ROTH6 QLRQMQMLACLWIHQHNHDHQVILDAIKWISP------
NSP6_ROTS1 QLRQMQTLACLWIHQHNHDLQVMSDAIKWISP------
NSP6_ROTSH QLRQMQTLACLWIHQHNHDLQVMSDAIKWISP------
NSP6_ROTHT QLRQMRTLACLWIHRRNHDLQATLDAINWISP------
NSP6_ROTHL QLRQMQTLACLWIHRRNHDLQATLDVINWISP------
NSP6_ROTPY QLRQMQTLACLWIHRRNHDLQVTLGAIKWISP------
NSP6_ROTHP --------------------------------------
NSP6_ROTWI --------------------------------------
NSP6_ROTBU QLRQMQTLACLWIHQYNHDHQVTLGAIKWISPLIKELK
NSP6_ROTH3 QLRQMQTLACLWIH------------------------
NSP6_ROTH7 QLRQMQTLACLWIHQHNHDHQAMLGAIKWISPLIKELR
NSP6_ROTRF QLRQMQTLACLWIHQHNHGHQAMLGAIKWISPLIKELV
NSP6_ROTW3 QLRQMQTLACLWIHQHNHGHQAMLGAIKWISPLIKELK