CLUSTAL format seed alignment for MF_04202
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Features found in the protein:
- The following colors are used to highlight features:
- blue indicates SIGNAL, PROPEP, TRANSMEM, DOMAIN, ZN_FING, REPEAT,
DNA_BIND and CA_BIND.
- magenta is used to display DISULFID, THIOLEST and THIOETH.
- red is used for all other features, such as INIT_MET, ACTIVE SITE,
METAL,BINDING, NP_BIND, SITE, REGION, etc.
- The ID of the sequence used as the template for feature propagation is
underlined.
- A '<' at the beginning of a sequence or '>' at the end indicate that
the protein is fused with another domain either at the N- or C-terminus.
_____________________________________________________________________________
VME1_BC279 -MTDNG------TITVEELKQLLEQWNLVIGFIFLAWIMLLQFAYSNRNRFLYIIKLVFL
VME1_SARS -MADNG------TITVEELKQLLEQWNLVIGFLFLAWIMLLQFAYSNRNRFLYIIKLVFL
VME1_BCRP3 -MAENG------TISVEELKRLLEQWNLVIGFIFLAWIMLLQFAYSNRNRFLYIIKLVFL
VME1_BCHK3 -MADNG------TITVEELKQLLEQWNLVIGFIFLAWIMLLQFAYSNRNRFLYIIKLVFL
VME1_BCHK9 -MSNNCTN----TVPRPEVIAALKDWNFAVSVILLFITVLLQWGYPSRCKPIWVIKMFIL
VME1_CVEMC -MSNMT------QLTEAQIIAIIKDWNFAWSLIFLLITIVLQYGYPSRSMTVYVFKMFVL
VME1_BCHK5 MASSNV------TLSNDEVLRLVKDWNFTWSVVFLLITIVLQYGYPSRSMFVYVIKMFVL
VME1_BCHK4 -MSSNG------SLTKDEVVNIIKDWNFSWSIIFLLITIVLQYGYPSRSMMVYVFKMFIL
VME1_BC133 -MSSNG------SLTKDEVVNIIKDWNFSWSIIFLLITIVLQYGYPSRSMMVYVFKMFIL
VME1_CVHN1 -MNKSFLP----QFTSDQAVTFLKEWNFSLGVILLFITIILQFGYTSRSMFVYLIKMIIL
VME1_CVHN2 -MNESIFP----HWNSDQAITFLKEWNFSLGVILLLITIILQFGYTSRSMFVYLIKMIIL
VME1_CVHN5 -MNESIFP----HWNSDQAITFLKEWNFSLGVILLLITIILQFGYTSRSMFVYLIKMIIL
VME1_CVM2 MNSTTQAPQPVYQWTADEAIRFLKEWNFSLGIILLFVTIILQFGYTSRSMFVYVVKMILL
VME1_CVRSD MSSTTPAPQTVYQWTADVAVRFLKEWNFLLGIILLFITIILQFGYTSRSMFIYVVKMIIL
VME1_CVMJH MSSTTQAPGPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSMFIYVVKMIIL
VME1_CVMA5 MSSTTQAPEPVYQWTADEAVQFLKEWNFSLGIILLFITIILQFGYTSRSMFIYVVKMIIL
VME1_CVP67 -MSSPTTPVPVISWTADEAIKFLKEWNFSLGIIVLFITIILQFGYTSRSMFVYVIKMVIL
VME1_CVPIA -MSSPTTPVPVISWTADEAIKFLKEWNFSLGIIVLFITIILQFGYTSRSMFVYVVKMVIL
VME1_CVHOC -MSSKTTPAPVYIWTADEAIKFLKEWNFSLGIILLFITIILQFGYTSRSMFVYVIKMIIL
VME1_CVBEN -MSSVTTPAPVYTWTADEAIKFLKEWNFSLGIILLFITVILQFGYTSRSMFVYVIKMVIL
VME1_CVBLU -MSSVTTPAPVYTWTADEAIKFLKEWNFSLGIILLFITVILQFGYTSRSMFVYVIKMIIL
VME1_CVBLY -MSSVTTPAPVYTWTADEAIKFLKEWNFSLGIILLFITIILQFGYTSRSMFVYVIKMIIL
VME1_CVBF -MSSVTTPAPVYTWTADEAIKFLKEWNFSLGIILLFITIILQFGYTSRSMFVYVIKMIIL
VME1_CVBM -MSSVTTPAPVYTWTADEAIKFLKEWNFSLGIILLFITIILQFGYTSRSMFVYVIKMIIL
VME1_CVBQ -MSSVTTPAPVYTWTADEAIKFLKEWNFSLGIILLFITIILQFGYTSRSMFVYVIKMIIL
VME1_CVBLS -MSSVTTPAPVYTWTADEAIKFLKEWNFSLGIILLFITVILQFGYTSRSMFVYVIKMIIL
VME1_CVBOK -MSSVTTPAPVYTWTADEAIKFLKEWNFSLGIILLFITVILQFGYTSRSMFVYVIKMIIL
:::**: ..:.* ::**:.*..* :::.*:..*
VME1_BC279 WLLWPVTLACFVLAAVYRINWVTGGIAIAMACIVGLMWLSYFVASFRLFARTRSMWSFNP
VME1_SARS WLLWPVTLACFVLAAVYRINWVTGGIAIAMACIVGLMWLSYFVASFRLFARTRSMWSFNP
VME1_BCRP3 WLLWPVTLACFVLAAVYRINWVTGGIAIAMACIVGLMWLSYFVASFRLFARTRSMWSFNP
VME1_BCHK3 WLLWPVTLACFVLAAVYRINWVTGGIAIAMACIVGLMWLSYFVASFRLFARTRSMWSFNP
VME1_BCHK9 WLLWPLSIAAAVFAAIHPINSVAFGFAIAFACISGIMWLSYFISSFRLLCRTGSAWSFMP
VME1_CVEMC WLLWPSSMALSIFSAVYPIDLASQIISGIVAAVSAMMWISYFVQSIRLFMRTGSWWSFNP
VME1_BCHK5 WLLWPASMALSIFCAVYPIDLASQIISGILAATSCAMWISYFVQSIRLFMRTGSWWSFNP
VME1_BCHK4 WLLWPASMALSIFSAIYPISLSSQIISGILAAICAVMWLAYFVQSIRLFMRTGSWWSFNP
VME1_BC133 WLLWPASMALSIFSAIYPISLASQIISGILAAICAVMWLAYFVQSIRLFMRTGSWWSFNP
VME1_CVHN1 WLMWPLTITLTIFNCFYALNNAFLAFSIVFTIISIVIWILYFVNSIRLFIRTGSWWSFNP
VME1_CVHN2 WLMWPLTIILTIFNCFYALNNIFLGLSILFTIISIVIWILYFVNSIRLFIRTGSWWSFNP
VME1_CVHN5 WLMWPLTIILTIFNCFYALNNVFLGLSILFTIISIVIWILYFVNSIRLFIRTGSWWSFNP
VME1_CVM2 WLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIIMWIMYFVNSIRLFIRTGSWWSFNP
VME1_CVRSD WLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVMWIMYFVNSIRLFIRTGSWWSFNP
VME1_CVMJH WLMWPLIIVLCMFNCVYALNNVYLGFSIVFTIVSVVMWIMYFVNSIRLFIRTGSWWSFNP
VME1_CVMA5 WLMWPLTIVLCIFNCVYALNNVYLGFSIVFTIVSIVIWIMYFVNSIRLFIRTGSWWSFNP
VME1_CVP67 WLMWPLTIILTIFNCVYALNNVYLGFSIVFTIVAIIMWVVYFVNSIRLFIRTGSWWSFNP
VME1_CVPIA WFMWPLTIILTIFNCVYALNNVYLGFSIVFTIVAIIMWVVYFVNSIRLFIRTGSWWSFNP
VME1_CVHOC WLMWPLTIILTIFNCVYALNNVYLGLSIVFTIVAIIMWIVYFVNSIRLFIRTGSFWSFNP
VME1_CVBEN WLMWPLTIILTIFNCVYALNNVYLGFSIVFTIVAIIMWIVYFVNSIRLFIRTGSWWSFNP
VME1_CVBLU WLMWPLTIILTIFNCVYALNNVYLGFSIVFTIVAIIMWIVYFVNSIRLFIRTGSWWSFNP
VME1_CVBLY WLMWPLTIILTIFNCVYALNNVYLGFSIVFTIVAIIMWIVYFVNSIRLFIRTGSWWSFNP
VME1_CVBF WLMWPLTIILTIFNCVYALNNVYLGFSIVFTIVAIIMWIVYFVNSIRLFIRTGSWWSFNP
VME1_CVBM WLMWPLTIILTIFNCVYALNNVYLGFSIVFTIVAIIMWIVYFVNSIRLFIRTGSWWSFNP
VME1_CVBQ WLMWPLTIILTIFNCVYALNNVYLGFSIVFTIVAIIMWIVYFVNSIRLFIRTGSWWSFNP
VME1_CVBLS WLMWPLTIILTIFNCVYALNNVYLGFSIVFTIVAIIMWIVYFVNSIRLFIRTGSWWSFNP
VME1_CVBOK WLMWPLTIILTIFNCVYALNNVYLGFSIVFTIVAIIMWIVYFVNSIRLFIRTGSWWSFNP
*::** : :: ..: :. :: .: :*: **: *:**: ** * *** *
VME1_BC279 ETNILLNVPLRGTILTRPLLESELVIGAVIIRGHLRMAGHSLGR-CDIKDLPKEITVATS
VME1_SARS ETNILLNVPLRGTIVTRPLMESELVIGAVIIRGHLRMAGHSLGR-CDIKDLPKEITVATS
VME1_BCRP3 ETNILLNVPLRGTILTRPLMESELVIGAVIIRGHLRMAGHSLGR-CDIKDLPKEITVATS
VME1_BCHK3 ETNILLNVPLRGTILTRPLMESELVIGAVIIRGHLRMAGHSLGR-CDIKDLPKEITVATS
VME1_BCHK9 ETDMLINIPLLGRTVTRPIISDSPAVQFLIIRGELRFDGFTLGR-CDPGDMPDIVTIARP
VME1_CVEMC ETNCLLNVPFGGTTVVRPLVEDSTSVTAVVTNGHLKMAGMHFGA-CDYDRLPNEVTVAKP
VME1_BCHK5 ESNCLLNVPIGGTTVVRPLVEDSTSVTAVVTDGYLKMAGMHFGA-CDFQRLPSEVTVAKP
VME1_BCHK4 ESNCLLNVPIGGTTVVRPLVEDSTSVTAVVNDGHLKMAGMHFGR-CDYDRLPMEITVAKP
VME1_BC133 ESNCLLNVPIGGTTVVRPLVEDSTSVTAVVNDGHLKMAGMHFGR-CDYDRLPMEITVAKP
VME1_CVHN1 ETNNLMCIDMKGKMFVRPVIEDYHTLTATVIRGHLYIQGVKLGTGYTLSDLPVYVTVAKV
VME1_CVHN2 ETNNLMCIDMKGKMYVRPVIEDYHTLTATVIRGHLYIQGVKLGTGYTLADLPVYVTVAKV
VME1_CVHN5 ETNNLMCIDMKGKMYVRPVIEDYHTLTATVIRGHLYIQGVKLGTGYTLADLPVYVTVAKV
VME1_CVM2 ETNNLMCTDMKGTVYVRPIIEDYHTLTATIIRGHLYMQGVKLGTGFSLSDLPAYVTVAKV
VME1_CVRSD ETNNLMCIDVKGTVYVRPIIEDYHTLTATNVRGHLYMQGVKLGTGFSLSDLPAYVTVAKV
VME1_CVMJH ETNNLMCIDMKGTVYVRPIIEDYHTLTATIIRGHFYMQGVKLGTGFSLSDLPAYVTVAKV
VME1_CVMA5 ETNNLMCIDMKGTVYVRPIIEDYHTLTATIIRGHLYMQGVKLGTGFSLSDLPAYVTVAKV
VME1_CVP67 ETNNLMCIDMKGRMYVRPIIEDYHTLTATIIRGHLYIQGIKLGTGYSLSDLPAYVTVAKV
VME1_CVPIA ETNNLMCIDMKGRMYVRPIIEDYHTLTATIIRGHLYIQGIKLGTGYSLSDLPAYVTVAKV
VME1_CVHOC ETNNLMCIDMKGTMYVRPIIEDYHTLTVTIIRGHLYIQGIKLGTGYSWADLPAYMTVAKV
VME1_CVBEN ETNNLMCIDMKGRMYVRPIIEDYHTLTVTIIRGHLYMQGIKLGTGYSLSDLPAYVTVAKV
VME1_CVBLU ETNNLMCIDMKGRMYVRPIIEDYHTLTVTIIRGHLYMQGIKLGTGYSLSDLPAYVTVAKV
VME1_CVBLY ETNNLMCIDMKGRMYVRPIIEDYHTLTVTIIRGHLYMQGIKLGTGYSLSDLPAYVTVAKV
VME1_CVBF ETNNLMCIDMKGRMYVRPIIEDYHTLTVTIIRGHLYMQGIKLGTGYSLSDLPAYVTVAKV
VME1_CVBM ETNNLMCIDMKGRMYVRPIIEDYHTLTVTIIRGHLYMQGIKLGTGYSLSDLPAYVTVAKV
VME1_CVBQ ETNNLMCIDMKGRMYVRPIIEDYHTLTVTIIRGHLYMQGIKLGTGYSLSDLPAYVTVAKV
VME1_CVBLS ETNNLMCIDMKGRMYVRPIIEDYHTLTVTIIRGHLYMQGIKLGTGYSLSDLPAYVTVAKV
VME1_CVBOK ETNNLMCIDMKGRMYVRPIIEDYHTLTVTIIRGHLYMQGIKLGTGYSLSDLPAYVTVAKV
*:: *: . * .**::.. : * : : * :* :* :*:*
VME1_BC279 RTLSYYKLGASQRVGNDSGFAAYNRYRIGNYKLNTDHSGSNDNIALLVQ--
VME1_SARS RTLSYYKLGASQRVGTDSGFAAYNRYRIGNYKLNTDHAGSNDNIALLVQ--
VME1_BCRP3 RTLSYYKLGASQRVGTDSGFAAYNRYRIGNYKLNTDHSGSNDNIALLVQ--
VME1_BCHK3 RTLSYYKLGASQRVGTDSGFAAYNRYRIGNYKLNTDHSGSNDNIALLVQ--
VME1_BCHK9 NALHWYKRALTRNMYTRSAILVYIKYKVGNHRVQN-TTEDGDRLAMFVA--
VME1_CVEMC NVLIALKMVKRQSYGTNSGVAIYHRYKAGNYRSPP--ITADIELALLRA--
VME1_BCHK5 NVLIALKMIKRQAYGTNSGVAIYHRYKAGNYRRPP--IIQDQELALLRA--
VME1_BCHK4 SVLIALKMVKRQSYGTNSGVAIFHRYKAGNYRRPT--IIQDEELALLRA--
VME1_BC133 SVLIALKMVKRQSYGTNSGVAIFHRYKAGNYRRPT--IIQDEELALLRA--
VME1_CVHN1 QVLCTYKRAFLDKLDVNSGFAVFVKSKVGNYRLPS-SKPSGMDTALLRA--
VME1_CVHN2 QVLCTYKRAFLDKLDVNSGFAVFVKSKVGNYRLPS-SKSSGMDTALLRA--
VME1_CVHN5 QVLCTYKRAFLDKLDVNSGFAVFVKSKVGNYRLPS-SKSSGMDTALLRA--
VME1_CVM2 SHLCTYKRAFLDKVDGVSGFAVYVKSKVGNYRLPS-NKPSGMDTALLRI--
VME1_CVRSD SHLCTYKRAFLDKVDGVSGFAVYVKSKVGNYRLPS-NKPSGADTALLRI--
VME1_CVMJH SHLCTYKRAFLDKVDGVSGFAVYVKSKVGNYRLPS-NKPSGADTVLLRI--
VME1_CVMA5 SHLCTYKRAFLDKVDGVSGFAVYVKSKVGNYRLPS-NKPSGADTALLRI--
VME1_CVP67 THLCTYKRGFLDRIGDTSGFAVYVKSKVGNYRLPSTHKGSGMDTALLRNNI
VME1_CVPIA THLCTYKRGFLDRIGDTSGFAVYVKSKVGNYRLPSTHKGSGMDTALLRNNI
VME1_CVHOC THLCTYKRGFLDRISDTSGFAVYVKSKVGNYRLPSTQKGSGMDTALLRNNI
VME1_CVBEN SHLLTYKRGFLDKIGDTSGFAVYVKSKVGNYRLPSTQKGSGLDTALLRNNI
VME1_CVBLU SHLLTYKRGFLDKIGDTSGFAVYVKSKVGNYRLPSTQKGSGLDTALLRNNI
VME1_CVBLY SHLLTYKRGFLDRIGDTSGFAVYVKSKVGNYRLPSTQKGSGMDTALLRNNI
VME1_CVBF SHLLTYKRGFLDKIGDTSGFAVYVKSKVGNYRLPSTQKGSGMDTALLRNNI
VME1_CVBM SHLLTYKRGFLDKIGDTSGFAVYVKSKVGNYRLPSTQKGSGMDTALLRNNI
VME1_CVBQ SHLLTYKRGFLDKIGDTSGFAVYVKSKVGNYRLPSTQKGSGMDTALLRNNI
VME1_CVBLS SHLLTYKRGFLDKIGDTSGFAVYVKSKVGNYRLPSTQKGSGMDTALLRNNI
VME1_CVBOK SHLLTYKRGFLDKIGDTSGFAVYVKSKVGNYRLPSTQKGSGMDTALLRNNI
* * *.. : . . **:. . .::