CONSTRUCT { _:15917 up:source unirule:MF_00039 . _:15918 up:source unirule:MF_00039 . _:15919 up:source unirule:MF_00039 . _:15920 up:source unirule:MF_00039 . _:15921 up:source unirule:MF_00039 . _:15922 up:source unirule:MF_00039 . _:15923 up:source unirule:MF_00039 . _:15924 up:source unirule:MF_00039 . _:15925 up:source unirule:MF_00039 . _:15926 up:source unirule:MF_00039 . _:15927 up:source unirule:MF_00039 . _:15928 up:source unirule:MF_00039 . _:15929 up:source unirule:MF_00039 . _:15930 up:source unirule:MF_00039 . _:15931 up:source unirule:MF_00039 . _:15932 up:source unirule:MF_00039 . _:15933 up:source unirule:MF_00039 . _:15934 up:source unirule:MF_00039 . _:15935 up:source unirule:MF_00039 . _:15936 up:source unirule:MF_00039 . _:15937 up:source unirule:MF_00039 . _:15938 up:source unirule:MF_00039 . _:15939 up:source unirule:MF_00039 . _:15940 up:source unirule:MF_00039 . _:15941 up:source unirule:MF_00039 . ?this up:alternativeName ?name1 ; up:annotation ?annotation2 , ?annotation3 , ?annotation5 , ?annotation7 , ?annotation8 ; up:classifiedWith GO:0004017 , GO:0005524 , GO:0042274 , keyword:418 , keyword:547 , keyword:67 , keyword:690 , keyword:698 , keyword:808 ; up:recommendedName ?name0 . ?name0 up:ecName '2.7.4.3' ; up:fullName 'Putative adenylate kinase' ; up:shortName 'AK' ; rdf:type up:Structured_Name . ?name1 up:fullName 'ATP-AMP transphosphorylase' ; rdf:type up:Structured_Name . ?annotation2 a up:Function_Annotation ; rdfs:comment 'Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity. Involved in the late maturation steps of the 30S ribosomal particles, specifically 16S rRNA maturation. While NMP activity is not required for ribosome maturation, ATPase activity is. Associates transiently with small ribosomal subunit protein uS11. ATP hydrolysis breaks the interaction with uS11. May temporarily remove uS11 from the ribosome to enable a conformational change of the ribosomal RNA that is needed for the final maturation step of the small ribosomal subunit.' . ?annotation3 up:activity ?activity4 ; rdf:type up:Catalytic_Activity_Annotation . ?activity4 up:catalyticActivity <http://rdf.rhea-db.org/12973>; up:enzymeClass <http://purl.uniprot.org/enzyme/2.7.4.3>. ?annotation5 up:activity ?activity6 ; rdf:type up:Catalytic_Activity_Annotation . ?activity6 up:catalyticActivity <http://rdf.rhea-db.org/13065>. ?annotation7 a up:Subunit_Annotation ; rdfs:comment 'Interacts with uS11. Not a structural component of 40S pre-ribosomes, but transiently interacts with them by binding to uS11.' . ?annotation8 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the adenylate kinase family. AK6 subfamily.' . ?pfs9 up:annotation ?annotation10 . ?annotation10 faldo:begin ?pfsb11 ; faldo:end ?pfse12 ; rdf:type up:Region_Annotation ; rdfs:comment 'NMP' . ?pfsb11 faldo:position ?thisPositionOn13 ; rdf:type faldo:ExactPosition . ?pfse12 faldo:position ?thisPositionOn14 ; rdf:type faldo:ExactPosition . ?pfs15 up:annotation ?annotation16 . ?annotation16 faldo:begin ?pfsb17 ; faldo:end ?pfse18 ; rdf:type up:Region_Annotation ; rdfs:comment 'LID' . ?pfsb17 faldo:position ?thisPositionOn19 ; rdf:type faldo:ExactPosition . ?pfse18 faldo:position ?thisPositionOn20 ; rdf:type faldo:ExactPosition . ?pfs21 up:annotation ?annotation22 . ?annotation22 faldo:begin ?pfsb23 ; faldo:end ?pfse24 ; up:ligand ?ligand25 ; rdf:type up:Binding_Site_Annotation . ?pfsb23 faldo:position ?thisPositionOn26 ; rdf:type faldo:ExactPosition . ?pfse24 faldo:position ?thisPositionOn27 ; rdf:type faldo:ExactPosition . ?ligand25 rdfs:subClassOf chebi:30616 . ?pfs28 up:annotation ?annotation29 . ?annotation29 faldo:begin ?pfsb30 ; faldo:end ?pfse31 ; up:ligand ?ligand32 ; rdf:type up:Binding_Site_Annotation . ?pfsb30 faldo:position ?thisPositionOn33 ; rdf:type faldo:ExactPosition . ?pfse31 faldo:position ?thisPositionOn34 ; rdf:type faldo:ExactPosition . ?ligand32 rdfs:subClassOf chebi:30616 . ?pfs35 up:annotation ?annotation36 . ?annotation36 faldo:begin ?pfsb37 ; faldo:end ?pfse38 ; up:ligand ?ligand39 ; rdf:type up:Binding_Site_Annotation . ?pfsb37 faldo:position ?thisPositionOn40 ; rdf:type faldo:ExactPosition . ?pfse38 faldo:position ?thisPositionOn41 ; rdf:type faldo:ExactPosition . ?ligand39 rdfs:subClassOf chebi:30616 . ?pfs42 up:annotation ?annotation43 . ?annotation43 faldo:begin ?pfsb44 ; faldo:end ?pfse45 ; up:ligand ?ligand46 ; rdf:type up:Binding_Site_Annotation . ?pfsb44 faldo:position ?thisPositionOn47 ; rdf:type faldo:ExactPosition . ?pfse45 faldo:position ?thisPositionOn48 ; rdf:type faldo:ExactPosition . ?ligand46 rdfs:subClassOf chebi:30616 . ?pfs49 up:annotation ?annotation50 . ?annotation50 faldo:begin ?pfsb51 ; faldo:end ?pfse52 ; up:ligand ?ligand53 ; rdf:type up:Binding_Site_Annotation . ?pfsb51 faldo:position ?thisPositionOn54 ; rdf:type faldo:ExactPosition . ?pfse52 faldo:position ?thisPositionOn55 ; rdf:type faldo:ExactPosition . ?ligand53 rdfs:subClassOf chebi:30616 . ?pfs56 up:annotation ?annotation57 . ?annotation57 faldo:begin ?pfsb58 ; faldo:end ?pfse59 ; up:ligand ?ligand60 ; rdf:type up:Binding_Site_Annotation . ?pfsb58 faldo:position ?thisPositionOn61 ; rdf:type faldo:ExactPosition . ?pfse59 faldo:position ?thisPositionOn62 ; rdf:type faldo:ExactPosition . ?ligand60 rdfs:subClassOf chebi:30616 . ?pfs63 up:annotation ?annotation64 . ?annotation64 faldo:begin ?pfsb65 ; faldo:end ?pfse66 ; up:ligand ?ligand67 ; rdf:type up:Binding_Site_Annotation . ?pfsb65 faldo:position ?thisPositionOn68 ; rdf:type faldo:ExactPosition . ?pfse66 faldo:position ?thisPositionOn69 ; rdf:type faldo:ExactPosition . ?ligand67 rdfs:subClassOf chebi:30616 . _:15942 a rdf:Statement ; up:attribution _:15917 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:15943 a rdf:Statement ; up:attribution _:15918 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name1 . _:15944 a rdf:Statement ; up:attribution _:15919 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:15945 a rdf:Statement ; up:attribution _:15920 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:15946 a rdf:Statement ; up:attribution _:15921 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:15947 a rdf:Statement ; up:attribution _:15922 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:15948 a rdf:Statement ; up:attribution _:15923 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation8 . _:15949 a rdf:Statement ; up:attribution _:15924 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:67 . _:15950 a rdf:Statement ; up:attribution _:15925 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:547 . _:15951 a rdf:Statement ; up:attribution _:15926 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:418 . _:15952 a rdf:Statement ; up:attribution _:15927 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:808 . _:15953 a rdf:Statement ; up:attribution _:15928 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:690 . _:15954 a rdf:Statement ; up:attribution _:15929 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:698 . _:15955 a rdf:Statement ; up:attribution _:15930 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0004017 . _:15956 a rdf:Statement ; up:attribution _:15931 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005524 . _:15957 a rdf:Statement ; up:attribution _:15932 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0042274 . _:15958 a rdf:Statement ; up:source unirule:MF_00039 ; rdf:subject ?pfs9 ; rdf:predicate up:annotation ; rdf:object ?annotation10 . _:15959 a rdf:Statement ; up:attribution _:15933 ; rdf:subject ?pfs9 ; rdf:predicate up:annotation ; rdf:object ?annotation10 . _:15960 a rdf:Statement ; up:source unirule:MF_00039 ; rdf:subject ?pfs15 ; rdf:predicate up:annotation ; rdf:object ?annotation16 . _:15961 a rdf:Statement ; up:attribution _:15934 ; rdf:subject ?pfs15 ; rdf:predicate up:annotation ; rdf:object ?annotation16 . _:15962 a rdf:Statement ; up:source unirule:MF_00039 ; rdf:subject ?pfs21 ; rdf:predicate up:annotation ; rdf:object ?annotation22 . _:15963 a rdf:Statement ; up:attribution _:15935 ; rdf:subject ?pfs21 ; rdf:predicate up:annotation ; rdf:object ?annotation22 . _:15964 a rdf:Statement ; up:source unirule:MF_00039 ; rdf:subject ?pfs28 ; rdf:predicate up:annotation ; rdf:object ?annotation29 . _:15965 a rdf:Statement ; up:attribution _:15936 ; rdf:subject ?pfs28 ; rdf:predicate up:annotation ; rdf:object ?annotation29 . _:15966 a rdf:Statement ; up:source unirule:MF_00039 ; rdf:subject ?pfs35 ; rdf:predicate up:annotation ; rdf:object ?annotation36 . _:15967 a rdf:Statement ; up:attribution _:15937 ; rdf:subject ?pfs35 ; rdf:predicate up:annotation ; rdf:object ?annotation36 . _:15968 a rdf:Statement ; up:source unirule:MF_00039 ; rdf:subject ?pfs42 ; rdf:predicate up:annotation ; rdf:object ?annotation43 . _:15969 a rdf:Statement ; up:attribution _:15938 ; rdf:subject ?pfs42 ; rdf:predicate up:annotation ; rdf:object ?annotation43 . _:15970 a rdf:Statement ; up:source unirule:MF_00039 ; rdf:subject ?pfs49 ; rdf:predicate up:annotation ; rdf:object ?annotation50 . _:15971 a rdf:Statement ; up:attribution _:15939 ; rdf:subject ?pfs49 ; rdf:predicate up:annotation ; rdf:object ?annotation50 . _:15972 a rdf:Statement ; up:source unirule:MF_00039 ; rdf:subject ?pfs56 ; rdf:predicate up:annotation ; rdf:object ?annotation57 . _:15973 a rdf:Statement ; up:attribution _:15940 ; rdf:subject ?pfs56 ; rdf:predicate up:annotation ; rdf:object ?annotation57 . _:15974 a rdf:Statement ; up:source unirule:MF_00039 ; rdf:subject ?pfs63 ; rdf:predicate up:annotation ; rdf:object ?annotation64 . _:15975 a rdf:Statement ; up:attribution _:15941 ; rdf:subject ?pfs63 ; rdf:predicate up:annotation ; rdf:object ?annotation64 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00039 #Rule MF_00039 Created by:? on:2005-02-28 Modified by:Catherine Rivoire on:2025-06-12 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00039 . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(URI(CONCAT(STR(?this), '#MF_00039a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_00039a1')) AS ?name1) . BIND(URI(CONCAT(STR(?this), '#MF_00039a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_00039a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_00039a5')) AS ?annotation5) . BIND(URI(CONCAT(STR(?this), '#MF_00039a7')) AS ?annotation7) . BIND(URI(CONCAT(STR(?this), '#MF_00039a8')) AS ?annotation8) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch74 faldo:location ?templateMotifSequenceMatchRegionQ9UZK475 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9UZK477 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9UZK4MF_0003970 . ?templateMotifSequenceMatchRegionQ9UZK475 faldo:begin ?templateMotifSequenceMatchBeginQ9UZK476 . ?templateMotifSequenceMatchBeginQ9UZK476 faldo:position ?templateMotifSequenceMatchBeginPositionQ9UZK471 ; faldo:reference isoform:Q9UZK4-1 . ?templateMotifSequenceProfileAlignmentOperationQ9UZK477 edam:has_input signature:MF_00039 ; rdf:type edam:operation_0300 . ?targetMotifMatch78 faldo:location ?targetMotifMatchRegionMatch79 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0003981 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9UZK4MF_0003972 . ?targetMotifMatchRegionMatch79 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0003980 . ?targetMotifMatchRegionMatchBeginMF_0003980 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0003973 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0003981 edam:has_input signature:MF_00039 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9UZK4MF_0003970, 1, (STRLEN(?templateMotifCigarQ9UZK4MF_0003970) - STRLEN(REPLACE(?templateMotifCigarQ9UZK4MF_0003970, CONCAT('^(?:-*[^-]){', STR(((30 - ?templateMotifSequenceMatchBeginPositionQ9UZK471) + 1)), '}'), '')))), '[a-z]', '')) AS ?step182) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9UZK4MF_0003972, 1, (STRLEN(?targetMotifMatchCigarQ9UZK4MF_0003972) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UZK4MF_0003972, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step182), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9UZK4MF_0003972, 1, (STRLEN(?targetMotifMatchCigarQ9UZK4MF_0003972) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UZK4MF_0003972, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step182), '}'), '')))), '[^-]', ''))) AS ?step283) . BIND(((?step283 + ?targetMotifMatchRegionMatchBeginPositionMF_0003973) - 1) AS ?thisPositionOn13) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9UZK4MF_0003970, 1, (STRLEN(?templateMotifCigarQ9UZK4MF_0003970) - STRLEN(REPLACE(?templateMotifCigarQ9UZK4MF_0003970, CONCAT('^(?:-*[^-]){', STR(((50 - ?templateMotifSequenceMatchBeginPositionQ9UZK471) + 1)), '}'), '')))), '[a-z]', '')) AS ?step184) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9UZK4MF_0003972, 1, (STRLEN(?targetMotifMatchCigarQ9UZK4MF_0003972) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UZK4MF_0003972, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step184), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9UZK4MF_0003972, 1, (STRLEN(?targetMotifMatchCigarQ9UZK4MF_0003972) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UZK4MF_0003972, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step184), '}'), '')))), '[^-]', ''))) AS ?step285) . BIND(((?step285 + ?targetMotifMatchRegionMatchBeginPositionMF_0003973) - 1) AS ?thisPositionOn14) . BIND(?this AS ?pfs1t86) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfsb11) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn14))) AS ?pfse12) . FILTER ((BOUND(?thisPositionOn13) && BOUND(?thisPositionOn14))) . BIND(URI(CONCAT(STR(?this), '#MF_00039a10')) AS ?annotation10) . BIND(?this AS ?pfs9) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch91 faldo:location ?templateMotifSequenceMatchRegionQ9UZK492 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9UZK494 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9UZK4MF_0003987 . ?templateMotifSequenceMatchRegionQ9UZK492 faldo:begin ?templateMotifSequenceMatchBeginQ9UZK493 . ?templateMotifSequenceMatchBeginQ9UZK493 faldo:position ?templateMotifSequenceMatchBeginPositionQ9UZK488 ; faldo:reference isoform:Q9UZK4-1 . ?templateMotifSequenceProfileAlignmentOperationQ9UZK494 edam:has_input signature:MF_00039 ; rdf:type edam:operation_0300 . ?targetMotifMatch95 faldo:location ?targetMotifMatchRegionMatch96 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0003998 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9UZK4MF_0003989 . ?targetMotifMatchRegionMatch96 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0003997 . ?targetMotifMatchRegionMatchBeginMF_0003997 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0003990 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0003998 edam:has_input signature:MF_00039 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9UZK4MF_0003987, 1, (STRLEN(?templateMotifCigarQ9UZK4MF_0003987) - STRLEN(REPLACE(?templateMotifCigarQ9UZK4MF_0003987, CONCAT('^(?:-*[^-]){', STR(((99 - ?templateMotifSequenceMatchBeginPositionQ9UZK488) + 1)), '}'), '')))), '[a-z]', '')) AS ?step199) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9UZK4MF_0003989, 1, (STRLEN(?targetMotifMatchCigarQ9UZK4MF_0003989) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UZK4MF_0003989, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step199), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9UZK4MF_0003989, 1, (STRLEN(?targetMotifMatchCigarQ9UZK4MF_0003989) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UZK4MF_0003989, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step199), '}'), '')))), '[^-]', ''))) AS ?step2100) . BIND(((?step2100 + ?targetMotifMatchRegionMatchBeginPositionMF_0003990) - 1) AS ?thisPositionOn19) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9UZK4MF_0003987, 1, (STRLEN(?templateMotifCigarQ9UZK4MF_0003987) - STRLEN(REPLACE(?templateMotifCigarQ9UZK4MF_0003987, CONCAT('^(?:-*[^-]){', STR(((109 - ?templateMotifSequenceMatchBeginPositionQ9UZK488) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1101) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9UZK4MF_0003989, 1, (STRLEN(?targetMotifMatchCigarQ9UZK4MF_0003989) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UZK4MF_0003989, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1101), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9UZK4MF_0003989, 1, (STRLEN(?targetMotifMatchCigarQ9UZK4MF_0003989) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UZK4MF_0003989, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1101), '}'), '')))), '[^-]', ''))) AS ?step2102) . BIND(((?step2102 + ?targetMotifMatchRegionMatchBeginPositionMF_0003990) - 1) AS ?thisPositionOn20) . BIND(?this AS ?pfs1t103) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfsb17) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn20))) AS ?pfse18) . FILTER ((BOUND(?thisPositionOn19) && BOUND(?thisPositionOn20))) . BIND(URI(CONCAT(STR(?this), '#MF_00039a16')) AS ?annotation16) . BIND(?this AS ?pfs15) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch108 faldo:location ?templateMotifSequenceMatchRegionQ9UZK4109 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9UZK4111 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9UZK4MF_00039104 . ?templateMotifSequenceMatchRegionQ9UZK4109 faldo:begin ?templateMotifSequenceMatchBeginQ9UZK4110 . ?templateMotifSequenceMatchBeginQ9UZK4110 faldo:position ?templateMotifSequenceMatchBeginPositionQ9UZK4105 ; faldo:reference isoform:Q9UZK4-1 . ?templateMotifSequenceProfileAlignmentOperationQ9UZK4111 edam:has_input signature:MF_00039 ; rdf:type edam:operation_0300 . ?targetMotifMatch112 faldo:location ?targetMotifMatchRegionMatch113 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00039115 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9UZK4MF_00039106 . ?targetMotifMatchRegionMatch113 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00039114 . ?targetMotifMatchRegionMatchBeginMF_00039114 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00039107 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00039115 edam:has_input signature:MF_00039 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9UZK4MF_00039104, 1, (STRLEN(?templateMotifCigarQ9UZK4MF_00039104) - STRLEN(REPLACE(?templateMotifCigarQ9UZK4MF_00039104, CONCAT('^(?:-*[^-]){', STR(((10 - ?templateMotifSequenceMatchBeginPositionQ9UZK4105) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1116) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9UZK4MF_00039106, 1, (STRLEN(?targetMotifMatchCigarQ9UZK4MF_00039106) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UZK4MF_00039106, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1116), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9UZK4MF_00039106, 1, (STRLEN(?targetMotifMatchCigarQ9UZK4MF_00039106) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UZK4MF_00039106, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1116), '}'), '')))), '[^-]', ''))) AS ?step2117) . BIND(((?step2117 + ?targetMotifMatchRegionMatchBeginPositionMF_00039107) - 1) AS ?thisPositionOn26) . BIND(?thisPositionOn26 AS ?thisPositionOn27) . BIND(?this AS ?pfs1t118) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn26))) AS ?pfsb23) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn27))) AS ?pfse24) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn26, 1) = 'G')) . BIND(URI(CONCAT(STR(?this), '#MF_00039a22')) AS ?annotation22) . BIND(?this AS ?pfs21) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch123 faldo:location ?templateMotifSequenceMatchRegionQ9UZK4124 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9UZK4126 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9UZK4MF_00039119 . ?templateMotifSequenceMatchRegionQ9UZK4124 faldo:begin ?templateMotifSequenceMatchBeginQ9UZK4125 . ?templateMotifSequenceMatchBeginQ9UZK4125 faldo:position ?templateMotifSequenceMatchBeginPositionQ9UZK4120 ; faldo:reference isoform:Q9UZK4-1 . ?templateMotifSequenceProfileAlignmentOperationQ9UZK4126 edam:has_input signature:MF_00039 ; rdf:type edam:operation_0300 . ?targetMotifMatch127 faldo:location ?targetMotifMatchRegionMatch128 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00039130 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9UZK4MF_00039121 . ?targetMotifMatchRegionMatch128 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00039129 . ?targetMotifMatchRegionMatchBeginMF_00039129 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00039122 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00039130 edam:has_input signature:MF_00039 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9UZK4MF_00039119, 1, (STRLEN(?templateMotifCigarQ9UZK4MF_00039119) - STRLEN(REPLACE(?templateMotifCigarQ9UZK4MF_00039119, CONCAT('^(?:-*[^-]){', STR(((12 - ?templateMotifSequenceMatchBeginPositionQ9UZK4120) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1131) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9UZK4MF_00039121, 1, (STRLEN(?targetMotifMatchCigarQ9UZK4MF_00039121) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UZK4MF_00039121, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1131), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9UZK4MF_00039121, 1, (STRLEN(?targetMotifMatchCigarQ9UZK4MF_00039121) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UZK4MF_00039121, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1131), '}'), '')))), '[^-]', ''))) AS ?step2132) . BIND(((?step2132 + ?targetMotifMatchRegionMatchBeginPositionMF_00039122) - 1) AS ?thisPositionOn33) . BIND(?thisPositionOn33 AS ?thisPositionOn34) . BIND(?this AS ?pfs1t133) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfsb30) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn34))) AS ?pfse31) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn33, 1) = 'G')) . BIND(URI(CONCAT(STR(?this), '#MF_00039a29')) AS ?annotation29) . BIND(?this AS ?pfs28) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch138 faldo:location ?templateMotifSequenceMatchRegionQ9UZK4139 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9UZK4141 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9UZK4MF_00039134 . ?templateMotifSequenceMatchRegionQ9UZK4139 faldo:begin ?templateMotifSequenceMatchBeginQ9UZK4140 . ?templateMotifSequenceMatchBeginQ9UZK4140 faldo:position ?templateMotifSequenceMatchBeginPositionQ9UZK4135 ; faldo:reference isoform:Q9UZK4-1 . ?templateMotifSequenceProfileAlignmentOperationQ9UZK4141 edam:has_input signature:MF_00039 ; rdf:type edam:operation_0300 . ?targetMotifMatch142 faldo:location ?targetMotifMatchRegionMatch143 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00039145 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9UZK4MF_00039136 . ?targetMotifMatchRegionMatch143 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00039144 . ?targetMotifMatchRegionMatchBeginMF_00039144 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00039137 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00039145 edam:has_input signature:MF_00039 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9UZK4MF_00039134, 1, (STRLEN(?templateMotifCigarQ9UZK4MF_00039134) - STRLEN(REPLACE(?templateMotifCigarQ9UZK4MF_00039134, CONCAT('^(?:-*[^-]){', STR(((13 - ?templateMotifSequenceMatchBeginPositionQ9UZK4135) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1146) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9UZK4MF_00039136, 1, (STRLEN(?targetMotifMatchCigarQ9UZK4MF_00039136) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UZK4MF_00039136, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1146), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9UZK4MF_00039136, 1, (STRLEN(?targetMotifMatchCigarQ9UZK4MF_00039136) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UZK4MF_00039136, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1146), '}'), '')))), '[^-]', ''))) AS ?step2147) . BIND(((?step2147 + ?targetMotifMatchRegionMatchBeginPositionMF_00039137) - 1) AS ?thisPositionOn40) . BIND(?thisPositionOn40 AS ?thisPositionOn41) . BIND(?this AS ?pfs1t148) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfsb37) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn41))) AS ?pfse38) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn40, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_00039a36')) AS ?annotation36) . BIND(?this AS ?pfs35) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch153 faldo:location ?templateMotifSequenceMatchRegionQ9UZK4154 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9UZK4156 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9UZK4MF_00039149 . ?templateMotifSequenceMatchRegionQ9UZK4154 faldo:begin ?templateMotifSequenceMatchBeginQ9UZK4155 . ?templateMotifSequenceMatchBeginQ9UZK4155 faldo:position ?templateMotifSequenceMatchBeginPositionQ9UZK4150 ; faldo:reference isoform:Q9UZK4-1 . ?templateMotifSequenceProfileAlignmentOperationQ9UZK4156 edam:has_input signature:MF_00039 ; rdf:type edam:operation_0300 . ?targetMotifMatch157 faldo:location ?targetMotifMatchRegionMatch158 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00039160 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9UZK4MF_00039151 . ?targetMotifMatchRegionMatch158 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00039159 . ?targetMotifMatchRegionMatchBeginMF_00039159 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00039152 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00039160 edam:has_input signature:MF_00039 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9UZK4MF_00039149, 1, (STRLEN(?templateMotifCigarQ9UZK4MF_00039149) - STRLEN(REPLACE(?templateMotifCigarQ9UZK4MF_00039149, CONCAT('^(?:-*[^-]){', STR(((14 - ?templateMotifSequenceMatchBeginPositionQ9UZK4150) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1161) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9UZK4MF_00039151, 1, (STRLEN(?targetMotifMatchCigarQ9UZK4MF_00039151) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UZK4MF_00039151, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1161), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9UZK4MF_00039151, 1, (STRLEN(?targetMotifMatchCigarQ9UZK4MF_00039151) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UZK4MF_00039151, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1161), '}'), '')))), '[^-]', ''))) AS ?step2162) . BIND(((?step2162 + ?targetMotifMatchRegionMatchBeginPositionMF_00039152) - 1) AS ?thisPositionOn47) . BIND(?thisPositionOn47 AS ?thisPositionOn48) . BIND(?this AS ?pfs1t163) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn47))) AS ?pfsb44) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn48))) AS ?pfse45) . FILTER (REGEX('[ST]', SUBSTR(?thisSequenceValue, ?thisPositionOn47, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_00039a43')) AS ?annotation43) . BIND(?this AS ?pfs42) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch168 faldo:location ?templateMotifSequenceMatchRegionQ9UZK4169 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9UZK4171 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9UZK4MF_00039164 . ?templateMotifSequenceMatchRegionQ9UZK4169 faldo:begin ?templateMotifSequenceMatchBeginQ9UZK4170 . ?templateMotifSequenceMatchBeginQ9UZK4170 faldo:position ?templateMotifSequenceMatchBeginPositionQ9UZK4165 ; faldo:reference isoform:Q9UZK4-1 . ?templateMotifSequenceProfileAlignmentOperationQ9UZK4171 edam:has_input signature:MF_00039 ; rdf:type edam:operation_0300 . ?targetMotifMatch172 faldo:location ?targetMotifMatchRegionMatch173 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00039175 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9UZK4MF_00039166 . ?targetMotifMatchRegionMatch173 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00039174 . ?targetMotifMatchRegionMatchBeginMF_00039174 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00039167 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00039175 edam:has_input signature:MF_00039 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9UZK4MF_00039164, 1, (STRLEN(?templateMotifCigarQ9UZK4MF_00039164) - STRLEN(REPLACE(?templateMotifCigarQ9UZK4MF_00039164, CONCAT('^(?:-*[^-]){', STR(((15 - ?templateMotifSequenceMatchBeginPositionQ9UZK4165) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1176) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9UZK4MF_00039166, 1, (STRLEN(?targetMotifMatchCigarQ9UZK4MF_00039166) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UZK4MF_00039166, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1176), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9UZK4MF_00039166, 1, (STRLEN(?targetMotifMatchCigarQ9UZK4MF_00039166) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UZK4MF_00039166, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1176), '}'), '')))), '[^-]', ''))) AS ?step2177) . BIND(((?step2177 + ?targetMotifMatchRegionMatchBeginPositionMF_00039167) - 1) AS ?thisPositionOn54) . BIND(?thisPositionOn54 AS ?thisPositionOn55) . BIND(?this AS ?pfs1t178) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn54))) AS ?pfsb51) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn55))) AS ?pfse52) . FILTER (REGEX('[STIVY]', SUBSTR(?thisSequenceValue, ?thisPositionOn54, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_00039a50')) AS ?annotation50) . BIND(?this AS ?pfs49) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch183 faldo:location ?templateMotifSequenceMatchRegionQ9UZK4184 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9UZK4186 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9UZK4MF_00039179 . ?templateMotifSequenceMatchRegionQ9UZK4184 faldo:begin ?templateMotifSequenceMatchBeginQ9UZK4185 . ?templateMotifSequenceMatchBeginQ9UZK4185 faldo:position ?templateMotifSequenceMatchBeginPositionQ9UZK4180 ; faldo:reference isoform:Q9UZK4-1 . ?templateMotifSequenceProfileAlignmentOperationQ9UZK4186 edam:has_input signature:MF_00039 ; rdf:type edam:operation_0300 . ?targetMotifMatch187 faldo:location ?targetMotifMatchRegionMatch188 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00039190 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9UZK4MF_00039181 . ?targetMotifMatchRegionMatch188 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00039189 . ?targetMotifMatchRegionMatchBeginMF_00039189 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00039182 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00039190 edam:has_input signature:MF_00039 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9UZK4MF_00039179, 1, (STRLEN(?templateMotifCigarQ9UZK4MF_00039179) - STRLEN(REPLACE(?templateMotifCigarQ9UZK4MF_00039179, CONCAT('^(?:-*[^-]){', STR(((100 - ?templateMotifSequenceMatchBeginPositionQ9UZK4180) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1191) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9UZK4MF_00039181, 1, (STRLEN(?targetMotifMatchCigarQ9UZK4MF_00039181) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UZK4MF_00039181, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1191), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9UZK4MF_00039181, 1, (STRLEN(?targetMotifMatchCigarQ9UZK4MF_00039181) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UZK4MF_00039181, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1191), '}'), '')))), '[^-]', ''))) AS ?step2192) . BIND(((?step2192 + ?targetMotifMatchRegionMatchBeginPositionMF_00039182) - 1) AS ?thisPositionOn61) . BIND(?thisPositionOn61 AS ?thisPositionOn62) . BIND(?this AS ?pfs1t193) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn61))) AS ?pfsb58) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn62))) AS ?pfse59) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn61, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_00039a57')) AS ?annotation57) . BIND(?this AS ?pfs56) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch198 faldo:location ?templateMotifSequenceMatchRegionQ9UZK4199 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9UZK4201 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9UZK4MF_00039194 . ?templateMotifSequenceMatchRegionQ9UZK4199 faldo:begin ?templateMotifSequenceMatchBeginQ9UZK4200 . ?templateMotifSequenceMatchBeginQ9UZK4200 faldo:position ?templateMotifSequenceMatchBeginPositionQ9UZK4195 ; faldo:reference isoform:Q9UZK4-1 . ?templateMotifSequenceProfileAlignmentOperationQ9UZK4201 edam:has_input signature:MF_00039 ; rdf:type edam:operation_0300 . ?targetMotifMatch202 faldo:location ?targetMotifMatchRegionMatch203 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00039205 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9UZK4MF_00039196 . ?targetMotifMatchRegionMatch203 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00039204 . ?targetMotifMatchRegionMatchBeginMF_00039204 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00039197 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00039205 edam:has_input signature:MF_00039 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9UZK4MF_00039194, 1, (STRLEN(?templateMotifCigarQ9UZK4MF_00039194) - STRLEN(REPLACE(?templateMotifCigarQ9UZK4MF_00039194, CONCAT('^(?:-*[^-]){', STR(((138 - ?templateMotifSequenceMatchBeginPositionQ9UZK4195) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1206) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9UZK4MF_00039196, 1, (STRLEN(?targetMotifMatchCigarQ9UZK4MF_00039196) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UZK4MF_00039196, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1206), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9UZK4MF_00039196, 1, (STRLEN(?targetMotifMatchCigarQ9UZK4MF_00039196) - STRLEN(REPLACE(?targetMotifMatchCigarQ9UZK4MF_00039196, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1206), '}'), '')))), '[^-]', ''))) AS ?step2207) . BIND(((?step2207 + ?targetMotifMatchRegionMatchBeginPositionMF_00039197) - 1) AS ?thisPositionOn68) . BIND(?thisPositionOn68 AS ?thisPositionOn69) . BIND(?this AS ?pfs1t208) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn68))) AS ?pfsb65) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn69))) AS ?pfse66) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn68, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_00039a64')) AS ?annotation64) . BIND(?this AS ?pfs63) . } }