CONSTRUCT { _:87477 up:source unirule:MF_00209 . _:87478 up:source unirule:MF_00209 . _:87479 up:source unirule:MF_00209 . _:87480 up:source unirule:MF_00209 . _:87481 up:source unirule:MF_00209 . _:87482 up:source unirule:MF_00209 . _:87483 up:source unirule:MF_00209 . _:87484 up:source unirule:MF_00209 . _:87485 up:source unirule:MF_00209 . _:87486 up:source unirule:MF_00209 . _:87487 up:source unirule:MF_00209 . _:87488 up:source unirule:MF_00209 . _:87489 up:source unirule:MF_00209 . _:87490 up:source unirule:MF_00209 . _:87491 up:source unirule:MF_00209 . _:87492 up:source unirule:MF_00209 . _:87493 up:source unirule:MF_00209 . _:87494 up:source unirule:MF_00209 . _:87495 up:source unirule:MF_00209 . _:87496 up:source unirule:MF_00209 . _:87497 up:source unirule:MF_00209 . _:87498 up:source unirule:MF_00209 . _:87499 up:source unirule:MF_00209 . _:87500 up:source unirule:MF_00209 . _:87501 up:source unirule:MF_00209 . _:87502 up:source unirule:MF_00209 . _:87503 up:source unirule:MF_00209 . _:87504 up:source unirule:MF_00209 . _:87505 up:source unirule:MF_00209 . _:87506 up:source unirule:MF_00209 . _:87507 up:source unirule:MF_00209 . _:87508 up:source unirule:MF_00209 . ?this up:alternativeName ?name1 ; up:annotation ?annotation3 , ?annotation4 , ?annotation6 , ?annotation7 , ?annotation8 , ?annotation10 ; up:classifiedWith GO:0000287 , GO:0004427 , GO:0005737 , keyword:378 , keyword:460 , keyword:479 , keyword:963 ; up:recommendedName ?name0 . ?name0 up:ecName '3.6.1.1' ; up:fullName 'Inorganic pyrophosphatase' ; rdf:type up:Structured_Name . ?name1 up:fullName 'Pyrophosphate phospho-hydrolase' ; up:shortName 'PPase' ; rdf:type up:Structured_Name . ?gene2 skos:prefLabel 'ppa' . ?annotation3 a up:Function_Annotation ; rdfs:comment 'Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.' . ?annotation4 up:activity ?activity5 ; rdf:type up:Catalytic_Activity_Annotation . ?activity5 up:catalyticActivity <http://rdf.rhea-db.org/24576>; up:enzymeClass <http://purl.uniprot.org/enzyme/3.6.1.1>. ?annotation6 up:cofactor chebi:18420 ; rdf:type up:Cofactor_Annotation . ?annotation7 a up:Subunit_Annotation ; rdfs:comment 'Homohexamer.' . ?annotation8 a up:Subcellular_Location_Annotation . ?annotation8li9 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation10 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the PPase family.' . ?pfs11 up:annotation ?annotation12 . ?annotation12 faldo:begin ?pfsb13 ; faldo:end ?pfse14 ; up:ligand ?ligand15 ; rdf:type up:Binding_Site_Annotation . ?pfsb13 faldo:position ?thisPositionOn17 ; rdf:type faldo:ExactPosition . ?pfse14 faldo:position ?thisPositionOn18 ; rdf:type faldo:ExactPosition . ?ligand15 rdfs:subClassOf ?molecule16 . ?molecule16 rdfs:label 'substrate' . ?pfs19 up:annotation ?annotation20 . ?annotation20 faldo:begin ?pfsb21 ; faldo:end ?pfse22 ; up:ligand ?ligand23 ; rdf:type up:Binding_Site_Annotation . ?pfsb21 faldo:position ?thisPositionOn25 ; rdf:type faldo:ExactPosition . ?pfse22 faldo:position ?thisPositionOn26 ; rdf:type faldo:ExactPosition . ?ligand23 rdfs:subClassOf ?molecule24 . ?molecule24 rdfs:label 'substrate' . ?pfs27 up:annotation ?annotation28 . ?annotation28 faldo:begin ?pfsb29 ; faldo:end ?pfse30 ; up:ligand ?ligand31 ; rdf:type up:Binding_Site_Annotation . ?pfsb29 faldo:position ?thisPositionOn33 ; rdf:type faldo:ExactPosition . ?pfse30 faldo:position ?thisPositionOn34 ; rdf:type faldo:ExactPosition . ?ligand31 rdfs:subClassOf ?molecule32 . ?molecule32 rdfs:label 'substrate' . ?pfs35 up:annotation ?annotation36 . ?annotation36 faldo:begin ?pfsb37 ; faldo:end ?pfse38 ; up:ligand ?ligand39 ; rdf:type up:Binding_Site_Annotation . ?pfsb37 faldo:position ?thisPositionOn41 ; rdf:type faldo:ExactPosition . ?pfse38 faldo:position ?thisPositionOn42 ; rdf:type faldo:ExactPosition . ?ligand39 rdfs:subClassOf ?molecule40 . ?molecule40 rdfs:label 'substrate' . ?pfs43 up:annotation ?annotation44 . ?annotation44 faldo:begin ?pfsb45 ; faldo:end ?pfse46 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Proton acceptor' . ?pfsb45 faldo:position ?thisPositionOn47 ; rdf:type faldo:ExactPosition . ?pfse46 faldo:position ?thisPositionOn48 ; rdf:type faldo:ExactPosition . ?pfs49 up:annotation ?annotation50 . ?annotation50 faldo:begin ?pfsb51 ; faldo:end ?pfse52 ; up:ligand ?ligand53 ; rdf:type up:Binding_Site_Annotation . ?pfsb51 faldo:position ?thisPositionOn54 ; rdf:type faldo:ExactPosition . ?pfse52 faldo:position ?thisPositionOn55 ; rdf:type faldo:ExactPosition . ?ligand53 rdfs:subClassOf chebi:18420 . ?pfs56 up:annotation ?annotation57 . ?annotation57 faldo:begin ?pfsb58 ; faldo:end ?pfse59 ; up:ligand ?ligand60 ; rdf:type up:Binding_Site_Annotation . ?pfsb58 faldo:position ?thisPositionOn61 ; rdf:type faldo:ExactPosition . ?pfse59 faldo:position ?thisPositionOn62 ; rdf:type faldo:ExactPosition . ?ligand60 rdfs:subClassOf chebi:18420 . ?pfs63 up:annotation ?annotation64 . ?annotation64 faldo:begin ?pfsb65 ; faldo:end ?pfse66 ; up:ligand ?ligand67 ; rdf:type up:Binding_Site_Annotation . ?pfsb65 faldo:position ?thisPositionOn68 ; rdf:type faldo:ExactPosition . ?pfse66 faldo:position ?thisPositionOn69 ; rdf:type faldo:ExactPosition . ?ligand67 rdfs:subClassOf chebi:18420 . ?pfs70 up:annotation ?annotation71 . ?annotation71 faldo:begin ?pfsb72 ; faldo:end ?pfse73 ; up:ligand ?ligand74 ; rdf:type up:Binding_Site_Annotation . ?pfsb72 faldo:position ?thisPositionOn75 ; rdf:type faldo:ExactPosition . ?pfse73 faldo:position ?thisPositionOn76 ; rdf:type faldo:ExactPosition . ?ligand74 rdfs:subClassOf chebi:18420 . ?pfs77 up:annotation ?annotation78 . ?annotation78 faldo:begin ?pfsb79 ; faldo:end ?pfse80 ; up:ligand ?ligand81 ; rdf:type up:Binding_Site_Annotation . ?pfsb79 faldo:position ?thisPositionOn82 ; rdf:type faldo:ExactPosition . ?pfse80 faldo:position ?thisPositionOn83 ; rdf:type faldo:ExactPosition . ?ligand81 rdfs:subClassOf chebi:18420 . ?pfs84 up:annotation ?annotation85 . ?annotation85 faldo:begin ?pfsb86 ; faldo:end ?pfse87 ; up:ligand ?ligand88 ; rdf:type up:Binding_Site_Annotation . ?pfsb86 faldo:position ?thisPositionOn89 ; rdf:type faldo:ExactPosition . ?pfse87 faldo:position ?thisPositionOn90 ; rdf:type faldo:ExactPosition . ?ligand88 rdfs:subClassOf chebi:18420 . ?pfs91 up:annotation ?annotation92 . ?annotation92 faldo:begin ?pfsb93 ; faldo:end ?pfse94 ; up:ligand ?ligand95 ; rdf:type up:Binding_Site_Annotation . ?pfsb93 faldo:position ?thisPositionOn96 ; rdf:type faldo:ExactPosition . ?pfse94 faldo:position ?thisPositionOn97 ; rdf:type faldo:ExactPosition . ?ligand95 rdfs:subClassOf chebi:18420 . ?pfs98 up:annotation ?annotation99 . ?annotation99 faldo:begin ?pfsb100 ; faldo:end ?pfse101 ; up:ligand ?ligand102 ; rdf:type up:Binding_Site_Annotation . ?pfsb100 faldo:position ?thisPositionOn103 ; rdf:type faldo:ExactPosition . ?pfse101 faldo:position ?thisPositionOn104 ; rdf:type faldo:ExactPosition . ?ligand102 rdfs:subClassOf chebi:18420 . ?pfs105 up:annotation ?annotation106 . ?annotation106 faldo:begin ?pfsb107 ; faldo:end ?pfse108 ; up:ligand ?ligand109 ; rdf:type up:Binding_Site_Annotation . ?pfsb107 faldo:position ?thisPositionOn110 ; rdf:type faldo:ExactPosition . ?pfse108 faldo:position ?thisPositionOn111 ; rdf:type faldo:ExactPosition . ?ligand109 rdfs:subClassOf chebi:18420 . ?pfs112 up:annotation ?annotation113 . ?annotation113 faldo:begin ?pfsb114 ; faldo:end ?pfse115 ; up:ligand ?ligand116 ; rdf:type up:Binding_Site_Annotation . ?pfsb114 faldo:position ?thisPositionOn117 ; rdf:type faldo:ExactPosition . ?pfse115 faldo:position ?thisPositionOn118 ; rdf:type faldo:ExactPosition . ?ligand116 rdfs:subClassOf chebi:18420 . ?pfs119 up:annotation ?annotation120 . ?annotation120 faldo:begin ?pfsb121 ; faldo:end ?pfse122 ; up:ligand ?ligand123 ; rdf:type up:Binding_Site_Annotation . ?pfsb121 faldo:position ?thisPositionOn124 ; rdf:type faldo:ExactPosition . ?pfse122 faldo:position ?thisPositionOn125 ; rdf:type faldo:ExactPosition . ?ligand123 rdfs:subClassOf chebi:18420 . _:87509 a rdf:Statement ; up:attribution _:87477 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:87510 a rdf:Statement ; up:attribution _:87478 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name1 . _:87511 a rdf:Statement ; up:attribution _:87479 ; rdf:subject ?gene2 ; rdf:predicate up:encodedBy ; rdf:object ?gene2 . _:87512 a rdf:Statement ; up:attribution _:87480 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:87513 a rdf:Statement ; up:attribution _:87481 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:87514 a rdf:Statement ; up:attribution _:87482 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:87515 a rdf:Statement ; up:attribution _:87483 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:87516 a rdf:Statement ; up:attribution _:87484 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation8 . _:87517 a rdf:Statement ; up:attribution _:87485 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation10 . _:87518 a rdf:Statement ; up:attribution _:87486 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:963 . _:87519 a rdf:Statement ; up:attribution _:87487 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:378 . _:87520 a rdf:Statement ; up:attribution _:87488 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:460 . _:87521 a rdf:Statement ; up:attribution _:87489 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:87522 a rdf:Statement ; up:attribution _:87490 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0004427 . _:87523 a rdf:Statement ; up:attribution _:87491 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0000287 . _:87524 a rdf:Statement ; up:attribution _:87492 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005737 . _:87525 a rdf:Statement ; up:source unirule:MF_00209 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:87526 a rdf:Statement ; up:attribution _:87493 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:87527 a rdf:Statement ; up:source unirule:MF_00209 ; rdf:subject ?pfs19 ; rdf:predicate up:annotation ; rdf:object ?annotation20 . _:87528 a rdf:Statement ; up:attribution _:87494 ; rdf:subject ?pfs19 ; rdf:predicate up:annotation ; rdf:object ?annotation20 . _:87529 a rdf:Statement ; up:source unirule:MF_00209 ; rdf:subject ?pfs27 ; rdf:predicate up:annotation ; rdf:object ?annotation28 . _:87530 a rdf:Statement ; up:attribution _:87495 ; rdf:subject ?pfs27 ; rdf:predicate up:annotation ; rdf:object ?annotation28 . _:87531 a rdf:Statement ; up:source unirule:MF_00209 ; rdf:subject ?pfs35 ; rdf:predicate up:annotation ; rdf:object ?annotation36 . _:87532 a rdf:Statement ; up:attribution _:87496 ; rdf:subject ?pfs35 ; rdf:predicate up:annotation ; rdf:object ?annotation36 . _:87533 a rdf:Statement ; up:source unirule:MF_00209 ; rdf:subject ?pfs43 ; rdf:predicate up:annotation ; rdf:object ?annotation44 . _:87534 a rdf:Statement ; up:attribution _:87497 ; rdf:subject ?pfs43 ; rdf:predicate up:annotation ; rdf:object ?annotation44 . _:87535 a rdf:Statement ; up:source unirule:MF_00209 ; rdf:subject ?pfs49 ; rdf:predicate up:annotation ; rdf:object ?annotation50 . _:87536 a rdf:Statement ; up:attribution _:87498 ; rdf:subject ?pfs49 ; rdf:predicate up:annotation ; rdf:object ?annotation50 . _:87537 a rdf:Statement ; up:source unirule:MF_00209 ; rdf:subject ?pfs56 ; rdf:predicate up:annotation ; rdf:object ?annotation57 . _:87538 a rdf:Statement ; up:attribution _:87499 ; rdf:subject ?pfs56 ; rdf:predicate up:annotation ; rdf:object ?annotation57 . _:87539 a rdf:Statement ; up:source unirule:MF_00209 ; rdf:subject ?pfs63 ; rdf:predicate up:annotation ; rdf:object ?annotation64 . _:87540 a rdf:Statement ; up:attribution _:87500 ; rdf:subject ?pfs63 ; rdf:predicate up:annotation ; rdf:object ?annotation64 . _:87541 a rdf:Statement ; up:source unirule:MF_00209 ; rdf:subject ?pfs70 ; rdf:predicate up:annotation ; rdf:object ?annotation71 . _:87542 a rdf:Statement ; up:attribution _:87501 ; rdf:subject ?pfs70 ; rdf:predicate up:annotation ; rdf:object ?annotation71 . _:87543 a rdf:Statement ; up:source unirule:MF_00209 ; rdf:subject ?pfs77 ; rdf:predicate up:annotation ; rdf:object ?annotation78 . _:87544 a rdf:Statement ; up:attribution _:87502 ; rdf:subject ?pfs77 ; rdf:predicate up:annotation ; rdf:object ?annotation78 . _:87545 a rdf:Statement ; up:source unirule:MF_00209 ; rdf:subject ?pfs84 ; rdf:predicate up:annotation ; rdf:object ?annotation85 . _:87546 a rdf:Statement ; up:attribution _:87503 ; rdf:subject ?pfs84 ; rdf:predicate up:annotation ; rdf:object ?annotation85 . _:87547 a rdf:Statement ; up:source unirule:MF_00209 ; rdf:subject ?pfs91 ; rdf:predicate up:annotation ; rdf:object ?annotation92 . _:87548 a rdf:Statement ; up:attribution _:87504 ; rdf:subject ?pfs91 ; rdf:predicate up:annotation ; rdf:object ?annotation92 . _:87549 a rdf:Statement ; up:source unirule:MF_00209 ; rdf:subject ?pfs98 ; rdf:predicate up:annotation ; rdf:object ?annotation99 . _:87550 a rdf:Statement ; up:attribution _:87505 ; rdf:subject ?pfs98 ; rdf:predicate up:annotation ; rdf:object ?annotation99 . _:87551 a rdf:Statement ; up:source unirule:MF_00209 ; rdf:subject ?pfs105 ; rdf:predicate up:annotation ; rdf:object ?annotation106 . _:87552 a rdf:Statement ; up:attribution _:87506 ; rdf:subject ?pfs105 ; rdf:predicate up:annotation ; rdf:object ?annotation106 . _:87553 a rdf:Statement ; up:source unirule:MF_00209 ; rdf:subject ?pfs112 ; rdf:predicate up:annotation ; rdf:object ?annotation113 . _:87554 a rdf:Statement ; up:attribution _:87507 ; rdf:subject ?pfs112 ; rdf:predicate up:annotation ; rdf:object ?annotation113 . _:87555 a rdf:Statement ; up:source unirule:MF_00209 ; rdf:subject ?pfs119 ; rdf:predicate up:annotation ; rdf:object ?annotation120 . _:87556 a rdf:Statement ; up:attribution _:87508 ; rdf:subject ?pfs119 ; rdf:predicate up:annotation ; rdf:object ?annotation120 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00209 #Rule MF_00209 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2024-09-02 VALUES ?supertaxon126 {taxon:2 taxon:2157} ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00209 . ?thisOrganism rdfs:subClassOf+ ?supertaxon126 . BIND(URI(CONCAT(STR(?this), '#MF_00209a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_00209a1')) AS ?name1) . BIND(URI(CONCAT(STR(?this), '#MF_00209a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_00209a4')) AS ?annotation4) . BIND(URI(CONCAT(STR(?this), '#MF_00209a6')) AS ?annotation6) . BIND(URI(CONCAT(STR(?this), '#MF_00209a7')) AS ?annotation7) . BIND(URI(CONCAT(STR(?this), '#MF_00209a8')) AS ?annotation8) . BIND(URI(CONCAT(STR(?this), '#MF_00209a10')) AS ?annotation10) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch131 faldo:location ?templateMotifSequenceMatchRegionP9WI55132 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WI55134 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WI55MF_00209127 . ?templateMotifSequenceMatchRegionP9WI55132 faldo:begin ?templateMotifSequenceMatchBeginP9WI55133 . ?templateMotifSequenceMatchBeginP9WI55133 faldo:position ?templateMotifSequenceMatchBeginPositionP9WI55128 ; faldo:reference isoform:P9WI55-1 . ?templateMotifSequenceProfileAlignmentOperationP9WI55134 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . ?targetMotifMatch135 faldo:location ?targetMotifMatchRegionMatch136 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00209138 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WI55MF_00209129 . ?targetMotifMatchRegionMatch136 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00209137 . ?targetMotifMatchRegionMatchBeginMF_00209137 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00209130 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00209138 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WI55MF_00209127, 1, (STRLEN(?templateMotifCigarP9WI55MF_00209127) - STRLEN(REPLACE(?templateMotifCigarP9WI55MF_00209127, CONCAT('^(?:-*[^-]){', STR(((16 - ?templateMotifSequenceMatchBeginPositionP9WI55128) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1139) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WI55MF_00209129, 1, (STRLEN(?targetMotifMatchCigarP9WI55MF_00209129) - STRLEN(REPLACE(?targetMotifMatchCigarP9WI55MF_00209129, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1139), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WI55MF_00209129, 1, (STRLEN(?targetMotifMatchCigarP9WI55MF_00209129) - STRLEN(REPLACE(?targetMotifMatchCigarP9WI55MF_00209129, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1139), '}'), '')))), '[^-]', ''))) AS ?step2140) . BIND(((?step2140 + ?targetMotifMatchRegionMatchBeginPositionMF_00209130) - 1) AS ?thisPositionOn17) . BIND(?thisPositionOn17 AS ?thisPositionOn18) . BIND(?this AS ?pfs1t141) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfsb13) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfse14) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn17, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_00209a12')) AS ?annotation12) . BIND(?this AS ?pfs11) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch146 faldo:location ?templateMotifSequenceMatchRegionP9WI55147 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WI55149 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WI55MF_00209142 . ?templateMotifSequenceMatchRegionP9WI55147 faldo:begin ?templateMotifSequenceMatchBeginP9WI55148 . ?templateMotifSequenceMatchBeginP9WI55148 faldo:position ?templateMotifSequenceMatchBeginPositionP9WI55143 ; faldo:reference isoform:P9WI55-1 . ?templateMotifSequenceProfileAlignmentOperationP9WI55149 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . ?targetMotifMatch150 faldo:location ?targetMotifMatchRegionMatch151 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00209153 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WI55MF_00209144 . ?targetMotifMatchRegionMatch151 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00209152 . ?targetMotifMatchRegionMatchBeginMF_00209152 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00209145 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00209153 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WI55MF_00209142, 1, (STRLEN(?templateMotifCigarP9WI55MF_00209142) - STRLEN(REPLACE(?templateMotifCigarP9WI55MF_00209142, CONCAT('^(?:-*[^-]){', STR(((30 - ?templateMotifSequenceMatchBeginPositionP9WI55143) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1154) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WI55MF_00209144, 1, (STRLEN(?targetMotifMatchCigarP9WI55MF_00209144) - STRLEN(REPLACE(?targetMotifMatchCigarP9WI55MF_00209144, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1154), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WI55MF_00209144, 1, (STRLEN(?targetMotifMatchCigarP9WI55MF_00209144) - STRLEN(REPLACE(?targetMotifMatchCigarP9WI55MF_00209144, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1154), '}'), '')))), '[^-]', ''))) AS ?step2155) . BIND(((?step2155 + ?targetMotifMatchRegionMatchBeginPositionMF_00209145) - 1) AS ?thisPositionOn25) . BIND(?thisPositionOn25 AS ?thisPositionOn26) . BIND(?this AS ?pfs1t156) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfsb21) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn26))) AS ?pfse22) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn25, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_00209a20')) AS ?annotation20) . BIND(?this AS ?pfs19) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch161 faldo:location ?templateMotifSequenceMatchRegionP9WI55162 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WI55164 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WI55MF_00209157 . ?templateMotifSequenceMatchRegionP9WI55162 faldo:begin ?templateMotifSequenceMatchBeginP9WI55163 . ?templateMotifSequenceMatchBeginP9WI55163 faldo:position ?templateMotifSequenceMatchBeginPositionP9WI55158 ; faldo:reference isoform:P9WI55-1 . ?templateMotifSequenceProfileAlignmentOperationP9WI55164 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . ?targetMotifMatch165 faldo:location ?targetMotifMatchRegionMatch166 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00209168 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WI55MF_00209159 . ?targetMotifMatchRegionMatch166 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00209167 . ?targetMotifMatchRegionMatchBeginMF_00209167 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00209160 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00209168 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WI55MF_00209157, 1, (STRLEN(?templateMotifCigarP9WI55MF_00209157) - STRLEN(REPLACE(?templateMotifCigarP9WI55MF_00209157, CONCAT('^(?:-*[^-]){', STR(((42 - ?templateMotifSequenceMatchBeginPositionP9WI55158) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1169) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WI55MF_00209159, 1, (STRLEN(?targetMotifMatchCigarP9WI55MF_00209159) - STRLEN(REPLACE(?targetMotifMatchCigarP9WI55MF_00209159, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1169), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WI55MF_00209159, 1, (STRLEN(?targetMotifMatchCigarP9WI55MF_00209159) - STRLEN(REPLACE(?targetMotifMatchCigarP9WI55MF_00209159, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1169), '}'), '')))), '[^-]', ''))) AS ?step2170) . BIND(((?step2170 + ?targetMotifMatchRegionMatchBeginPositionMF_00209160) - 1) AS ?thisPositionOn33) . BIND(?thisPositionOn33 AS ?thisPositionOn34) . BIND(?this AS ?pfs1t171) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfsb29) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn34))) AS ?pfse30) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn33, 1) = 'Y')) . BIND(URI(CONCAT(STR(?this), '#MF_00209a28')) AS ?annotation28) . BIND(?this AS ?pfs27) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch176 faldo:location ?templateMotifSequenceMatchRegionP9WI55177 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WI55179 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WI55MF_00209172 . ?templateMotifSequenceMatchRegionP9WI55177 faldo:begin ?templateMotifSequenceMatchBeginP9WI55178 . ?templateMotifSequenceMatchBeginP9WI55178 faldo:position ?templateMotifSequenceMatchBeginPositionP9WI55173 ; faldo:reference isoform:P9WI55-1 . ?templateMotifSequenceProfileAlignmentOperationP9WI55179 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . ?targetMotifMatch180 faldo:location ?targetMotifMatchRegionMatch181 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00209183 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WI55MF_00209174 . ?targetMotifMatchRegionMatch181 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00209182 . ?targetMotifMatchRegionMatchBeginMF_00209182 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00209175 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00209183 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WI55MF_00209172, 1, (STRLEN(?templateMotifCigarP9WI55MF_00209172) - STRLEN(REPLACE(?templateMotifCigarP9WI55MF_00209172, CONCAT('^(?:-*[^-]){', STR(((126 - ?templateMotifSequenceMatchBeginPositionP9WI55173) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1184) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WI55MF_00209174, 1, (STRLEN(?targetMotifMatchCigarP9WI55MF_00209174) - STRLEN(REPLACE(?targetMotifMatchCigarP9WI55MF_00209174, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1184), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WI55MF_00209174, 1, (STRLEN(?targetMotifMatchCigarP9WI55MF_00209174) - STRLEN(REPLACE(?targetMotifMatchCigarP9WI55MF_00209174, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1184), '}'), '')))), '[^-]', ''))) AS ?step2185) . BIND(((?step2185 + ?targetMotifMatchRegionMatchBeginPositionMF_00209175) - 1) AS ?thisPositionOn41) . BIND(?thisPositionOn41 AS ?thisPositionOn42) . BIND(?this AS ?pfs1t186) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn41))) AS ?pfsb37) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn42))) AS ?pfse38) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn41, 1) = 'Y')) . BIND(URI(CONCAT(STR(?this), '#MF_00209a36')) AS ?annotation36) . BIND(?this AS ?pfs35) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch191 faldo:location ?templateMotifSequenceMatchRegionP9WI55192 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WI55194 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WI55MF_00209187 . ?templateMotifSequenceMatchRegionP9WI55192 faldo:begin ?templateMotifSequenceMatchBeginP9WI55193 . ?templateMotifSequenceMatchBeginP9WI55193 faldo:position ?templateMotifSequenceMatchBeginPositionP9WI55188 ; faldo:reference isoform:P9WI55-1 . ?templateMotifSequenceProfileAlignmentOperationP9WI55194 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . ?targetMotifMatch195 faldo:location ?targetMotifMatchRegionMatch196 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00209198 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WI55MF_00209189 . ?targetMotifMatchRegionMatch196 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00209197 . ?targetMotifMatchRegionMatchBeginMF_00209197 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00209190 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00209198 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:201174 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WI55MF_00209187, 1, (STRLEN(?templateMotifCigarP9WI55MF_00209187) - STRLEN(REPLACE(?templateMotifCigarP9WI55MF_00209187, CONCAT('^(?:-*[^-]){', STR(((89 - ?templateMotifSequenceMatchBeginPositionP9WI55188) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1199) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WI55MF_00209189, 1, (STRLEN(?targetMotifMatchCigarP9WI55MF_00209189) - STRLEN(REPLACE(?targetMotifMatchCigarP9WI55MF_00209189, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1199), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WI55MF_00209189, 1, (STRLEN(?targetMotifMatchCigarP9WI55MF_00209189) - STRLEN(REPLACE(?targetMotifMatchCigarP9WI55MF_00209189, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1199), '}'), '')))), '[^-]', ''))) AS ?step2200) . BIND(((?step2200 + ?targetMotifMatchRegionMatchBeginPositionMF_00209190) - 1) AS ?thisPositionOn47) . BIND(?thisPositionOn47 AS ?thisPositionOn48) . BIND(?this AS ?pfs2t201) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn47))) AS ?pfsb45) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn48))) AS ?pfse46) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn47, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_00209a44')) AS ?annotation44) . BIND(?this AS ?pfs43) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch206 faldo:location ?templateMotifSequenceMatchRegionP9WI55207 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WI55209 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WI55MF_00209202 . ?templateMotifSequenceMatchRegionP9WI55207 faldo:begin ?templateMotifSequenceMatchBeginP9WI55208 . ?templateMotifSequenceMatchBeginP9WI55208 faldo:position ?templateMotifSequenceMatchBeginPositionP9WI55203 ; faldo:reference isoform:P9WI55-1 . ?templateMotifSequenceProfileAlignmentOperationP9WI55209 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . ?targetMotifMatch210 faldo:location ?targetMotifMatchRegionMatch211 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00209213 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WI55MF_00209204 . ?targetMotifMatchRegionMatch211 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00209212 . ?targetMotifMatchRegionMatchBeginMF_00209212 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00209205 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00209213 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:201174 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WI55MF_00209202, 1, (STRLEN(?templateMotifCigarP9WI55MF_00209202) - STRLEN(REPLACE(?templateMotifCigarP9WI55MF_00209202, CONCAT('^(?:-*[^-]){', STR(((8 - ?templateMotifSequenceMatchBeginPositionP9WI55203) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1214) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WI55MF_00209204, 1, (STRLEN(?targetMotifMatchCigarP9WI55MF_00209204) - STRLEN(REPLACE(?targetMotifMatchCigarP9WI55MF_00209204, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1214), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WI55MF_00209204, 1, (STRLEN(?targetMotifMatchCigarP9WI55MF_00209204) - STRLEN(REPLACE(?targetMotifMatchCigarP9WI55MF_00209204, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1214), '}'), '')))), '[^-]', ''))) AS ?step2215) . BIND(((?step2215 + ?targetMotifMatchRegionMatchBeginPositionMF_00209205) - 1) AS ?thisPositionOn54) . BIND(?thisPositionOn54 AS ?thisPositionOn55) . BIND(?this AS ?pfs2t216) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn54))) AS ?pfsb51) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn55))) AS ?pfse52) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn54, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_00209a50')) AS ?annotation50) . BIND(?this AS ?pfs49) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch221 faldo:location ?templateMotifSequenceMatchRegionP9WI55222 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WI55224 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WI55MF_00209217 . ?templateMotifSequenceMatchRegionP9WI55222 faldo:begin ?templateMotifSequenceMatchBeginP9WI55223 . ?templateMotifSequenceMatchBeginP9WI55223 faldo:position ?templateMotifSequenceMatchBeginPositionP9WI55218 ; faldo:reference isoform:P9WI55-1 . ?templateMotifSequenceProfileAlignmentOperationP9WI55224 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . ?targetMotifMatch225 faldo:location ?targetMotifMatchRegionMatch226 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00209228 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WI55MF_00209219 . ?targetMotifMatchRegionMatch226 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00209227 . ?targetMotifMatchRegionMatchBeginMF_00209227 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00209220 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00209228 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:201174 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WI55MF_00209217, 1, (STRLEN(?templateMotifCigarP9WI55MF_00209217) - STRLEN(REPLACE(?templateMotifCigarP9WI55MF_00209217, CONCAT('^(?:-*[^-]){', STR(((52 - ?templateMotifSequenceMatchBeginPositionP9WI55218) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1229) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WI55MF_00209219, 1, (STRLEN(?targetMotifMatchCigarP9WI55MF_00209219) - STRLEN(REPLACE(?targetMotifMatchCigarP9WI55MF_00209219, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1229), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WI55MF_00209219, 1, (STRLEN(?targetMotifMatchCigarP9WI55MF_00209219) - STRLEN(REPLACE(?targetMotifMatchCigarP9WI55MF_00209219, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1229), '}'), '')))), '[^-]', ''))) AS ?step2230) . BIND(((?step2230 + ?targetMotifMatchRegionMatchBeginPositionMF_00209220) - 1) AS ?thisPositionOn61) . BIND(?thisPositionOn61 AS ?thisPositionOn62) . BIND(?this AS ?pfs2t231) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn61))) AS ?pfsb58) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn62))) AS ?pfse59) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn61, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_00209a57')) AS ?annotation57) . BIND(?this AS ?pfs56) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch236 faldo:location ?templateMotifSequenceMatchRegionP9WI55237 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WI55239 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WI55MF_00209232 . ?templateMotifSequenceMatchRegionP9WI55237 faldo:begin ?templateMotifSequenceMatchBeginP9WI55238 . ?templateMotifSequenceMatchBeginP9WI55238 faldo:position ?templateMotifSequenceMatchBeginPositionP9WI55233 ; faldo:reference isoform:P9WI55-1 . ?templateMotifSequenceProfileAlignmentOperationP9WI55239 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . ?targetMotifMatch240 faldo:location ?targetMotifMatchRegionMatch241 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00209243 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WI55MF_00209234 . ?targetMotifMatchRegionMatch241 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00209242 . ?targetMotifMatchRegionMatchBeginMF_00209242 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00209235 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00209243 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:201174 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WI55MF_00209232, 1, (STRLEN(?templateMotifCigarP9WI55MF_00209232) - STRLEN(REPLACE(?templateMotifCigarP9WI55MF_00209232, CONCAT('^(?:-*[^-]){', STR(((57 - ?templateMotifSequenceMatchBeginPositionP9WI55233) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1244) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WI55MF_00209234, 1, (STRLEN(?targetMotifMatchCigarP9WI55MF_00209234) - STRLEN(REPLACE(?targetMotifMatchCigarP9WI55MF_00209234, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1244), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WI55MF_00209234, 1, (STRLEN(?targetMotifMatchCigarP9WI55MF_00209234) - STRLEN(REPLACE(?targetMotifMatchCigarP9WI55MF_00209234, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1244), '}'), '')))), '[^-]', ''))) AS ?step2245) . BIND(((?step2245 + ?targetMotifMatchRegionMatchBeginPositionMF_00209235) - 1) AS ?thisPositionOn68) . BIND(?thisPositionOn68 AS ?thisPositionOn69) . BIND(?this AS ?pfs2t246) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn68))) AS ?pfsb65) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn69))) AS ?pfse66) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn68, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_00209a64')) AS ?annotation64) . BIND(?this AS ?pfs63) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch251 faldo:location ?templateMotifSequenceMatchRegionP9WI55252 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WI55254 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WI55MF_00209247 . ?templateMotifSequenceMatchRegionP9WI55252 faldo:begin ?templateMotifSequenceMatchBeginP9WI55253 . ?templateMotifSequenceMatchBeginP9WI55253 faldo:position ?templateMotifSequenceMatchBeginPositionP9WI55248 ; faldo:reference isoform:P9WI55-1 . ?templateMotifSequenceProfileAlignmentOperationP9WI55254 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . ?targetMotifMatch255 faldo:location ?targetMotifMatchRegionMatch256 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00209258 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WI55MF_00209249 . ?targetMotifMatchRegionMatch256 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00209257 . ?targetMotifMatchRegionMatchBeginMF_00209257 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00209250 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00209258 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:201174 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WI55MF_00209247, 1, (STRLEN(?templateMotifCigarP9WI55MF_00209247) - STRLEN(REPLACE(?templateMotifCigarP9WI55MF_00209247, CONCAT('^(?:-*[^-]){', STR(((57 - ?templateMotifSequenceMatchBeginPositionP9WI55248) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1259) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WI55MF_00209249, 1, (STRLEN(?targetMotifMatchCigarP9WI55MF_00209249) - STRLEN(REPLACE(?targetMotifMatchCigarP9WI55MF_00209249, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1259), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WI55MF_00209249, 1, (STRLEN(?targetMotifMatchCigarP9WI55MF_00209249) - STRLEN(REPLACE(?targetMotifMatchCigarP9WI55MF_00209249, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1259), '}'), '')))), '[^-]', ''))) AS ?step2260) . BIND(((?step2260 + ?targetMotifMatchRegionMatchBeginPositionMF_00209250) - 1) AS ?thisPositionOn75) . BIND(?thisPositionOn75 AS ?thisPositionOn76) . BIND(?this AS ?pfs2t261) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn75))) AS ?pfsb72) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn76))) AS ?pfse73) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn75, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_00209a71')) AS ?annotation71) . BIND(?this AS ?pfs70) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch266 faldo:location ?templateMotifSequenceMatchRegionP9WI55267 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WI55269 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WI55MF_00209262 . ?templateMotifSequenceMatchRegionP9WI55267 faldo:begin ?templateMotifSequenceMatchBeginP9WI55268 . ?templateMotifSequenceMatchBeginP9WI55268 faldo:position ?templateMotifSequenceMatchBeginPositionP9WI55263 ; faldo:reference isoform:P9WI55-1 . ?templateMotifSequenceProfileAlignmentOperationP9WI55269 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . ?targetMotifMatch270 faldo:location ?targetMotifMatchRegionMatch271 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00209273 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WI55MF_00209264 . ?targetMotifMatchRegionMatch271 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00209272 . ?targetMotifMatchRegionMatchBeginMF_00209272 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00209265 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00209273 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:201174 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WI55MF_00209262, 1, (STRLEN(?templateMotifCigarP9WI55MF_00209262) - STRLEN(REPLACE(?templateMotifCigarP9WI55MF_00209262, CONCAT('^(?:-*[^-]){', STR(((84 - ?templateMotifSequenceMatchBeginPositionP9WI55263) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1274) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WI55MF_00209264, 1, (STRLEN(?targetMotifMatchCigarP9WI55MF_00209264) - STRLEN(REPLACE(?targetMotifMatchCigarP9WI55MF_00209264, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1274), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WI55MF_00209264, 1, (STRLEN(?targetMotifMatchCigarP9WI55MF_00209264) - STRLEN(REPLACE(?targetMotifMatchCigarP9WI55MF_00209264, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1274), '}'), '')))), '[^-]', ''))) AS ?step2275) . BIND(((?step2275 + ?targetMotifMatchRegionMatchBeginPositionMF_00209265) - 1) AS ?thisPositionOn82) . BIND(?thisPositionOn82 AS ?thisPositionOn83) . BIND(?this AS ?pfs2t276) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn82))) AS ?pfsb79) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn83))) AS ?pfse80) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn82, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_00209a78')) AS ?annotation78) . BIND(?this AS ?pfs77) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch281 faldo:location ?templateMotifSequenceMatchRegionP9WI55282 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WI55284 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WI55MF_00209277 . ?templateMotifSequenceMatchRegionP9WI55282 faldo:begin ?templateMotifSequenceMatchBeginP9WI55283 . ?templateMotifSequenceMatchBeginP9WI55283 faldo:position ?templateMotifSequenceMatchBeginPositionP9WI55278 ; faldo:reference isoform:P9WI55-1 . ?templateMotifSequenceProfileAlignmentOperationP9WI55284 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . ?targetMotifMatch285 faldo:location ?targetMotifMatchRegionMatch286 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00209288 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WI55MF_00209279 . ?targetMotifMatchRegionMatch286 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00209287 . ?targetMotifMatchRegionMatchBeginMF_00209287 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00209280 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00209288 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:201174 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WI55MF_00209277, 1, (STRLEN(?templateMotifCigarP9WI55MF_00209277) - STRLEN(REPLACE(?templateMotifCigarP9WI55MF_00209277, CONCAT('^(?:-*[^-]){', STR(((89 - ?templateMotifSequenceMatchBeginPositionP9WI55278) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1289) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WI55MF_00209279, 1, (STRLEN(?targetMotifMatchCigarP9WI55MF_00209279) - STRLEN(REPLACE(?targetMotifMatchCigarP9WI55MF_00209279, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1289), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WI55MF_00209279, 1, (STRLEN(?targetMotifMatchCigarP9WI55MF_00209279) - STRLEN(REPLACE(?targetMotifMatchCigarP9WI55MF_00209279, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1289), '}'), '')))), '[^-]', ''))) AS ?step2290) . BIND(((?step2290 + ?targetMotifMatchRegionMatchBeginPositionMF_00209280) - 1) AS ?thisPositionOn89) . BIND(?thisPositionOn89 AS ?thisPositionOn90) . BIND(?this AS ?pfs2t291) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn89))) AS ?pfsb86) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn90))) AS ?pfse87) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn89, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_00209a85')) AS ?annotation85) . BIND(?this AS ?pfs84) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch296 faldo:location ?templateMotifSequenceMatchRegionP9WI55297 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9WI55299 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP9WI55MF_00209292 . ?templateMotifSequenceMatchRegionP9WI55297 faldo:begin ?templateMotifSequenceMatchBeginP9WI55298 . ?templateMotifSequenceMatchBeginP9WI55298 faldo:position ?templateMotifSequenceMatchBeginPositionP9WI55293 ; faldo:reference isoform:P9WI55-1 . ?templateMotifSequenceProfileAlignmentOperationP9WI55299 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . ?targetMotifMatch300 faldo:location ?targetMotifMatchRegionMatch301 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00209303 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP9WI55MF_00209294 . ?targetMotifMatchRegionMatch301 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00209302 . ?targetMotifMatchRegionMatchBeginMF_00209302 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00209295 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00209303 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:201174 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP9WI55MF_00209292, 1, (STRLEN(?templateMotifCigarP9WI55MF_00209292) - STRLEN(REPLACE(?templateMotifCigarP9WI55MF_00209292, CONCAT('^(?:-*[^-]){', STR(((89 - ?templateMotifSequenceMatchBeginPositionP9WI55293) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1304) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP9WI55MF_00209294, 1, (STRLEN(?targetMotifMatchCigarP9WI55MF_00209294) - STRLEN(REPLACE(?targetMotifMatchCigarP9WI55MF_00209294, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1304), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP9WI55MF_00209294, 1, (STRLEN(?targetMotifMatchCigarP9WI55MF_00209294) - STRLEN(REPLACE(?targetMotifMatchCigarP9WI55MF_00209294, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1304), '}'), '')))), '[^-]', ''))) AS ?step2305) . BIND(((?step2305 + ?targetMotifMatchRegionMatchBeginPositionMF_00209295) - 1) AS ?thisPositionOn96) . BIND(?thisPositionOn96 AS ?thisPositionOn97) . BIND(?this AS ?pfs2t306) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn96))) AS ?pfsb93) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn97))) AS ?pfse94) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn96, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_00209a92')) AS ?annotation92) . BIND(?this AS ?pfs91) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch311 faldo:location ?templateMotifSequenceMatchRegionP0A7A9312 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A7A9314 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A7A9MF_00209307 . ?templateMotifSequenceMatchRegionP0A7A9312 faldo:begin ?templateMotifSequenceMatchBeginP0A7A9313 . ?templateMotifSequenceMatchBeginP0A7A9313 faldo:position ?templateMotifSequenceMatchBeginPositionP0A7A9308 ; faldo:reference isoform:P0A7A9-1 . ?templateMotifSequenceProfileAlignmentOperationP0A7A9314 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . ?targetMotifMatch315 faldo:location ?targetMotifMatchRegionMatch316 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00209318 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A7A9MF_00209309 . ?targetMotifMatchRegionMatch316 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00209317 . ?targetMotifMatchRegionMatchBeginMF_00209317 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00209310 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00209318 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:201174 . })) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A7A9MF_00209307, 1, (STRLEN(?templateMotifCigarP0A7A9MF_00209307) - STRLEN(REPLACE(?templateMotifCigarP0A7A9MF_00209307, CONCAT('^(?:-*[^-]){', STR(((66 - ?templateMotifSequenceMatchBeginPositionP0A7A9308) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1319) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A7A9MF_00209309, 1, (STRLEN(?targetMotifMatchCigarP0A7A9MF_00209309) - STRLEN(REPLACE(?targetMotifMatchCigarP0A7A9MF_00209309, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1319), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A7A9MF_00209309, 1, (STRLEN(?targetMotifMatchCigarP0A7A9MF_00209309) - STRLEN(REPLACE(?targetMotifMatchCigarP0A7A9MF_00209309, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1319), '}'), '')))), '[^-]', ''))) AS ?step2320) . BIND(((?step2320 + ?targetMotifMatchRegionMatchBeginPositionMF_00209310) - 1) AS ?thisPositionOn103) . BIND(?thisPositionOn103 AS ?thisPositionOn104) . BIND(?this AS ?pfs3t321) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn103))) AS ?pfsb100) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn104))) AS ?pfse101) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn103, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_00209a99')) AS ?annotation99) . BIND(?this AS ?pfs98) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch326 faldo:location ?templateMotifSequenceMatchRegionP0A7A9327 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A7A9329 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A7A9MF_00209322 . ?templateMotifSequenceMatchRegionP0A7A9327 faldo:begin ?templateMotifSequenceMatchBeginP0A7A9328 . ?templateMotifSequenceMatchBeginP0A7A9328 faldo:position ?templateMotifSequenceMatchBeginPositionP0A7A9323 ; faldo:reference isoform:P0A7A9-1 . ?templateMotifSequenceProfileAlignmentOperationP0A7A9329 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . ?targetMotifMatch330 faldo:location ?targetMotifMatchRegionMatch331 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00209333 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A7A9MF_00209324 . ?targetMotifMatchRegionMatch331 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00209332 . ?targetMotifMatchRegionMatchBeginMF_00209332 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00209325 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00209333 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:201174 . })) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A7A9MF_00209322, 1, (STRLEN(?templateMotifCigarP0A7A9MF_00209322) - STRLEN(REPLACE(?templateMotifCigarP0A7A9MF_00209322, CONCAT('^(?:-*[^-]){', STR(((71 - ?templateMotifSequenceMatchBeginPositionP0A7A9323) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1334) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A7A9MF_00209324, 1, (STRLEN(?targetMotifMatchCigarP0A7A9MF_00209324) - STRLEN(REPLACE(?targetMotifMatchCigarP0A7A9MF_00209324, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1334), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A7A9MF_00209324, 1, (STRLEN(?targetMotifMatchCigarP0A7A9MF_00209324) - STRLEN(REPLACE(?targetMotifMatchCigarP0A7A9MF_00209324, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1334), '}'), '')))), '[^-]', ''))) AS ?step2335) . BIND(((?step2335 + ?targetMotifMatchRegionMatchBeginPositionMF_00209325) - 1) AS ?thisPositionOn110) . BIND(?thisPositionOn110 AS ?thisPositionOn111) . BIND(?this AS ?pfs3t336) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn110))) AS ?pfsb107) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn111))) AS ?pfse108) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn110, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_00209a106')) AS ?annotation106) . BIND(?this AS ?pfs105) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch341 faldo:location ?templateMotifSequenceMatchRegionP0A7A9342 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A7A9344 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A7A9MF_00209337 . ?templateMotifSequenceMatchRegionP0A7A9342 faldo:begin ?templateMotifSequenceMatchBeginP0A7A9343 . ?templateMotifSequenceMatchBeginP0A7A9343 faldo:position ?templateMotifSequenceMatchBeginPositionP0A7A9338 ; faldo:reference isoform:P0A7A9-1 . ?templateMotifSequenceProfileAlignmentOperationP0A7A9344 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . ?targetMotifMatch345 faldo:location ?targetMotifMatchRegionMatch346 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00209348 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A7A9MF_00209339 . ?targetMotifMatchRegionMatch346 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00209347 . ?targetMotifMatchRegionMatchBeginMF_00209347 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00209340 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00209348 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:201174 . })) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A7A9MF_00209337, 1, (STRLEN(?templateMotifCigarP0A7A9MF_00209337) - STRLEN(REPLACE(?templateMotifCigarP0A7A9MF_00209337, CONCAT('^(?:-*[^-]){', STR(((71 - ?templateMotifSequenceMatchBeginPositionP0A7A9338) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1349) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A7A9MF_00209339, 1, (STRLEN(?targetMotifMatchCigarP0A7A9MF_00209339) - STRLEN(REPLACE(?targetMotifMatchCigarP0A7A9MF_00209339, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1349), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A7A9MF_00209339, 1, (STRLEN(?targetMotifMatchCigarP0A7A9MF_00209339) - STRLEN(REPLACE(?targetMotifMatchCigarP0A7A9MF_00209339, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1349), '}'), '')))), '[^-]', ''))) AS ?step2350) . BIND(((?step2350 + ?targetMotifMatchRegionMatchBeginPositionMF_00209340) - 1) AS ?thisPositionOn117) . BIND(?thisPositionOn117 AS ?thisPositionOn118) . BIND(?this AS ?pfs3t351) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn117))) AS ?pfsb114) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn118))) AS ?pfse115) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn117, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_00209a113')) AS ?annotation113) . BIND(?this AS ?pfs112) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch356 faldo:location ?templateMotifSequenceMatchRegionP0A7A9357 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A7A9359 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A7A9MF_00209352 . ?templateMotifSequenceMatchRegionP0A7A9357 faldo:begin ?templateMotifSequenceMatchBeginP0A7A9358 . ?templateMotifSequenceMatchBeginP0A7A9358 faldo:position ?templateMotifSequenceMatchBeginPositionP0A7A9353 ; faldo:reference isoform:P0A7A9-1 . ?templateMotifSequenceProfileAlignmentOperationP0A7A9359 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . ?targetMotifMatch360 faldo:location ?targetMotifMatchRegionMatch361 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00209363 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A7A9MF_00209354 . ?targetMotifMatchRegionMatch361 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00209362 . ?targetMotifMatchRegionMatchBeginMF_00209362 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00209355 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00209363 edam:has_input signature:MF_00209 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:201174 . })) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A7A9MF_00209352, 1, (STRLEN(?templateMotifCigarP0A7A9MF_00209352) - STRLEN(REPLACE(?templateMotifCigarP0A7A9MF_00209352, CONCAT('^(?:-*[^-]){', STR(((103 - ?templateMotifSequenceMatchBeginPositionP0A7A9353) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1364) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A7A9MF_00209354, 1, (STRLEN(?targetMotifMatchCigarP0A7A9MF_00209354) - STRLEN(REPLACE(?targetMotifMatchCigarP0A7A9MF_00209354, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1364), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A7A9MF_00209354, 1, (STRLEN(?targetMotifMatchCigarP0A7A9MF_00209354) - STRLEN(REPLACE(?targetMotifMatchCigarP0A7A9MF_00209354, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1364), '}'), '')))), '[^-]', ''))) AS ?step2365) . BIND(((?step2365 + ?targetMotifMatchRegionMatchBeginPositionMF_00209355) - 1) AS ?thisPositionOn124) . BIND(?thisPositionOn124 AS ?thisPositionOn125) . BIND(?this AS ?pfs3t366) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn124))) AS ?pfsb121) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn125))) AS ?pfse122) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn124, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_00209a120')) AS ?annotation120) . BIND(?this AS ?pfs119) . } }