CONSTRUCT { _:86770 up:source unirule:MF_00210 . _:86771 up:source unirule:MF_00210 . _:86772 up:source unirule:MF_00210 . _:86773 up:source unirule:MF_00210 . _:86774 up:source unirule:MF_00210 . _:86775 up:source unirule:MF_00210 . _:86776 up:source unirule:MF_00210 . _:86777 up:source unirule:MF_00210 . _:86778 up:source unirule:MF_00210 . _:86779 up:source unirule:MF_00210 . _:86780 up:source unirule:MF_00210 . _:86781 up:source unirule:MF_00210 . _:86782 up:source unirule:MF_00210 . _:86783 up:source unirule:MF_00210 . _:86784 up:source unirule:MF_00210 . _:86785 up:source unirule:MF_00210 . _:86786 up:source unirule:MF_00210 . _:86787 up:source unirule:MF_00210 . _:86788 up:source unirule:MF_00210 . _:86789 up:source unirule:MF_00210 . _:86790 up:source unirule:MF_00210 . _:86791 up:source unirule:MF_00210 . _:86792 up:source unirule:MF_00210 . _:86793 up:source unirule:MF_00210 . _:86794 up:source unirule:MF_00210 . _:86795 up:source unirule:MF_00210 . _:86796 up:source unirule:MF_00210 . _:86797 up:source unirule:MF_00210 . _:86798 up:source unirule:MF_00210 . _:86799 up:source unirule:MF_00210 . _:86800 up:source unirule:MF_00210 . _:86801 up:source unirule:MF_00210 . _:86802 up:source unirule:MF_00210 . ?this up:alternativeName ?name1 ; up:annotation ?annotation3 , ?annotation4 , ?annotation6 , ?annotation7 , ?annotation9 ; up:classifiedWith GO:0003866 , GO:0005737 , GO:0009423 , keyword:28 , keyword:57 , keyword:808 , keyword:963 ; up:recommendedName ?name0 . ?name0 up:ecName '2.5.1.19' ; up:fullName '3-phosphoshikimate 1-carboxyvinyltransferase' ; rdf:type up:Structured_Name . ?name1 up:fullName '5-enolpyruvylshikimate-3-phosphate synthase' ; up:shortName 'EPSP synthase' , 'EPSPS' ; rdf:type up:Structured_Name . ?gene2 skos:prefLabel 'aroA' . ?annotation3 a up:Function_Annotation ; rdfs:comment 'Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.' . ?annotation4 up:activity ?activity5 ; rdf:type up:Catalytic_Activity_Annotation . ?activity5 up:catalyticActivity <http://rdf.rhea-db.org/21256>; up:enzymeClass <http://purl.uniprot.org/enzyme/2.5.1.19>. ?annotation6 a up:Subunit_Annotation ; rdfs:comment 'Monomer.' . ?annotation7 a up:Subcellular_Location_Annotation . ?annotation7li8 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation9 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the EPSP synthase family.' . ?pfs12 up:annotation ?annotation13 . ?annotation13 faldo:begin ?pfsb14 ; faldo:end ?pfse15 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Proton acceptor' . ?pfsb14 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?pfse15 faldo:position ?thisPositionOn17 ; rdf:type faldo:ExactPosition . ?pfs18 up:annotation ?annotation19 . ?annotation19 faldo:begin ?pfsb20 ; faldo:end ?pfse21 ; up:ligand ?ligand22 ; rdf:type up:Binding_Site_Annotation . ?pfsb20 faldo:position ?thisPositionOn23 ; rdf:type faldo:ExactPosition . ?pfse21 faldo:position ?thisPositionOn24 ; rdf:type faldo:ExactPosition . ?ligand22 rdfs:subClassOf chebi:145989 . ?pfs25 up:annotation ?annotation26 . ?annotation26 faldo:begin ?pfsb27 ; faldo:end ?pfse28 ; up:ligand ?ligand29 ; rdf:type up:Binding_Site_Annotation . ?pfsb27 faldo:position ?thisPositionOn30 ; rdf:type faldo:ExactPosition . ?pfse28 faldo:position ?thisPositionOn31 ; rdf:type faldo:ExactPosition . ?ligand29 rdfs:subClassOf chebi:58702 . ?pfs32 up:annotation ?annotation33 . ?annotation33 faldo:begin ?pfsb34 ; faldo:end ?pfse35 ; up:ligand ?ligand36 ; rdf:type up:Binding_Site_Annotation . ?pfsb34 faldo:position ?thisPositionOn37 ; rdf:type faldo:ExactPosition . ?pfse35 faldo:position ?thisPositionOn38 ; rdf:type faldo:ExactPosition . ?ligand36 rdfs:subClassOf chebi:145989 . ?pfs39 up:annotation ?annotation40 . ?annotation40 faldo:begin ?pfsb41 ; faldo:end ?pfse42 ; up:ligand ?ligand43 ; rdf:type up:Binding_Site_Annotation . ?pfsb41 faldo:position ?thisPositionOn44 ; rdf:type faldo:ExactPosition . ?pfse42 faldo:position ?thisPositionOn45 ; rdf:type faldo:ExactPosition . ?ligand43 rdfs:subClassOf chebi:145989 . ?pfs46 up:annotation ?annotation47 . ?annotation47 faldo:begin ?pfsb48 ; faldo:end ?pfse49 ; up:ligand ?ligand50 ; rdf:type up:Binding_Site_Annotation . ?pfsb48 faldo:position ?thisPositionOn51 ; rdf:type faldo:ExactPosition . ?pfse49 faldo:position ?thisPositionOn52 ; rdf:type faldo:ExactPosition . ?ligand50 rdfs:subClassOf chebi:58702 . ?pfs53 up:annotation ?annotation54 . ?annotation54 faldo:begin ?pfsb55 ; faldo:end ?pfse56 ; up:ligand ?ligand57 ; rdf:type up:Binding_Site_Annotation . ?pfsb55 faldo:position ?thisPositionOn58 ; rdf:type faldo:ExactPosition . ?pfse56 faldo:position ?thisPositionOn59 ; rdf:type faldo:ExactPosition . ?ligand57 rdfs:subClassOf chebi:58702 . ?pfs60 up:annotation ?annotation61 . ?annotation61 faldo:begin ?pfsb62 ; faldo:end ?pfse63 ; up:ligand ?ligand64 ; rdf:type up:Binding_Site_Annotation . ?pfsb62 faldo:position ?thisPositionOn65 ; rdf:type faldo:ExactPosition . ?pfse63 faldo:position ?thisPositionOn66 ; rdf:type faldo:ExactPosition . ?ligand64 rdfs:subClassOf chebi:145989 . ?pfs67 up:annotation ?annotation68 . ?annotation68 faldo:begin ?pfsb69 ; faldo:end ?pfse70 ; up:ligand ?ligand71 ; rdf:type up:Binding_Site_Annotation . ?pfsb69 faldo:position ?thisPositionOn72 ; rdf:type faldo:ExactPosition . ?pfse70 faldo:position ?thisPositionOn73 ; rdf:type faldo:ExactPosition . ?ligand71 rdfs:subClassOf chebi:145989 . ?pfs74 up:annotation ?annotation75 . ?annotation75 faldo:begin ?pfsb76 ; faldo:end ?pfse77 ; up:ligand ?ligand78 ; rdf:type up:Binding_Site_Annotation . ?pfsb76 faldo:position ?thisPositionOn79 ; rdf:type faldo:ExactPosition . ?pfse77 faldo:position ?thisPositionOn80 ; rdf:type faldo:ExactPosition . ?ligand78 rdfs:subClassOf chebi:145989 . ?pfs81 up:annotation ?annotation82 . ?annotation82 faldo:begin ?pfsb83 ; faldo:end ?pfse84 ; up:ligand ?ligand85 ; rdf:type up:Binding_Site_Annotation . ?pfsb83 faldo:position ?thisPositionOn86 ; rdf:type faldo:ExactPosition . ?pfse84 faldo:position ?thisPositionOn87 ; rdf:type faldo:ExactPosition . ?ligand85 rdfs:subClassOf chebi:58702 . ?pfs88 up:annotation ?annotation89 . ?annotation89 faldo:begin ?pfsb90 ; faldo:end ?pfse91 ; up:ligand ?ligand92 ; rdf:type up:Binding_Site_Annotation . ?pfsb90 faldo:position ?thisPositionOn93 ; rdf:type faldo:ExactPosition . ?pfse91 faldo:position ?thisPositionOn94 ; rdf:type faldo:ExactPosition . ?ligand92 rdfs:subClassOf chebi:145989 . ?pfs95 up:annotation ?annotation96 . ?annotation96 faldo:begin ?pfsb97 ; faldo:end ?pfse98 ; up:ligand ?ligand99 ; rdf:type up:Binding_Site_Annotation . ?pfsb97 faldo:position ?thisPositionOn100 ; rdf:type faldo:ExactPosition . ?pfse98 faldo:position ?thisPositionOn101 ; rdf:type faldo:ExactPosition . ?ligand99 rdfs:subClassOf chebi:145989 . ?pfs102 up:annotation ?annotation103 . ?annotation103 faldo:begin ?pfsb104 ; faldo:end ?pfse105 ; up:ligand ?ligand106 ; rdf:type up:Binding_Site_Annotation . ?pfsb104 faldo:position ?thisPositionOn107 ; rdf:type faldo:ExactPosition . ?pfse105 faldo:position ?thisPositionOn108 ; rdf:type faldo:ExactPosition . ?ligand106 rdfs:subClassOf chebi:145989 . ?pfs109 up:annotation ?annotation110 . ?annotation110 faldo:begin ?pfsb111 ; faldo:end ?pfse112 ; up:ligand ?ligand113 ; rdf:type up:Binding_Site_Annotation . ?pfsb111 faldo:position ?thisPositionOn114 ; rdf:type faldo:ExactPosition . ?pfse112 faldo:position ?thisPositionOn115 ; rdf:type faldo:ExactPosition . ?ligand113 rdfs:subClassOf chebi:145989 . ?pfs116 up:annotation ?annotation117 . ?annotation117 faldo:begin ?pfsb118 ; faldo:end ?pfse119 ; up:ligand ?ligand120 ; rdf:type up:Binding_Site_Annotation . ?pfsb118 faldo:position ?thisPositionOn121 ; rdf:type faldo:ExactPosition . ?pfse119 faldo:position ?thisPositionOn122 ; rdf:type faldo:ExactPosition . ?ligand120 rdfs:subClassOf chebi:58702 . ?pfs123 up:annotation ?annotation124 . ?annotation124 faldo:begin ?pfsb125 ; faldo:end ?pfse126 ; up:ligand ?ligand127 ; rdf:type up:Binding_Site_Annotation . ?pfsb125 faldo:position ?thisPositionOn128 ; rdf:type faldo:ExactPosition . ?pfse126 faldo:position ?thisPositionOn129 ; rdf:type faldo:ExactPosition . ?ligand127 rdfs:subClassOf chebi:58702 . ?pfs130 up:annotation ?annotation131 . ?annotation131 faldo:begin ?pfsb132 ; faldo:end ?pfse133 ; up:ligand ?ligand134 ; rdf:type up:Binding_Site_Annotation . ?pfsb132 faldo:position ?thisPositionOn135 ; rdf:type faldo:ExactPosition . ?pfse133 faldo:position ?thisPositionOn136 ; rdf:type faldo:ExactPosition . ?ligand134 rdfs:subClassOf chebi:58702 . _:86803 a rdf:Statement ; up:attribution _:86770 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:86804 a rdf:Statement ; up:attribution _:86771 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name1 . _:86805 a rdf:Statement ; up:attribution _:86772 ; rdf:subject ?gene2 ; rdf:predicate up:encodedBy ; rdf:object ?gene2 . _:86806 a rdf:Statement ; up:attribution _:86773 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:86807 a rdf:Statement ; up:attribution _:86774 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:86808 a rdf:Statement ; up:attribution _:86775 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:86809 a rdf:Statement ; up:attribution _:86776 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:86810 a rdf:Statement ; up:attribution _:86777 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation9 . _:86811 a rdf:Statement ; up:attribution _:86778 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:28 . _:86812 a rdf:Statement ; up:attribution _:86779 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:57 . _:86813 a rdf:Statement ; up:attribution _:86780 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:963 . _:86814 a rdf:Statement ; up:attribution _:86781 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:808 . _:86815 a rdf:Statement ; up:attribution _:86782 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0003866 . _:86816 a rdf:Statement ; up:attribution _:86783 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0009423 . _:86817 a rdf:Statement ; up:attribution _:86784 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005737 . _:86818 a rdf:Statement ; up:source unirule:MF_00210 ; rdf:subject ?pfs12 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:86819 a rdf:Statement ; up:attribution _:86785 ; rdf:subject ?pfs12 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:86820 a rdf:Statement ; up:source unirule:MF_00210 ; rdf:subject ?pfs18 ; rdf:predicate up:annotation ; rdf:object ?annotation19 . _:86821 a rdf:Statement ; up:attribution _:86786 ; rdf:subject ?pfs18 ; rdf:predicate up:annotation ; rdf:object ?annotation19 . _:86822 a rdf:Statement ; up:source unirule:MF_00210 ; rdf:subject ?pfs25 ; rdf:predicate up:annotation ; rdf:object ?annotation26 . _:86823 a rdf:Statement ; up:attribution _:86787 ; rdf:subject ?pfs25 ; rdf:predicate up:annotation ; rdf:object ?annotation26 . _:86824 a rdf:Statement ; up:source unirule:MF_00210 ; rdf:subject ?pfs32 ; rdf:predicate up:annotation ; rdf:object ?annotation33 . _:86825 a rdf:Statement ; up:attribution _:86788 ; rdf:subject ?pfs32 ; rdf:predicate up:annotation ; rdf:object ?annotation33 . _:86826 a rdf:Statement ; up:source unirule:MF_00210 ; rdf:subject ?pfs39 ; rdf:predicate up:annotation ; rdf:object ?annotation40 . _:86827 a rdf:Statement ; up:attribution _:86789 ; rdf:subject ?pfs39 ; rdf:predicate up:annotation ; rdf:object ?annotation40 . _:86828 a rdf:Statement ; up:source unirule:MF_00210 ; rdf:subject ?pfs46 ; rdf:predicate up:annotation ; rdf:object ?annotation47 . _:86829 a rdf:Statement ; up:attribution _:86790 ; rdf:subject ?pfs46 ; rdf:predicate up:annotation ; rdf:object ?annotation47 . _:86830 a rdf:Statement ; up:source unirule:MF_00210 ; rdf:subject ?pfs53 ; rdf:predicate up:annotation ; rdf:object ?annotation54 . _:86831 a rdf:Statement ; up:attribution _:86791 ; rdf:subject ?pfs53 ; rdf:predicate up:annotation ; rdf:object ?annotation54 . _:86832 a rdf:Statement ; up:source unirule:MF_00210 ; rdf:subject ?pfs60 ; rdf:predicate up:annotation ; rdf:object ?annotation61 . _:86833 a rdf:Statement ; up:attribution _:86792 ; rdf:subject ?pfs60 ; rdf:predicate up:annotation ; rdf:object ?annotation61 . _:86834 a rdf:Statement ; up:source unirule:MF_00210 ; rdf:subject ?pfs67 ; rdf:predicate up:annotation ; rdf:object ?annotation68 . _:86835 a rdf:Statement ; up:attribution _:86793 ; rdf:subject ?pfs67 ; rdf:predicate up:annotation ; rdf:object ?annotation68 . _:86836 a rdf:Statement ; up:source unirule:MF_00210 ; rdf:subject ?pfs74 ; rdf:predicate up:annotation ; rdf:object ?annotation75 . _:86837 a rdf:Statement ; up:attribution _:86794 ; rdf:subject ?pfs74 ; rdf:predicate up:annotation ; rdf:object ?annotation75 . _:86838 a rdf:Statement ; up:source unirule:MF_00210 ; rdf:subject ?pfs81 ; rdf:predicate up:annotation ; rdf:object ?annotation82 . _:86839 a rdf:Statement ; up:attribution _:86795 ; rdf:subject ?pfs81 ; rdf:predicate up:annotation ; rdf:object ?annotation82 . _:86840 a rdf:Statement ; up:source unirule:MF_00210 ; rdf:subject ?pfs88 ; rdf:predicate up:annotation ; rdf:object ?annotation89 . _:86841 a rdf:Statement ; up:attribution _:86796 ; rdf:subject ?pfs88 ; rdf:predicate up:annotation ; rdf:object ?annotation89 . _:86842 a rdf:Statement ; up:source unirule:MF_00210 ; rdf:subject ?pfs95 ; rdf:predicate up:annotation ; rdf:object ?annotation96 . _:86843 a rdf:Statement ; up:attribution _:86797 ; rdf:subject ?pfs95 ; rdf:predicate up:annotation ; rdf:object ?annotation96 . _:86844 a rdf:Statement ; up:source unirule:MF_00210 ; rdf:subject ?pfs102 ; rdf:predicate up:annotation ; rdf:object ?annotation103 . _:86845 a rdf:Statement ; up:attribution _:86798 ; rdf:subject ?pfs102 ; rdf:predicate up:annotation ; rdf:object ?annotation103 . _:86846 a rdf:Statement ; up:source unirule:MF_00210 ; rdf:subject ?pfs109 ; rdf:predicate up:annotation ; rdf:object ?annotation110 . _:86847 a rdf:Statement ; up:attribution _:86799 ; rdf:subject ?pfs109 ; rdf:predicate up:annotation ; rdf:object ?annotation110 . _:86848 a rdf:Statement ; up:source unirule:MF_00210 ; rdf:subject ?pfs116 ; rdf:predicate up:annotation ; rdf:object ?annotation117 . _:86849 a rdf:Statement ; up:attribution _:86800 ; rdf:subject ?pfs116 ; rdf:predicate up:annotation ; rdf:object ?annotation117 . _:86850 a rdf:Statement ; up:source unirule:MF_00210 ; rdf:subject ?pfs123 ; rdf:predicate up:annotation ; rdf:object ?annotation124 . _:86851 a rdf:Statement ; up:attribution _:86801 ; rdf:subject ?pfs123 ; rdf:predicate up:annotation ; rdf:object ?annotation124 . _:86852 a rdf:Statement ; up:source unirule:MF_00210 ; rdf:subject ?pfs130 ; rdf:predicate up:annotation ; rdf:object ?annotation131 . _:86853 a rdf:Statement ; up:attribution _:86802 ; rdf:subject ?pfs130 ; rdf:predicate up:annotation ; rdf:object ?annotation131 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00210 #Rule MF_00210 Created by:hamap on:2001-06-01 Modified by:crivoire on:2024-03-12 VALUES ?supertaxon137 {taxon:2 taxon:2157} ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00210 . ?thisOrganism rdfs:subClassOf+ ?supertaxon137 . FILTER (! (EXISTS { ?this rdfs:seeAlso signature:MF_03143 . })) . BIND(URI(CONCAT(STR(?this), '#MF_00210a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_00210a1')) AS ?name1) . BIND(URI(CONCAT(STR(?this), '#MF_00210a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_00210a4')) AS ?annotation4) . BIND(URI(CONCAT(STR(?this), '#MF_00210a6')) AS ?annotation6) . BIND(URI(CONCAT(STR(?this), '#MF_00210a7')) AS ?annotation7) . BIND(URI(CONCAT(STR(?this), '#MF_00210a9')) AS ?annotation9) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch142 faldo:location ?templateMotifSequenceMatchRegionP0A6D3143 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6D3145 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6D3MF_00210138 . ?templateMotifSequenceMatchRegionP0A6D3143 faldo:begin ?templateMotifSequenceMatchBeginP0A6D3144 . ?templateMotifSequenceMatchBeginP0A6D3144 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6D3139 ; faldo:reference isoform:P0A6D3-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6D3145 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . ?targetMotifMatch146 faldo:location ?targetMotifMatchRegionMatch147 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00210149 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6D3MF_00210140 . ?targetMotifMatchRegionMatch147 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00210148 . ?targetMotifMatchRegionMatchBeginMF_00210148 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00210141 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00210149 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6D3MF_00210138, 1, (STRLEN(?templateMotifCigarP0A6D3MF_00210138) - STRLEN(REPLACE(?templateMotifCigarP0A6D3MF_00210138, CONCAT('^(?:-*[^-]){', STR(((313 - ?templateMotifSequenceMatchBeginPositionP0A6D3139) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1150) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210140, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210140) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210140, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1150), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210140, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210140) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210140, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1150), '}'), '')))), '[^-]', ''))) AS ?step2151) . BIND(((?step2151 + ?targetMotifMatchRegionMatchBeginPositionMF_00210141) - 1) AS ?thisPositionOn16) . BIND(?thisPositionOn16 AS ?thisPositionOn17) . BIND(?this AS ?pfs1t152) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfsb14) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfse15) . FILTER (REGEX('[DE]', SUBSTR(?thisSequenceValue, ?thisPositionOn16, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_00210a13')) AS ?annotation13) . BIND(?this AS ?pfs12) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch157 faldo:location ?templateMotifSequenceMatchRegionP0A6D3158 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6D3160 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6D3MF_00210153 . ?templateMotifSequenceMatchRegionP0A6D3158 faldo:begin ?templateMotifSequenceMatchBeginP0A6D3159 . ?templateMotifSequenceMatchBeginP0A6D3159 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6D3154 ; faldo:reference isoform:P0A6D3-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6D3160 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . ?targetMotifMatch161 faldo:location ?targetMotifMatchRegionMatch162 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00210164 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6D3MF_00210155 . ?targetMotifMatchRegionMatch162 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00210163 . ?targetMotifMatchRegionMatchBeginMF_00210163 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00210156 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00210164 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6D3MF_00210153, 1, (STRLEN(?templateMotifCigarP0A6D3MF_00210153) - STRLEN(REPLACE(?templateMotifCigarP0A6D3MF_00210153, CONCAT('^(?:-*[^-]){', STR(((22 - ?templateMotifSequenceMatchBeginPositionP0A6D3154) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1165) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210155, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210155) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210155, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1165), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210155, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210155) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210155, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1165), '}'), '')))), '[^-]', ''))) AS ?step2166) . BIND(((?step2166 + ?targetMotifMatchRegionMatchBeginPositionMF_00210156) - 1) AS ?thisPositionOn23) . BIND(?thisPositionOn23 AS ?thisPositionOn24) . BIND(?this AS ?pfs1t167) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfsb20) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfse21) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn23, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_00210a19')) AS ?annotation19) . BIND(?this AS ?pfs18) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch172 faldo:location ?templateMotifSequenceMatchRegionP0A6D3173 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6D3175 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6D3MF_00210168 . ?templateMotifSequenceMatchRegionP0A6D3173 faldo:begin ?templateMotifSequenceMatchBeginP0A6D3174 . ?templateMotifSequenceMatchBeginP0A6D3174 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6D3169 ; faldo:reference isoform:P0A6D3-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6D3175 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . ?targetMotifMatch176 faldo:location ?targetMotifMatchRegionMatch177 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00210179 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6D3MF_00210170 . ?targetMotifMatchRegionMatch177 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00210178 . ?targetMotifMatchRegionMatchBeginMF_00210178 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00210171 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00210179 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6D3MF_00210168, 1, (STRLEN(?templateMotifCigarP0A6D3MF_00210168) - STRLEN(REPLACE(?templateMotifCigarP0A6D3MF_00210168, CONCAT('^(?:-*[^-]){', STR(((22 - ?templateMotifSequenceMatchBeginPositionP0A6D3169) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1180) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210170, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210170) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210170, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1180), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210170, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210170) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210170, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1180), '}'), '')))), '[^-]', ''))) AS ?step2181) . BIND(((?step2181 + ?targetMotifMatchRegionMatchBeginPositionMF_00210171) - 1) AS ?thisPositionOn30) . BIND(?thisPositionOn30 AS ?thisPositionOn31) . BIND(?this AS ?pfs1t182) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn30))) AS ?pfsb27) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn31))) AS ?pfse28) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn30, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_00210a26')) AS ?annotation26) . BIND(?this AS ?pfs25) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch187 faldo:location ?templateMotifSequenceMatchRegionP0A6D3188 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6D3190 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6D3MF_00210183 . ?templateMotifSequenceMatchRegionP0A6D3188 faldo:begin ?templateMotifSequenceMatchBeginP0A6D3189 . ?templateMotifSequenceMatchBeginP0A6D3189 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6D3184 ; faldo:reference isoform:P0A6D3-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6D3190 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . ?targetMotifMatch191 faldo:location ?targetMotifMatchRegionMatch192 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00210194 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6D3MF_00210185 . ?targetMotifMatchRegionMatch192 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00210193 . ?targetMotifMatchRegionMatchBeginMF_00210193 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00210186 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00210194 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6D3MF_00210183, 1, (STRLEN(?templateMotifCigarP0A6D3MF_00210183) - STRLEN(REPLACE(?templateMotifCigarP0A6D3MF_00210183, CONCAT('^(?:-*[^-]){', STR(((23 - ?templateMotifSequenceMatchBeginPositionP0A6D3184) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1195) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210185, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210185) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210185, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1195), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210185, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210185) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210185, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1195), '}'), '')))), '[^-]', ''))) AS ?step2196) . BIND(((?step2196 + ?targetMotifMatchRegionMatchBeginPositionMF_00210186) - 1) AS ?thisPositionOn37) . BIND(?thisPositionOn37 AS ?thisPositionOn38) . BIND(?this AS ?pfs1t197) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn37))) AS ?pfsb34) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn38))) AS ?pfse35) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn37, 1) = 'S')) . BIND(URI(CONCAT(STR(?this), '#MF_00210a33')) AS ?annotation33) . BIND(?this AS ?pfs32) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch202 faldo:location ?templateMotifSequenceMatchRegionP0A6D3203 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6D3205 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6D3MF_00210198 . ?templateMotifSequenceMatchRegionP0A6D3203 faldo:begin ?templateMotifSequenceMatchBeginP0A6D3204 . ?templateMotifSequenceMatchBeginP0A6D3204 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6D3199 ; faldo:reference isoform:P0A6D3-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6D3205 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . ?targetMotifMatch206 faldo:location ?targetMotifMatchRegionMatch207 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00210209 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6D3MF_00210200 . ?targetMotifMatchRegionMatch207 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00210208 . ?targetMotifMatchRegionMatchBeginMF_00210208 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00210201 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00210209 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6D3MF_00210198, 1, (STRLEN(?templateMotifCigarP0A6D3MF_00210198) - STRLEN(REPLACE(?templateMotifCigarP0A6D3MF_00210198, CONCAT('^(?:-*[^-]){', STR(((27 - ?templateMotifSequenceMatchBeginPositionP0A6D3199) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1210) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210200, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210200) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210200, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1210), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210200, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210200) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210200, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1210), '}'), '')))), '[^-]', ''))) AS ?step2211) . BIND(((?step2211 + ?targetMotifMatchRegionMatchBeginPositionMF_00210201) - 1) AS ?thisPositionOn44) . BIND(?thisPositionOn44 AS ?thisPositionOn45) . BIND(?this AS ?pfs1t212) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn44))) AS ?pfsb41) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn45))) AS ?pfse42) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn44, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_00210a40')) AS ?annotation40) . BIND(?this AS ?pfs39) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch217 faldo:location ?templateMotifSequenceMatchRegionP0A6D3218 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6D3220 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6D3MF_00210213 . ?templateMotifSequenceMatchRegionP0A6D3218 faldo:begin ?templateMotifSequenceMatchBeginP0A6D3219 . ?templateMotifSequenceMatchBeginP0A6D3219 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6D3214 ; faldo:reference isoform:P0A6D3-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6D3220 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . ?targetMotifMatch221 faldo:location ?targetMotifMatchRegionMatch222 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00210224 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6D3MF_00210215 . ?targetMotifMatchRegionMatch222 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00210223 . ?targetMotifMatchRegionMatchBeginMF_00210223 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00210216 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00210224 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6D3MF_00210213, 1, (STRLEN(?templateMotifCigarP0A6D3MF_00210213) - STRLEN(REPLACE(?templateMotifCigarP0A6D3MF_00210213, CONCAT('^(?:-*[^-]){', STR(((96 - ?templateMotifSequenceMatchBeginPositionP0A6D3214) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1225) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210215, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210215) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210215, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1225), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210215, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210215) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210215, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1225), '}'), '')))), '[^-]', ''))) AS ?step2226) . BIND(((?step2226 + ?targetMotifMatchRegionMatchBeginPositionMF_00210216) - 1) AS ?thisPositionOn51) . BIND(?thisPositionOn51 AS ?thisPositionOn52) . BIND(?this AS ?pfs1t227) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn51))) AS ?pfsb48) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn52))) AS ?pfse49) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn51, 1) = 'G')) . BIND(URI(CONCAT(STR(?this), '#MF_00210a47')) AS ?annotation47) . BIND(?this AS ?pfs46) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch232 faldo:location ?templateMotifSequenceMatchRegionP0A6D3233 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6D3235 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6D3MF_00210228 . ?templateMotifSequenceMatchRegionP0A6D3233 faldo:begin ?templateMotifSequenceMatchBeginP0A6D3234 . ?templateMotifSequenceMatchBeginP0A6D3234 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6D3229 ; faldo:reference isoform:P0A6D3-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6D3235 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . ?targetMotifMatch236 faldo:location ?targetMotifMatchRegionMatch237 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00210239 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6D3MF_00210230 . ?targetMotifMatchRegionMatch237 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00210238 . ?targetMotifMatchRegionMatchBeginMF_00210238 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00210231 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00210239 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6D3MF_00210228, 1, (STRLEN(?templateMotifCigarP0A6D3MF_00210228) - STRLEN(REPLACE(?templateMotifCigarP0A6D3MF_00210228, CONCAT('^(?:-*[^-]){', STR(((124 - ?templateMotifSequenceMatchBeginPositionP0A6D3229) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1240) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210230, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210230) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210230, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1240), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210230, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210230) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210230, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1240), '}'), '')))), '[^-]', ''))) AS ?step2241) . BIND(((?step2241 + ?targetMotifMatchRegionMatchBeginPositionMF_00210231) - 1) AS ?thisPositionOn58) . BIND(?thisPositionOn58 AS ?thisPositionOn59) . BIND(?this AS ?pfs1t242) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn58))) AS ?pfsb55) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn59))) AS ?pfse56) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn58, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_00210a54')) AS ?annotation54) . BIND(?this AS ?pfs53) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch247 faldo:location ?templateMotifSequenceMatchRegionP0A6D3248 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6D3250 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6D3MF_00210243 . ?templateMotifSequenceMatchRegionP0A6D3248 faldo:begin ?templateMotifSequenceMatchBeginP0A6D3249 . ?templateMotifSequenceMatchBeginP0A6D3249 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6D3244 ; faldo:reference isoform:P0A6D3-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6D3250 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . ?targetMotifMatch251 faldo:location ?targetMotifMatchRegionMatch252 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00210254 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6D3MF_00210245 . ?targetMotifMatchRegionMatch252 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00210253 . ?targetMotifMatchRegionMatchBeginMF_00210253 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00210246 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00210254 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6D3MF_00210243, 1, (STRLEN(?templateMotifCigarP0A6D3MF_00210243) - STRLEN(REPLACE(?templateMotifCigarP0A6D3MF_00210243, CONCAT('^(?:-*[^-]){', STR(((169 - ?templateMotifSequenceMatchBeginPositionP0A6D3244) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1255) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210245, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210245) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210245, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1255), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210245, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210245) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210245, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1255), '}'), '')))), '[^-]', ''))) AS ?step2256) . BIND(((?step2256 + ?targetMotifMatchRegionMatchBeginPositionMF_00210246) - 1) AS ?thisPositionOn65) . BIND(?thisPositionOn65 AS ?thisPositionOn66) . BIND(?this AS ?pfs1t257) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn65))) AS ?pfsb62) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn66))) AS ?pfse63) . FILTER (REGEX('[ST]', SUBSTR(?thisSequenceValue, ?thisPositionOn65, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_00210a61')) AS ?annotation61) . BIND(?this AS ?pfs60) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch262 faldo:location ?templateMotifSequenceMatchRegionP0A6D3263 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6D3265 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6D3MF_00210258 . ?templateMotifSequenceMatchRegionP0A6D3263 faldo:begin ?templateMotifSequenceMatchBeginP0A6D3264 . ?templateMotifSequenceMatchBeginP0A6D3264 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6D3259 ; faldo:reference isoform:P0A6D3-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6D3265 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . ?targetMotifMatch266 faldo:location ?targetMotifMatchRegionMatch267 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00210269 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6D3MF_00210260 . ?targetMotifMatchRegionMatch267 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00210268 . ?targetMotifMatchRegionMatchBeginMF_00210268 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00210261 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00210269 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6D3MF_00210258, 1, (STRLEN(?templateMotifCigarP0A6D3MF_00210258) - STRLEN(REPLACE(?templateMotifCigarP0A6D3MF_00210258, CONCAT('^(?:-*[^-]){', STR(((170 - ?templateMotifSequenceMatchBeginPositionP0A6D3259) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1270) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210260, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210260) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210260, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1270), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210260, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210260) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210260, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1270), '}'), '')))), '[^-]', ''))) AS ?step2271) . BIND(((?step2271 + ?targetMotifMatchRegionMatchBeginPositionMF_00210261) - 1) AS ?thisPositionOn72) . BIND(?thisPositionOn72 AS ?thisPositionOn73) . BIND(?this AS ?pfs1t272) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn72))) AS ?pfsb69) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn73))) AS ?pfse70) . FILTER (REGEX('[ST]', SUBSTR(?thisSequenceValue, ?thisPositionOn72, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_00210a68')) AS ?annotation68) . BIND(?this AS ?pfs67) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch277 faldo:location ?templateMotifSequenceMatchRegionP0A6D3278 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6D3280 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6D3MF_00210273 . ?templateMotifSequenceMatchRegionP0A6D3278 faldo:begin ?templateMotifSequenceMatchBeginP0A6D3279 . ?templateMotifSequenceMatchBeginP0A6D3279 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6D3274 ; faldo:reference isoform:P0A6D3-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6D3280 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . ?targetMotifMatch281 faldo:location ?targetMotifMatchRegionMatch282 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00210284 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6D3MF_00210275 . ?targetMotifMatchRegionMatch282 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00210283 . ?targetMotifMatchRegionMatchBeginMF_00210283 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00210276 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00210284 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6D3MF_00210273, 1, (STRLEN(?templateMotifCigarP0A6D3MF_00210273) - STRLEN(REPLACE(?templateMotifCigarP0A6D3MF_00210273, CONCAT('^(?:-*[^-]){', STR(((171 - ?templateMotifSequenceMatchBeginPositionP0A6D3274) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1285) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210275, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210275) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210275, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1285), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210275, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210275) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210275, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1285), '}'), '')))), '[^-]', ''))) AS ?step2286) . BIND(((?step2286 + ?targetMotifMatchRegionMatchBeginPositionMF_00210276) - 1) AS ?thisPositionOn79) . BIND(?thisPositionOn79 AS ?thisPositionOn80) . BIND(?this AS ?pfs1t287) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn79))) AS ?pfsb76) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn80))) AS ?pfse77) . FILTER (REGEX('[QN]', SUBSTR(?thisSequenceValue, ?thisPositionOn79, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_00210a75')) AS ?annotation75) . BIND(?this AS ?pfs74) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch292 faldo:location ?templateMotifSequenceMatchRegionP0A6D3293 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6D3295 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6D3MF_00210288 . ?templateMotifSequenceMatchRegionP0A6D3293 faldo:begin ?templateMotifSequenceMatchBeginP0A6D3294 . ?templateMotifSequenceMatchBeginP0A6D3294 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6D3289 ; faldo:reference isoform:P0A6D3-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6D3295 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . ?targetMotifMatch296 faldo:location ?targetMotifMatchRegionMatch297 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00210299 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6D3MF_00210290 . ?targetMotifMatchRegionMatch297 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00210298 . ?targetMotifMatchRegionMatchBeginMF_00210298 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00210291 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00210299 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6D3MF_00210288, 1, (STRLEN(?templateMotifCigarP0A6D3MF_00210288) - STRLEN(REPLACE(?templateMotifCigarP0A6D3MF_00210288, CONCAT('^(?:-*[^-]){', STR(((171 - ?templateMotifSequenceMatchBeginPositionP0A6D3289) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1300) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210290, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210290) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210290, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1300), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210290, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210290) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210290, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1300), '}'), '')))), '[^-]', ''))) AS ?step2301) . BIND(((?step2301 + ?targetMotifMatchRegionMatchBeginPositionMF_00210291) - 1) AS ?thisPositionOn86) . BIND(?thisPositionOn86 AS ?thisPositionOn87) . BIND(?this AS ?pfs1t302) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn86))) AS ?pfsb83) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn87))) AS ?pfse84) . FILTER (REGEX('[QN]', SUBSTR(?thisSequenceValue, ?thisPositionOn86, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_00210a82')) AS ?annotation82) . BIND(?this AS ?pfs81) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch307 faldo:location ?templateMotifSequenceMatchRegionP0A6D3308 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6D3310 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6D3MF_00210303 . ?templateMotifSequenceMatchRegionP0A6D3308 faldo:begin ?templateMotifSequenceMatchBeginP0A6D3309 . ?templateMotifSequenceMatchBeginP0A6D3309 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6D3304 ; faldo:reference isoform:P0A6D3-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6D3310 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . ?targetMotifMatch311 faldo:location ?targetMotifMatchRegionMatch312 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00210314 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6D3MF_00210305 . ?targetMotifMatchRegionMatch312 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00210313 . ?targetMotifMatchRegionMatchBeginMF_00210313 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00210306 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00210314 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6D3MF_00210303, 1, (STRLEN(?templateMotifCigarP0A6D3MF_00210303) - STRLEN(REPLACE(?templateMotifCigarP0A6D3MF_00210303, CONCAT('^(?:-*[^-]){', STR(((197 - ?templateMotifSequenceMatchBeginPositionP0A6D3304) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1315) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210305, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210305) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210305, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1315), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210305, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210305) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210305, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1315), '}'), '')))), '[^-]', ''))) AS ?step2316) . BIND(((?step2316 + ?targetMotifMatchRegionMatchBeginPositionMF_00210306) - 1) AS ?thisPositionOn93) . BIND(?thisPositionOn93 AS ?thisPositionOn94) . BIND(?this AS ?pfs1t317) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn93))) AS ?pfsb90) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn94))) AS ?pfse91) . FILTER (REGEX('[ST]', SUBSTR(?thisSequenceValue, ?thisPositionOn93, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_00210a89')) AS ?annotation89) . BIND(?this AS ?pfs88) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch322 faldo:location ?templateMotifSequenceMatchRegionP0A6D3323 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6D3325 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6D3MF_00210318 . ?templateMotifSequenceMatchRegionP0A6D3323 faldo:begin ?templateMotifSequenceMatchBeginP0A6D3324 . ?templateMotifSequenceMatchBeginP0A6D3324 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6D3319 ; faldo:reference isoform:P0A6D3-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6D3325 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . ?targetMotifMatch326 faldo:location ?targetMotifMatchRegionMatch327 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00210329 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6D3MF_00210320 . ?targetMotifMatchRegionMatch327 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00210328 . ?targetMotifMatchRegionMatchBeginMF_00210328 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00210321 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00210329 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6D3MF_00210318, 1, (STRLEN(?templateMotifCigarP0A6D3MF_00210318) - STRLEN(REPLACE(?templateMotifCigarP0A6D3MF_00210318, CONCAT('^(?:-*[^-]){', STR(((313 - ?templateMotifSequenceMatchBeginPositionP0A6D3319) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1330) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210320, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210320) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210320, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1330), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210320, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210320) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210320, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1330), '}'), '')))), '[^-]', ''))) AS ?step2331) . BIND(((?step2331 + ?targetMotifMatchRegionMatchBeginPositionMF_00210321) - 1) AS ?thisPositionOn100) . BIND(?thisPositionOn100 AS ?thisPositionOn101) . BIND(?this AS ?pfs1t332) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn100))) AS ?pfsb97) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn101))) AS ?pfse98) . FILTER (REGEX('[DE]', SUBSTR(?thisSequenceValue, ?thisPositionOn100, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_00210a96')) AS ?annotation96) . BIND(?this AS ?pfs95) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch337 faldo:location ?templateMotifSequenceMatchRegionP0A6D3338 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6D3340 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6D3MF_00210333 . ?templateMotifSequenceMatchRegionP0A6D3338 faldo:begin ?templateMotifSequenceMatchBeginP0A6D3339 . ?templateMotifSequenceMatchBeginP0A6D3339 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6D3334 ; faldo:reference isoform:P0A6D3-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6D3340 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . ?targetMotifMatch341 faldo:location ?targetMotifMatchRegionMatch342 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00210344 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6D3MF_00210335 . ?targetMotifMatchRegionMatch342 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00210343 . ?targetMotifMatchRegionMatchBeginMF_00210343 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00210336 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00210344 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6D3MF_00210333, 1, (STRLEN(?templateMotifCigarP0A6D3MF_00210333) - STRLEN(REPLACE(?templateMotifCigarP0A6D3MF_00210333, CONCAT('^(?:-*[^-]){', STR(((336 - ?templateMotifSequenceMatchBeginPositionP0A6D3334) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1345) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210335, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210335) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210335, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1345), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210335, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210335) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210335, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1345), '}'), '')))), '[^-]', ''))) AS ?step2346) . BIND(((?step2346 + ?targetMotifMatchRegionMatchBeginPositionMF_00210336) - 1) AS ?thisPositionOn107) . BIND(?thisPositionOn107 AS ?thisPositionOn108) . BIND(?this AS ?pfs1t347) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn107))) AS ?pfsb104) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn108))) AS ?pfse105) . FILTER (REGEX('[NQ]', SUBSTR(?thisSequenceValue, ?thisPositionOn107, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_00210a103')) AS ?annotation103) . BIND(?this AS ?pfs102) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch352 faldo:location ?templateMotifSequenceMatchRegionP0A6D3353 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6D3355 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6D3MF_00210348 . ?templateMotifSequenceMatchRegionP0A6D3353 faldo:begin ?templateMotifSequenceMatchBeginP0A6D3354 . ?templateMotifSequenceMatchBeginP0A6D3354 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6D3349 ; faldo:reference isoform:P0A6D3-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6D3355 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . ?targetMotifMatch356 faldo:location ?targetMotifMatchRegionMatch357 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00210359 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6D3MF_00210350 . ?targetMotifMatchRegionMatch357 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00210358 . ?targetMotifMatchRegionMatchBeginMF_00210358 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00210351 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00210359 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6D3MF_00210348, 1, (STRLEN(?templateMotifCigarP0A6D3MF_00210348) - STRLEN(REPLACE(?templateMotifCigarP0A6D3MF_00210348, CONCAT('^(?:-*[^-]){', STR(((340 - ?templateMotifSequenceMatchBeginPositionP0A6D3349) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1360) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210350, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210350) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210350, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1360), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210350, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210350) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210350, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1360), '}'), '')))), '[^-]', ''))) AS ?step2361) . BIND(((?step2361 + ?targetMotifMatchRegionMatchBeginPositionMF_00210351) - 1) AS ?thisPositionOn114) . BIND(?thisPositionOn114 AS ?thisPositionOn115) . BIND(?this AS ?pfs1t362) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn114))) AS ?pfsb111) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn115))) AS ?pfse112) . FILTER (REGEX('[KHQ]', SUBSTR(?thisSequenceValue, ?thisPositionOn114, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_00210a110')) AS ?annotation110) . BIND(?this AS ?pfs109) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch367 faldo:location ?templateMotifSequenceMatchRegionP0A6D3368 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6D3370 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6D3MF_00210363 . ?templateMotifSequenceMatchRegionP0A6D3368 faldo:begin ?templateMotifSequenceMatchBeginP0A6D3369 . ?templateMotifSequenceMatchBeginP0A6D3369 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6D3364 ; faldo:reference isoform:P0A6D3-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6D3370 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . ?targetMotifMatch371 faldo:location ?targetMotifMatchRegionMatch372 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00210374 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6D3MF_00210365 . ?targetMotifMatchRegionMatch372 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00210373 . ?targetMotifMatchRegionMatchBeginMF_00210373 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00210366 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00210374 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6D3MF_00210363, 1, (STRLEN(?templateMotifCigarP0A6D3MF_00210363) - STRLEN(REPLACE(?templateMotifCigarP0A6D3MF_00210363, CONCAT('^(?:-*[^-]){', STR(((344 - ?templateMotifSequenceMatchBeginPositionP0A6D3364) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1375) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210365, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210365) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210365, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1375), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210365, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210365) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210365, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1375), '}'), '')))), '[^-]', ''))) AS ?step2376) . BIND(((?step2376 + ?targetMotifMatchRegionMatchBeginPositionMF_00210366) - 1) AS ?thisPositionOn121) . BIND(?thisPositionOn121 AS ?thisPositionOn122) . BIND(?this AS ?pfs1t377) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn121))) AS ?pfsb118) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn122))) AS ?pfse119) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn121, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_00210a117')) AS ?annotation117) . BIND(?this AS ?pfs116) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch382 faldo:location ?templateMotifSequenceMatchRegionP0A6D3383 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6D3385 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6D3MF_00210378 . ?templateMotifSequenceMatchRegionP0A6D3383 faldo:begin ?templateMotifSequenceMatchBeginP0A6D3384 . ?templateMotifSequenceMatchBeginP0A6D3384 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6D3379 ; faldo:reference isoform:P0A6D3-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6D3385 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . ?targetMotifMatch386 faldo:location ?targetMotifMatchRegionMatch387 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00210389 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6D3MF_00210380 . ?targetMotifMatchRegionMatch387 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00210388 . ?targetMotifMatchRegionMatchBeginMF_00210388 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00210381 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00210389 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6D3MF_00210378, 1, (STRLEN(?templateMotifCigarP0A6D3MF_00210378) - STRLEN(REPLACE(?templateMotifCigarP0A6D3MF_00210378, CONCAT('^(?:-*[^-]){', STR(((386 - ?templateMotifSequenceMatchBeginPositionP0A6D3379) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1390) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210380, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210380) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210380, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1390), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210380, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210380) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210380, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1390), '}'), '')))), '[^-]', ''))) AS ?step2391) . BIND(((?step2391 + ?targetMotifMatchRegionMatchBeginPositionMF_00210381) - 1) AS ?thisPositionOn128) . BIND(?thisPositionOn128 AS ?thisPositionOn129) . BIND(?this AS ?pfs1t392) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn128))) AS ?pfsb125) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn129))) AS ?pfse126) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn128, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_00210a124')) AS ?annotation124) . BIND(?this AS ?pfs123) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch397 faldo:location ?templateMotifSequenceMatchRegionP0A6D3398 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6D3400 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6D3MF_00210393 . ?templateMotifSequenceMatchRegionP0A6D3398 faldo:begin ?templateMotifSequenceMatchBeginP0A6D3399 . ?templateMotifSequenceMatchBeginP0A6D3399 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6D3394 ; faldo:reference isoform:P0A6D3-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6D3400 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . ?targetMotifMatch401 faldo:location ?targetMotifMatchRegionMatch402 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00210404 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6D3MF_00210395 . ?targetMotifMatchRegionMatch402 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00210403 . ?targetMotifMatchRegionMatchBeginMF_00210403 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00210396 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00210404 edam:has_input signature:MF_00210 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6D3MF_00210393, 1, (STRLEN(?templateMotifCigarP0A6D3MF_00210393) - STRLEN(REPLACE(?templateMotifCigarP0A6D3MF_00210393, CONCAT('^(?:-*[^-]){', STR(((411 - ?templateMotifSequenceMatchBeginPositionP0A6D3394) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1405) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210395, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210395) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210395, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1405), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6D3MF_00210395, 1, (STRLEN(?targetMotifMatchCigarP0A6D3MF_00210395) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6D3MF_00210395, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1405), '}'), '')))), '[^-]', ''))) AS ?step2406) . BIND(((?step2406 + ?targetMotifMatchRegionMatchBeginPositionMF_00210396) - 1) AS ?thisPositionOn135) . BIND(?thisPositionOn135 AS ?thisPositionOn136) . BIND(?this AS ?pfs1t407) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn135))) AS ?pfsb132) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn136))) AS ?pfse133) . FILTER (REGEX('[KQ]', SUBSTR(?thisSequenceValue, ?thisPositionOn135, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_00210a131')) AS ?annotation131) . BIND(?this AS ?pfs130) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(?this AS ?case10) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(?this AS ?case11) . } }