CONSTRUCT { _:121623 up:source unirule:MF_00297 . _:121624 up:source unirule:MF_00297 . _:121625 up:source unirule:MF_00297 . _:121626 up:source unirule:MF_00297 . _:121627 up:source unirule:MF_00297 . _:121628 up:source unirule:MF_00297 . _:121629 up:source unirule:MF_00297 . _:121630 up:source unirule:MF_00297 . _:121631 up:source unirule:MF_00297 . _:121632 up:source unirule:MF_00297 . _:121633 up:source unirule:MF_00297 . _:121634 up:source unirule:MF_00297 . _:121635 up:source unirule:MF_00297 . _:121636 up:source unirule:MF_00297 . _:121637 up:source unirule:MF_00297 . _:121638 up:source unirule:MF_00297 . _:121639 up:source unirule:MF_00297 . _:121640 up:source unirule:MF_00297 . _:121641 up:source unirule:MF_00297 . _:121642 up:source unirule:MF_00297 . _:121643 up:source unirule:MF_00297 . _:121644 up:source unirule:MF_00297 . _:121645 up:source unirule:MF_00297 . _:121646 up:source unirule:MF_00297 . _:121647 up:source unirule:MF_00297 . _:121648 up:source unirule:MF_00297 . _:121649 up:source unirule:MF_00297 . _:121650 up:source unirule:MF_00297 . _:121651 up:source unirule:MF_00297 . _:121652 up:source unirule:MF_00297 . _:121653 up:source unirule:MF_00297 . _:121654 up:source unirule:MF_00297 . _:121655 up:source unirule:MF_00297 . _:121656 up:source unirule:MF_00297 . _:121657 up:source unirule:MF_00297 . _:121658 up:source unirule:MF_00297 . _:121659 up:source unirule:MF_00297 . _:121660 up:source unirule:MF_00297 . ?this up:alternativeName ?name1 ; up:annotation ?annotation3 , ?annotation4 , ?annotation6 , ?annotation8 , ?annotation10 , ?annotation11 , ?annotation12 ; up:classifiedWith GO:0000210 , GO:0000287 , GO:0030145 , keyword:378 , keyword:460 , keyword:464 , keyword:479 , keyword:520 ; up:recommendedName ?name0 . ?name0 up:ecName '3.6.1.-' ; up:fullName 'NAD-capped RNA hydrolase NudC' ; up:shortName 'DeNADding enzyme NudC' ; rdf:type up:Structured_Name . ?name1 up:ecName '3.6.1.22' ; up:fullName 'NADH pyrophosphatase' ; rdf:type up:Structured_Name . ?gene2 skos:prefLabel 'nudC' . ?annotation3 a up:Function_Annotation ; rdfs:comment "mRNA decapping enzyme that specifically removes the nicotinamide adenine dinucleotide (NAD) cap from a subset of mRNAs by hydrolyzing the diphosphate linkage to produce nicotinamide mononucleotide (NMN) and 5' monophosphate mRNA. The NAD-cap is present at the 5'-end of some mRNAs and stabilizes RNA against 5'-processing. Has preference for mRNAs with a 5'-end purine. Catalyzes the hydrolysis of a broad range of dinucleotide pyrophosphates." . ?annotation4 up:activity ?activity5 ; rdf:type up:Catalytic_Activity_Annotation . ?activity5 up:catalyticActivity <http://rdf.rhea-db.org/60876>. ?annotation6 up:activity ?activity7 ; rdf:type up:Catalytic_Activity_Annotation . ?activity7 up:catalyticActivity <http://rdf.rhea-db.org/11800>; up:enzymeClass <http://purl.uniprot.org/enzyme/3.6.1.22>. ?annotation8 up:activity ?activity9 ; rdf:type up:Catalytic_Activity_Annotation . ?activity9 up:catalyticActivity <http://rdf.rhea-db.org/48868>; up:enzymeClass <http://purl.uniprot.org/enzyme/3.6.1.22>. ?annotation10 up:cofactor chebi:18420 , chebi:29035 ; rdf:type up:Cofactor_Annotation ; rdfs:comment 'Divalent metal cations. Mg(2+) or Mn(2+).' . ?annotation11 a up:Subunit_Annotation ; rdfs:comment 'Homodimer.' . ?annotation12 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the Nudix hydrolase family. NudC subfamily.' . ?case13 up:classifiedWith GO:0008270 , keyword:862 . ?pfs14 up:annotation ?annotation15 . ?annotation15 faldo:begin ?pfsb16 ; faldo:end ?pfse17 ; up:ligand ?ligand18 ; rdf:type up:Binding_Site_Annotation . ?pfsb16 faldo:position ?thisPositionOn19 ; rdf:type faldo:ExactPosition . ?pfse17 faldo:position ?thisPositionOn20 ; rdf:type faldo:ExactPosition . ?ligand18 rdfs:subClassOf chebi:29105 . ?pfs21 up:annotation ?annotation22 . ?annotation22 faldo:begin ?pfsb23 ; faldo:end ?pfse24 ; up:ligand ?ligand25 ; rdf:type up:Binding_Site_Annotation . ?pfsb23 faldo:position ?thisPositionOn26 ; rdf:type faldo:ExactPosition . ?pfse24 faldo:position ?thisPositionOn27 ; rdf:type faldo:ExactPosition . ?ligand25 rdfs:subClassOf chebi:29105 . ?pfs28 up:annotation ?annotation29 . ?annotation29 faldo:begin ?pfsb30 ; faldo:end ?pfse31 ; up:ligand ?ligand32 ; rdf:type up:Binding_Site_Annotation . ?pfsb30 faldo:position ?thisPositionOn33 ; rdf:type faldo:ExactPosition . ?pfse31 faldo:position ?thisPositionOn34 ; rdf:type faldo:ExactPosition . ?ligand32 rdfs:subClassOf chebi:29105 . ?pfs35 up:annotation ?annotation36 . ?annotation36 faldo:begin ?pfsb37 ; faldo:end ?pfse38 ; up:ligand ?ligand39 ; rdf:type up:Binding_Site_Annotation . ?pfsb37 faldo:position ?thisPositionOn40 ; rdf:type faldo:ExactPosition . ?pfse38 faldo:position ?thisPositionOn41 ; rdf:type faldo:ExactPosition . ?ligand39 rdfs:subClassOf chebi:29105 . ?pfs42 up:annotation ?annotation43 . ?annotation43 faldo:begin ?pfsb44 ; faldo:end ?pfse45 ; rdf:type up:Motif_Annotation ; rdfs:comment 'Nudix box' . ?pfsb44 faldo:position ?thisPositionOn46 ; rdf:type faldo:ExactPosition . ?pfse45 faldo:position ?thisPositionOn47 ; rdf:type faldo:ExactPosition . ?pfs48 up:annotation ?annotation49 . ?annotation49 faldo:begin ?pfsb50 ; faldo:end ?pfse51 ; up:ligand ?ligand52 ; rdf:type up:Binding_Site_Annotation . ?pfsb50 faldo:position ?thisPositionOn54 ; rdf:type faldo:ExactPosition . ?pfse51 faldo:position ?thisPositionOn55 ; rdf:type faldo:ExactPosition . ?ligand52 rdfs:subClassOf ?molecule53 . ?molecule53 rdfs:label 'substrate' . ?pfs56 up:annotation ?annotation57 . ?annotation57 faldo:begin ?pfsb58 ; faldo:end ?pfse59 ; up:ligand ?ligand60 ; rdf:type up:Binding_Site_Annotation . ?pfsb58 faldo:position ?thisPositionOn61 ; rdf:type faldo:ExactPosition . ?pfse59 faldo:position ?thisPositionOn62 ; rdf:type faldo:ExactPosition . ?ligand60 rdfs:subClassOf chebi:60240 . ?pfs63 up:annotation ?annotation64 . ?annotation64 faldo:begin ?pfsb65 ; faldo:end ?pfse66 ; up:ligand ?ligand67 ; rdf:type up:Binding_Site_Annotation . ?pfsb65 faldo:position ?thisPositionOn68 ; rdf:type faldo:ExactPosition . ?pfse66 faldo:position ?thisPositionOn69 ; rdf:type faldo:ExactPosition . ?ligand67 rdfs:subClassOf chebi:60240 . ?pfs70 up:annotation ?annotation71 . ?annotation71 faldo:begin ?pfsb72 ; faldo:end ?pfse73 ; up:ligand ?ligand74 ; rdf:type up:Binding_Site_Annotation . ?pfsb72 faldo:position ?thisPositionOn75 ; rdf:type faldo:ExactPosition . ?pfse73 faldo:position ?thisPositionOn76 ; rdf:type faldo:ExactPosition . ?ligand74 rdfs:subClassOf chebi:60240 . ?pfs77 up:annotation ?annotation78 . ?annotation78 faldo:begin ?pfsb79 ; faldo:end ?pfse80 ; up:ligand ?ligand81 ; rdf:type up:Binding_Site_Annotation . ?pfsb79 faldo:position ?thisPositionOn82 ; rdf:type faldo:ExactPosition . ?pfse80 faldo:position ?thisPositionOn83 ; rdf:type faldo:ExactPosition . ?ligand81 rdfs:subClassOf chebi:60240 . ?pfs84 up:annotation ?annotation85 . ?annotation85 faldo:begin ?pfsb86 ; faldo:end ?pfse87 ; up:ligand ?ligand88 ; rdf:type up:Binding_Site_Annotation . ?pfsb86 faldo:position ?thisPositionOn89 ; rdf:type faldo:ExactPosition . ?pfse87 faldo:position ?thisPositionOn90 ; rdf:type faldo:ExactPosition . ?ligand88 rdfs:subClassOf chebi:60240 . ?pfs91 up:annotation ?annotation92 . ?annotation92 faldo:begin ?pfsb93 ; faldo:end ?pfse94 ; up:ligand ?ligand95 ; rdf:type up:Binding_Site_Annotation . ?pfsb93 faldo:position ?thisPositionOn96 ; rdf:type faldo:ExactPosition . ?pfse94 faldo:position ?thisPositionOn97 ; rdf:type faldo:ExactPosition . ?ligand95 rdfs:subClassOf chebi:60240 . ?pfs98 up:annotation ?annotation99 . ?annotation99 faldo:begin ?pfsb100 ; faldo:end ?pfse101 ; up:ligand ?ligand102 ; rdf:type up:Binding_Site_Annotation . ?pfsb100 faldo:position ?thisPositionOn103 ; rdf:type faldo:ExactPosition . ?pfse101 faldo:position ?thisPositionOn104 ; rdf:type faldo:ExactPosition . ?ligand102 rdfs:subClassOf chebi:60240 . ?pfs105 up:annotation ?annotation106 . ?annotation106 faldo:begin ?pfsb107 ; faldo:end ?pfse108 ; up:ligand ?ligand109 ; rdf:type up:Binding_Site_Annotation . ?pfsb107 faldo:position ?thisPositionOn111 ; rdf:type faldo:ExactPosition . ?pfse108 faldo:position ?thisPositionOn112 ; rdf:type faldo:ExactPosition . ?ligand109 rdfs:subClassOf ?molecule110 . ?molecule110 rdfs:label 'substrate' . ?pfs113 up:annotation ?annotation114 . ?annotation114 faldo:begin ?pfsb115 ; faldo:end ?pfse116 ; up:ligand ?ligand117 ; rdf:type up:Binding_Site_Annotation . ?pfsb115 faldo:position ?thisPositionOn119 ; rdf:type faldo:ExactPosition . ?pfse116 faldo:position ?thisPositionOn120 ; rdf:type faldo:ExactPosition . ?ligand117 rdfs:subClassOf ?molecule118 . ?molecule118 rdfs:label 'substrate' . ?pfs121 up:annotation ?annotation122 . ?annotation122 faldo:begin ?pfsb123 ; faldo:end ?pfse124 ; up:ligand ?ligand125 ; rdf:type up:Binding_Site_Annotation . ?pfsb123 faldo:position ?thisPositionOn127 ; rdf:type faldo:ExactPosition . ?pfse124 faldo:position ?thisPositionOn128 ; rdf:type faldo:ExactPosition . ?ligand125 rdfs:subClassOf ?molecule126 . ?molecule126 rdfs:label 'substrate' . ?pfs129 up:annotation ?annotation130 . ?annotation130 faldo:begin ?pfsb131 ; faldo:end ?pfse132 ; up:ligand ?ligand133 ; rdf:type up:Binding_Site_Annotation . ?pfsb131 faldo:position ?thisPositionOn135 ; rdf:type faldo:ExactPosition . ?pfse132 faldo:position ?thisPositionOn136 ; rdf:type faldo:ExactPosition . ?ligand133 rdfs:subClassOf ?molecule134 . ?molecule134 rdfs:label 'substrate' . ?pfs137 up:annotation ?annotation138 . ?annotation138 faldo:begin ?pfsb139 ; faldo:end ?pfse140 ; up:ligand ?ligand141 ; rdf:type up:Binding_Site_Annotation . ?pfsb139 faldo:position ?thisPositionOn143 ; rdf:type faldo:ExactPosition . ?pfse140 faldo:position ?thisPositionOn144 ; rdf:type faldo:ExactPosition . ?ligand141 rdfs:subClassOf ?molecule142 . ?molecule142 rdfs:label 'substrate' . _:121661 a rdf:Statement ; up:attribution _:121623 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:121662 a rdf:Statement ; up:attribution _:121624 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name1 . _:121663 a rdf:Statement ; up:attribution _:121625 ; rdf:subject ?gene2 ; rdf:predicate up:encodedBy ; rdf:object ?gene2 . _:121664 a rdf:Statement ; up:attribution _:121626 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:121665 a rdf:Statement ; up:attribution _:121627 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:121666 a rdf:Statement ; up:attribution _:121628 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:121667 a rdf:Statement ; up:attribution _:121629 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation8 . _:121668 a rdf:Statement ; up:attribution _:121630 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation10 . _:121669 a rdf:Statement ; up:attribution _:121631 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:121670 a rdf:Statement ; up:attribution _:121632 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:121671 a rdf:Statement ; up:attribution _:121633 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:378 . _:121672 a rdf:Statement ; up:attribution _:121634 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:460 . _:121673 a rdf:Statement ; up:attribution _:121635 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:464 . _:121674 a rdf:Statement ; up:attribution _:121636 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:121675 a rdf:Statement ; up:attribution _:121637 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:520 . _:121676 a rdf:Statement ; up:attribution _:121638 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0000210 . _:121677 a rdf:Statement ; up:attribution _:121639 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0000287 . _:121678 a rdf:Statement ; up:attribution _:121640 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0030145 . _:121679 a rdf:Statement ; up:attribution _:121641 ; rdf:subject ?case13 ; rdf:predicate up:classifiedWith ; rdf:object keyword:862 . _:121680 a rdf:Statement ; up:attribution _:121642 ; rdf:subject ?case13 ; rdf:predicate up:classifiedWith ; rdf:object GO:0008270 . _:121681 a rdf:Statement ; up:source unirule:MF_00297 ; rdf:subject ?pfs14 ; rdf:predicate up:annotation ; rdf:object ?annotation15 . _:121682 a rdf:Statement ; up:attribution _:121643 ; rdf:subject ?pfs14 ; rdf:predicate up:annotation ; rdf:object ?annotation15 . _:121683 a rdf:Statement ; up:source unirule:MF_00297 ; rdf:subject ?pfs21 ; rdf:predicate up:annotation ; rdf:object ?annotation22 . _:121684 a rdf:Statement ; up:attribution _:121644 ; rdf:subject ?pfs21 ; rdf:predicate up:annotation ; rdf:object ?annotation22 . _:121685 a rdf:Statement ; up:source unirule:MF_00297 ; rdf:subject ?pfs28 ; rdf:predicate up:annotation ; rdf:object ?annotation29 . _:121686 a rdf:Statement ; up:attribution _:121645 ; rdf:subject ?pfs28 ; rdf:predicate up:annotation ; rdf:object ?annotation29 . _:121687 a rdf:Statement ; up:source unirule:MF_00297 ; rdf:subject ?pfs35 ; rdf:predicate up:annotation ; rdf:object ?annotation36 . _:121688 a rdf:Statement ; up:attribution _:121646 ; rdf:subject ?pfs35 ; rdf:predicate up:annotation ; rdf:object ?annotation36 . _:121689 a rdf:Statement ; up:source unirule:MF_00297 ; rdf:subject ?pfs42 ; rdf:predicate up:annotation ; rdf:object ?annotation43 . _:121690 a rdf:Statement ; up:attribution _:121647 ; rdf:subject ?pfs42 ; rdf:predicate up:annotation ; rdf:object ?annotation43 . _:121691 a rdf:Statement ; up:source unirule:MF_00297 ; rdf:subject ?pfs48 ; rdf:predicate up:annotation ; rdf:object ?annotation49 . _:121692 a rdf:Statement ; up:attribution _:121648 ; rdf:subject ?pfs48 ; rdf:predicate up:annotation ; rdf:object ?annotation49 . _:121693 a rdf:Statement ; up:source unirule:MF_00297 ; rdf:subject ?pfs56 ; rdf:predicate up:annotation ; rdf:object ?annotation57 . _:121694 a rdf:Statement ; up:attribution _:121649 ; rdf:subject ?pfs56 ; rdf:predicate up:annotation ; rdf:object ?annotation57 . _:121695 a rdf:Statement ; up:source unirule:MF_00297 ; rdf:subject ?pfs63 ; rdf:predicate up:annotation ; rdf:object ?annotation64 . _:121696 a rdf:Statement ; up:attribution _:121650 ; rdf:subject ?pfs63 ; rdf:predicate up:annotation ; rdf:object ?annotation64 . _:121697 a rdf:Statement ; up:source unirule:MF_00297 ; rdf:subject ?pfs70 ; rdf:predicate up:annotation ; rdf:object ?annotation71 . _:121698 a rdf:Statement ; up:attribution _:121651 ; rdf:subject ?pfs70 ; rdf:predicate up:annotation ; rdf:object ?annotation71 . _:121699 a rdf:Statement ; up:source unirule:MF_00297 ; rdf:subject ?pfs77 ; rdf:predicate up:annotation ; rdf:object ?annotation78 . _:121700 a rdf:Statement ; up:attribution _:121652 ; rdf:subject ?pfs77 ; rdf:predicate up:annotation ; rdf:object ?annotation78 . _:121701 a rdf:Statement ; up:source unirule:MF_00297 ; rdf:subject ?pfs84 ; rdf:predicate up:annotation ; rdf:object ?annotation85 . _:121702 a rdf:Statement ; up:attribution _:121653 ; rdf:subject ?pfs84 ; rdf:predicate up:annotation ; rdf:object ?annotation85 . _:121703 a rdf:Statement ; up:source unirule:MF_00297 ; rdf:subject ?pfs91 ; rdf:predicate up:annotation ; rdf:object ?annotation92 . _:121704 a rdf:Statement ; up:attribution _:121654 ; rdf:subject ?pfs91 ; rdf:predicate up:annotation ; rdf:object ?annotation92 . _:121705 a rdf:Statement ; up:source unirule:MF_00297 ; rdf:subject ?pfs98 ; rdf:predicate up:annotation ; rdf:object ?annotation99 . _:121706 a rdf:Statement ; up:attribution _:121655 ; rdf:subject ?pfs98 ; rdf:predicate up:annotation ; rdf:object ?annotation99 . _:121707 a rdf:Statement ; up:source unirule:MF_00297 ; rdf:subject ?pfs105 ; rdf:predicate up:annotation ; rdf:object ?annotation106 . _:121708 a rdf:Statement ; up:attribution _:121656 ; rdf:subject ?pfs105 ; rdf:predicate up:annotation ; rdf:object ?annotation106 . _:121709 a rdf:Statement ; up:source unirule:MF_00297 ; rdf:subject ?pfs113 ; rdf:predicate up:annotation ; rdf:object ?annotation114 . _:121710 a rdf:Statement ; up:attribution _:121657 ; rdf:subject ?pfs113 ; rdf:predicate up:annotation ; rdf:object ?annotation114 . _:121711 a rdf:Statement ; up:source unirule:MF_00297 ; rdf:subject ?pfs121 ; rdf:predicate up:annotation ; rdf:object ?annotation122 . _:121712 a rdf:Statement ; up:attribution _:121658 ; rdf:subject ?pfs121 ; rdf:predicate up:annotation ; rdf:object ?annotation122 . _:121713 a rdf:Statement ; up:source unirule:MF_00297 ; rdf:subject ?pfs129 ; rdf:predicate up:annotation ; rdf:object ?annotation130 . _:121714 a rdf:Statement ; up:attribution _:121659 ; rdf:subject ?pfs129 ; rdf:predicate up:annotation ; rdf:object ?annotation130 . _:121715 a rdf:Statement ; up:source unirule:MF_00297 ; rdf:subject ?pfs137 ; rdf:predicate up:annotation ; rdf:object ?annotation138 . _:121716 a rdf:Statement ; up:attribution _:121660 ; rdf:subject ?pfs137 ; rdf:predicate up:annotation ; rdf:object ?annotation138 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00297 #Rule MF_00297 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2024-09-02 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00297 . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(URI(CONCAT(STR(?this), '#MF_00297a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_00297a1')) AS ?name1) . BIND(URI(CONCAT(STR(?this), '#MF_00297a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_00297a4')) AS ?annotation4) . BIND(URI(CONCAT(STR(?this), '#MF_00297a6')) AS ?annotation6) . BIND(URI(CONCAT(STR(?this), '#MF_00297a8')) AS ?annotation8) . BIND(URI(CONCAT(STR(?this), '#MF_00297a10')) AS ?annotation10) . BIND(URI(CONCAT(STR(?this), '#MF_00297a11')) AS ?annotation11) . BIND(URI(CONCAT(STR(?this), '#MF_00297a12')) AS ?annotation12) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch149 faldo:location ?templateMotifSequenceMatchRegionP32664150 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP32664152 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP32664MF_00297145 . ?templateMotifSequenceMatchRegionP32664150 faldo:begin ?templateMotifSequenceMatchBeginP32664151 . ?templateMotifSequenceMatchBeginP32664151 faldo:position ?templateMotifSequenceMatchBeginPositionP32664146 ; faldo:reference isoform:P32664-1 . ?templateMotifSequenceProfileAlignmentOperationP32664152 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . ?targetMotifMatch153 faldo:location ?targetMotifMatchRegionMatch154 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00297156 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP32664MF_00297147 . ?targetMotifMatchRegionMatch154 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00297155 . ?targetMotifMatchRegionMatchBeginMF_00297155 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00297148 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00297156 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagzinc) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP32664MF_00297145, 1, (STRLEN(?templateMotifCigarP32664MF_00297145) - STRLEN(REPLACE(?templateMotifCigarP32664MF_00297145, CONCAT('^(?:-*[^-]){', STR(((98 - ?templateMotifSequenceMatchBeginPositionP32664146) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1157) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP32664MF_00297147, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297147) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297147, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1157), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP32664MF_00297147, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297147) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297147, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1157), '}'), '')))), '[^-]', ''))) AS ?step2158) . BIND(((?step2158 + ?targetMotifMatchRegionMatchBeginPositionMF_00297148) - 1) AS ?thisPositionOn19) . BIND(?thisPositionOn19 AS ?thisPositionOn20) . BIND(?this AS ?pfs1t159) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfsb16) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn20))) AS ?pfse17) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn19, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_00297a15')) AS ?annotation15) . BIND(?this AS ?pfs14) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch164 faldo:location ?templateMotifSequenceMatchRegionP32664165 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP32664167 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP32664MF_00297160 . ?templateMotifSequenceMatchRegionP32664165 faldo:begin ?templateMotifSequenceMatchBeginP32664166 . ?templateMotifSequenceMatchBeginP32664166 faldo:position ?templateMotifSequenceMatchBeginPositionP32664161 ; faldo:reference isoform:P32664-1 . ?templateMotifSequenceProfileAlignmentOperationP32664167 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . ?targetMotifMatch168 faldo:location ?targetMotifMatchRegionMatch169 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00297171 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP32664MF_00297162 . ?targetMotifMatchRegionMatch169 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00297170 . ?targetMotifMatchRegionMatchBeginMF_00297170 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00297163 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00297171 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagzinc) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP32664MF_00297160, 1, (STRLEN(?templateMotifCigarP32664MF_00297160) - STRLEN(REPLACE(?templateMotifCigarP32664MF_00297160, CONCAT('^(?:-*[^-]){', STR(((101 - ?templateMotifSequenceMatchBeginPositionP32664161) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1172) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP32664MF_00297162, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297162) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297162, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1172), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP32664MF_00297162, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297162) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297162, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1172), '}'), '')))), '[^-]', ''))) AS ?step2173) . BIND(((?step2173 + ?targetMotifMatchRegionMatchBeginPositionMF_00297163) - 1) AS ?thisPositionOn26) . BIND(?thisPositionOn26 AS ?thisPositionOn27) . BIND(?this AS ?pfs1t174) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn26))) AS ?pfsb23) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn27))) AS ?pfse24) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn26, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_00297a22')) AS ?annotation22) . BIND(?this AS ?pfs21) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch179 faldo:location ?templateMotifSequenceMatchRegionP32664180 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP32664182 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP32664MF_00297175 . ?templateMotifSequenceMatchRegionP32664180 faldo:begin ?templateMotifSequenceMatchBeginP32664181 . ?templateMotifSequenceMatchBeginP32664181 faldo:position ?templateMotifSequenceMatchBeginPositionP32664176 ; faldo:reference isoform:P32664-1 . ?templateMotifSequenceProfileAlignmentOperationP32664182 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . ?targetMotifMatch183 faldo:location ?targetMotifMatchRegionMatch184 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00297186 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP32664MF_00297177 . ?targetMotifMatchRegionMatch184 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00297185 . ?targetMotifMatchRegionMatchBeginMF_00297185 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00297178 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00297186 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagzinc) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP32664MF_00297175, 1, (STRLEN(?templateMotifCigarP32664MF_00297175) - STRLEN(REPLACE(?templateMotifCigarP32664MF_00297175, CONCAT('^(?:-*[^-]){', STR(((116 - ?templateMotifSequenceMatchBeginPositionP32664176) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1187) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP32664MF_00297177, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297177) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297177, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1187), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP32664MF_00297177, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297177) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297177, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1187), '}'), '')))), '[^-]', ''))) AS ?step2188) . BIND(((?step2188 + ?targetMotifMatchRegionMatchBeginPositionMF_00297178) - 1) AS ?thisPositionOn33) . BIND(?thisPositionOn33 AS ?thisPositionOn34) . BIND(?this AS ?pfs1t189) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfsb30) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn34))) AS ?pfse31) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn33, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_00297a29')) AS ?annotation29) . BIND(?this AS ?pfs28) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch194 faldo:location ?templateMotifSequenceMatchRegionP32664195 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP32664197 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP32664MF_00297190 . ?templateMotifSequenceMatchRegionP32664195 faldo:begin ?templateMotifSequenceMatchBeginP32664196 . ?templateMotifSequenceMatchBeginP32664196 faldo:position ?templateMotifSequenceMatchBeginPositionP32664191 ; faldo:reference isoform:P32664-1 . ?templateMotifSequenceProfileAlignmentOperationP32664197 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . ?targetMotifMatch198 faldo:location ?targetMotifMatchRegionMatch199 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00297201 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP32664MF_00297192 . ?targetMotifMatchRegionMatch199 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00297200 . ?targetMotifMatchRegionMatchBeginMF_00297200 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00297193 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00297201 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagzinc) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP32664MF_00297190, 1, (STRLEN(?templateMotifCigarP32664MF_00297190) - STRLEN(REPLACE(?templateMotifCigarP32664MF_00297190, CONCAT('^(?:-*[^-]){', STR(((119 - ?templateMotifSequenceMatchBeginPositionP32664191) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1202) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP32664MF_00297192, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297192) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297192, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1202), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP32664MF_00297192, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297192) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297192, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1202), '}'), '')))), '[^-]', ''))) AS ?step2203) . BIND(((?step2203 + ?targetMotifMatchRegionMatchBeginPositionMF_00297193) - 1) AS ?thisPositionOn40) . BIND(?thisPositionOn40 AS ?thisPositionOn41) . BIND(?this AS ?pfs1t204) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfsb37) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn41))) AS ?pfse38) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn40, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_00297a36')) AS ?annotation36) . BIND(?this AS ?pfs35) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch209 faldo:location ?templateMotifSequenceMatchRegionP32664210 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP32664212 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP32664MF_00297205 . ?templateMotifSequenceMatchRegionP32664210 faldo:begin ?templateMotifSequenceMatchBeginP32664211 . ?templateMotifSequenceMatchBeginP32664211 faldo:position ?templateMotifSequenceMatchBeginPositionP32664206 ; faldo:reference isoform:P32664-1 . ?templateMotifSequenceProfileAlignmentOperationP32664212 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . ?targetMotifMatch213 faldo:location ?targetMotifMatchRegionMatch214 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00297216 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP32664MF_00297207 . ?targetMotifMatchRegionMatch214 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00297215 . ?targetMotifMatchRegionMatchBeginMF_00297215 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00297208 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00297216 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP32664MF_00297205, 1, (STRLEN(?templateMotifCigarP32664MF_00297205) - STRLEN(REPLACE(?templateMotifCigarP32664MF_00297205, CONCAT('^(?:-*[^-]){', STR(((159 - ?templateMotifSequenceMatchBeginPositionP32664206) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1217) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP32664MF_00297207, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297207) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297207, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1217), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP32664MF_00297207, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297207) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297207, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1217), '}'), '')))), '[^-]', ''))) AS ?step2218) . BIND(((?step2218 + ?targetMotifMatchRegionMatchBeginPositionMF_00297208) - 1) AS ?thisPositionOn46) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP32664MF_00297205, 1, (STRLEN(?templateMotifCigarP32664MF_00297205) - STRLEN(REPLACE(?templateMotifCigarP32664MF_00297205, CONCAT('^(?:-*[^-]){', STR(((180 - ?templateMotifSequenceMatchBeginPositionP32664206) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1219) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP32664MF_00297207, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297207) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297207, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1219), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP32664MF_00297207, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297207) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297207, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1219), '}'), '')))), '[^-]', ''))) AS ?step2220) . BIND(((?step2220 + ?targetMotifMatchRegionMatchBeginPositionMF_00297208) - 1) AS ?thisPositionOn47) . BIND(?this AS ?pfs2t221) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn46))) AS ?pfsb44) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn47))) AS ?pfse45) . FILTER ((BOUND(?thisPositionOn46) && BOUND(?thisPositionOn47))) . BIND(URI(CONCAT(STR(?this), '#MF_00297a43')) AS ?annotation43) . BIND(?this AS ?pfs42) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch226 faldo:location ?templateMotifSequenceMatchRegionP32664227 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP32664229 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP32664MF_00297222 . ?templateMotifSequenceMatchRegionP32664227 faldo:begin ?templateMotifSequenceMatchBeginP32664228 . ?templateMotifSequenceMatchBeginP32664228 faldo:position ?templateMotifSequenceMatchBeginPositionP32664223 ; faldo:reference isoform:P32664-1 . ?templateMotifSequenceProfileAlignmentOperationP32664229 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . ?targetMotifMatch230 faldo:location ?targetMotifMatchRegionMatch231 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00297233 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP32664MF_00297224 . ?targetMotifMatchRegionMatch231 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00297232 . ?targetMotifMatchRegionMatchBeginMF_00297232 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00297225 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00297233 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP32664MF_00297222, 1, (STRLEN(?templateMotifCigarP32664MF_00297222) - STRLEN(REPLACE(?templateMotifCigarP32664MF_00297222, CONCAT('^(?:-*[^-]){', STR(((192 - ?templateMotifSequenceMatchBeginPositionP32664223) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1234) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP32664MF_00297224, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297224) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297224, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1234), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP32664MF_00297224, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297224) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297224, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1234), '}'), '')))), '[^-]', ''))) AS ?step2235) . BIND(((?step2235 + ?targetMotifMatchRegionMatchBeginPositionMF_00297225) - 1) AS ?thisPositionOn54) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP32664MF_00297222, 1, (STRLEN(?templateMotifCigarP32664MF_00297222) - STRLEN(REPLACE(?templateMotifCigarP32664MF_00297222, CONCAT('^(?:-*[^-]){', STR(((199 - ?templateMotifSequenceMatchBeginPositionP32664223) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1236) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP32664MF_00297224, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297224) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297224, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1236), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP32664MF_00297224, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297224) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297224, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1236), '}'), '')))), '[^-]', ''))) AS ?step2237) . BIND(((?step2237 + ?targetMotifMatchRegionMatchBeginPositionMF_00297225) - 1) AS ?thisPositionOn55) . BIND(?this AS ?pfs2t238) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn54))) AS ?pfsb50) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn55))) AS ?pfse51) . FILTER (REGEX('Q[ARNDCQEGHILKMFPSTWYVBZJUOX]W[PA]FP[ARNDCQEGHILKMFPSTWYVBZJUOX][SN]', SUBSTR(?thisSequenceValue, ?thisPositionOn54, (?thisPositionOn55 - ?thisPositionOn54)))) . BIND(URI(CONCAT(STR(?this), '#MF_00297a49')) AS ?annotation49) . BIND(?this AS ?pfs48) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch243 faldo:location ?templateMotifSequenceMatchRegionP32664244 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP32664246 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP32664MF_00297239 . ?templateMotifSequenceMatchRegionP32664244 faldo:begin ?templateMotifSequenceMatchBeginP32664245 . ?templateMotifSequenceMatchBeginP32664245 faldo:position ?templateMotifSequenceMatchBeginPositionP32664240 ; faldo:reference isoform:P32664-1 . ?templateMotifSequenceProfileAlignmentOperationP32664246 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . ?targetMotifMatch247 faldo:location ?targetMotifMatchRegionMatch248 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00297250 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP32664MF_00297241 . ?targetMotifMatchRegionMatch248 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00297249 . ?targetMotifMatchRegionMatchBeginMF_00297249 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00297242 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00297250 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP32664MF_00297239, 1, (STRLEN(?templateMotifCigarP32664MF_00297239) - STRLEN(REPLACE(?templateMotifCigarP32664MF_00297239, CONCAT('^(?:-*[^-]){', STR(((158 - ?templateMotifSequenceMatchBeginPositionP32664240) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1251) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP32664MF_00297241, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297241) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297241, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1251), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP32664MF_00297241, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297241) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297241, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1251), '}'), '')))), '[^-]', ''))) AS ?step2252) . BIND(((?step2252 + ?targetMotifMatchRegionMatchBeginPositionMF_00297242) - 1) AS ?thisPositionOn61) . BIND(?thisPositionOn61 AS ?thisPositionOn62) . BIND(?this AS ?pfs2t253) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn61))) AS ?pfsb58) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn62))) AS ?pfse59) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn61, 1) = 'A')) . BIND(URI(CONCAT(STR(?this), '#MF_00297a57')) AS ?annotation57) . BIND(?this AS ?pfs56) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch258 faldo:location ?templateMotifSequenceMatchRegionP32664259 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP32664261 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP32664MF_00297254 . ?templateMotifSequenceMatchRegionP32664259 faldo:begin ?templateMotifSequenceMatchBeginP32664260 . ?templateMotifSequenceMatchBeginP32664260 faldo:position ?templateMotifSequenceMatchBeginPositionP32664255 ; faldo:reference isoform:P32664-1 . ?templateMotifSequenceProfileAlignmentOperationP32664261 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . ?targetMotifMatch262 faldo:location ?targetMotifMatchRegionMatch263 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00297265 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP32664MF_00297256 . ?targetMotifMatchRegionMatch263 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00297264 . ?targetMotifMatchRegionMatchBeginMF_00297264 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00297257 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00297265 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP32664MF_00297254, 1, (STRLEN(?templateMotifCigarP32664MF_00297254) - STRLEN(REPLACE(?templateMotifCigarP32664MF_00297254, CONCAT('^(?:-*[^-]){', STR(((174 - ?templateMotifSequenceMatchBeginPositionP32664255) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1266) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP32664MF_00297256, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297256) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297256, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1266), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP32664MF_00297256, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297256) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297256, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1266), '}'), '')))), '[^-]', ''))) AS ?step2267) . BIND(((?step2267 + ?targetMotifMatchRegionMatchBeginPositionMF_00297257) - 1) AS ?thisPositionOn68) . BIND(?thisPositionOn68 AS ?thisPositionOn69) . BIND(?this AS ?pfs2t268) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn68))) AS ?pfsb65) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn69))) AS ?pfse66) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn68, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_00297a64')) AS ?annotation64) . BIND(?this AS ?pfs63) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch273 faldo:location ?templateMotifSequenceMatchRegionP32664274 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP32664276 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP32664MF_00297269 . ?templateMotifSequenceMatchRegionP32664274 faldo:begin ?templateMotifSequenceMatchBeginP32664275 . ?templateMotifSequenceMatchBeginP32664275 faldo:position ?templateMotifSequenceMatchBeginPositionP32664270 ; faldo:reference isoform:P32664-1 . ?templateMotifSequenceProfileAlignmentOperationP32664276 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . ?targetMotifMatch277 faldo:location ?targetMotifMatchRegionMatch278 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00297280 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP32664MF_00297271 . ?targetMotifMatchRegionMatch278 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00297279 . ?targetMotifMatchRegionMatchBeginMF_00297279 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00297272 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00297280 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP32664MF_00297269, 1, (STRLEN(?templateMotifCigarP32664MF_00297269) - STRLEN(REPLACE(?templateMotifCigarP32664MF_00297269, CONCAT('^(?:-*[^-]){', STR(((174 - ?templateMotifSequenceMatchBeginPositionP32664270) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1281) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP32664MF_00297271, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297271) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297271, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1281), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP32664MF_00297271, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297271) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297271, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1281), '}'), '')))), '[^-]', ''))) AS ?step2282) . BIND(((?step2282 + ?targetMotifMatchRegionMatchBeginPositionMF_00297272) - 1) AS ?thisPositionOn75) . BIND(?thisPositionOn75 AS ?thisPositionOn76) . BIND(?this AS ?pfs2t283) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn75))) AS ?pfsb72) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn76))) AS ?pfse73) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn75, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_00297a71')) AS ?annotation71) . BIND(?this AS ?pfs70) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch288 faldo:location ?templateMotifSequenceMatchRegionP32664289 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP32664291 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP32664MF_00297284 . ?templateMotifSequenceMatchRegionP32664289 faldo:begin ?templateMotifSequenceMatchBeginP32664290 . ?templateMotifSequenceMatchBeginP32664290 faldo:position ?templateMotifSequenceMatchBeginPositionP32664285 ; faldo:reference isoform:P32664-1 . ?templateMotifSequenceProfileAlignmentOperationP32664291 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . ?targetMotifMatch292 faldo:location ?targetMotifMatchRegionMatch293 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00297295 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP32664MF_00297286 . ?targetMotifMatchRegionMatch293 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00297294 . ?targetMotifMatchRegionMatchBeginMF_00297294 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00297287 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00297295 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP32664MF_00297284, 1, (STRLEN(?templateMotifCigarP32664MF_00297284) - STRLEN(REPLACE(?templateMotifCigarP32664MF_00297284, CONCAT('^(?:-*[^-]){', STR(((178 - ?templateMotifSequenceMatchBeginPositionP32664285) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1296) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP32664MF_00297286, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297286) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297286, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1296), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP32664MF_00297286, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297286) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297286, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1296), '}'), '')))), '[^-]', ''))) AS ?step2297) . BIND(((?step2297 + ?targetMotifMatchRegionMatchBeginPositionMF_00297287) - 1) AS ?thisPositionOn82) . BIND(?thisPositionOn82 AS ?thisPositionOn83) . BIND(?this AS ?pfs2t298) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn82))) AS ?pfsb79) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn83))) AS ?pfse80) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn82, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_00297a78')) AS ?annotation78) . BIND(?this AS ?pfs77) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch303 faldo:location ?templateMotifSequenceMatchRegionP32664304 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP32664306 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP32664MF_00297299 . ?templateMotifSequenceMatchRegionP32664304 faldo:begin ?templateMotifSequenceMatchBeginP32664305 . ?templateMotifSequenceMatchBeginP32664305 faldo:position ?templateMotifSequenceMatchBeginPositionP32664300 ; faldo:reference isoform:P32664-1 . ?templateMotifSequenceProfileAlignmentOperationP32664306 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . ?targetMotifMatch307 faldo:location ?targetMotifMatchRegionMatch308 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00297310 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP32664MF_00297301 . ?targetMotifMatchRegionMatch308 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00297309 . ?targetMotifMatchRegionMatchBeginMF_00297309 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00297302 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00297310 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP32664MF_00297299, 1, (STRLEN(?templateMotifCigarP32664MF_00297299) - STRLEN(REPLACE(?templateMotifCigarP32664MF_00297299, CONCAT('^(?:-*[^-]){', STR(((178 - ?templateMotifSequenceMatchBeginPositionP32664300) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1311) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP32664MF_00297301, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297301) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297301, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1311), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP32664MF_00297301, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297301) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297301, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1311), '}'), '')))), '[^-]', ''))) AS ?step2312) . BIND(((?step2312 + ?targetMotifMatchRegionMatchBeginPositionMF_00297302) - 1) AS ?thisPositionOn89) . BIND(?thisPositionOn89 AS ?thisPositionOn90) . BIND(?this AS ?pfs2t313) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn89))) AS ?pfsb86) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn90))) AS ?pfse87) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn89, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_00297a85')) AS ?annotation85) . BIND(?this AS ?pfs84) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch318 faldo:location ?templateMotifSequenceMatchRegionP32664319 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP32664321 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP32664MF_00297314 . ?templateMotifSequenceMatchRegionP32664319 faldo:begin ?templateMotifSequenceMatchBeginP32664320 . ?templateMotifSequenceMatchBeginP32664320 faldo:position ?templateMotifSequenceMatchBeginPositionP32664315 ; faldo:reference isoform:P32664-1 . ?templateMotifSequenceProfileAlignmentOperationP32664321 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . ?targetMotifMatch322 faldo:location ?targetMotifMatchRegionMatch323 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00297325 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP32664MF_00297316 . ?targetMotifMatchRegionMatch323 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00297324 . ?targetMotifMatchRegionMatchBeginMF_00297324 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00297317 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00297325 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP32664MF_00297314, 1, (STRLEN(?templateMotifCigarP32664MF_00297314) - STRLEN(REPLACE(?templateMotifCigarP32664MF_00297314, CONCAT('^(?:-*[^-]){', STR(((219 - ?templateMotifSequenceMatchBeginPositionP32664315) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1326) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP32664MF_00297316, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297316) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297316, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1326), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP32664MF_00297316, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297316) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297316, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1326), '}'), '')))), '[^-]', ''))) AS ?step2327) . BIND(((?step2327 + ?targetMotifMatchRegionMatchBeginPositionMF_00297317) - 1) AS ?thisPositionOn96) . BIND(?thisPositionOn96 AS ?thisPositionOn97) . BIND(?this AS ?pfs2t328) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn96))) AS ?pfsb93) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn97))) AS ?pfse94) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn96, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_00297a92')) AS ?annotation92) . BIND(?this AS ?pfs91) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch333 faldo:location ?templateMotifSequenceMatchRegionP32664334 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP32664336 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP32664MF_00297329 . ?templateMotifSequenceMatchRegionP32664334 faldo:begin ?templateMotifSequenceMatchBeginP32664335 . ?templateMotifSequenceMatchBeginP32664335 faldo:position ?templateMotifSequenceMatchBeginPositionP32664330 ; faldo:reference isoform:P32664-1 . ?templateMotifSequenceProfileAlignmentOperationP32664336 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . ?targetMotifMatch337 faldo:location ?targetMotifMatchRegionMatch338 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00297340 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP32664MF_00297331 . ?targetMotifMatchRegionMatch338 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00297339 . ?targetMotifMatchRegionMatchBeginMF_00297339 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00297332 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00297340 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP32664MF_00297329, 1, (STRLEN(?templateMotifCigarP32664MF_00297329) - STRLEN(REPLACE(?templateMotifCigarP32664MF_00297329, CONCAT('^(?:-*[^-]){', STR(((219 - ?templateMotifSequenceMatchBeginPositionP32664330) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1341) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP32664MF_00297331, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297331) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297331, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1341), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP32664MF_00297331, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297331) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297331, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1341), '}'), '')))), '[^-]', ''))) AS ?step2342) . BIND(((?step2342 + ?targetMotifMatchRegionMatchBeginPositionMF_00297332) - 1) AS ?thisPositionOn103) . BIND(?thisPositionOn103 AS ?thisPositionOn104) . BIND(?this AS ?pfs2t343) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn103))) AS ?pfsb100) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn104))) AS ?pfse101) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn103, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_00297a99')) AS ?annotation99) . BIND(?this AS ?pfs98) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch348 faldo:location ?templateMotifSequenceMatchRegionP32664349 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP32664351 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP32664MF_00297344 . ?templateMotifSequenceMatchRegionP32664349 faldo:begin ?templateMotifSequenceMatchBeginP32664350 . ?templateMotifSequenceMatchBeginP32664350 faldo:position ?templateMotifSequenceMatchBeginPositionP32664345 ; faldo:reference isoform:P32664-1 . ?templateMotifSequenceProfileAlignmentOperationP32664351 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . ?targetMotifMatch352 faldo:location ?targetMotifMatchRegionMatch353 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00297355 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP32664MF_00297346 . ?targetMotifMatchRegionMatch353 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00297354 . ?targetMotifMatchRegionMatchBeginMF_00297354 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00297347 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00297355 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP32664MF_00297344, 1, (STRLEN(?templateMotifCigarP32664MF_00297344) - STRLEN(REPLACE(?templateMotifCigarP32664MF_00297344, CONCAT('^(?:-*[^-]){', STR(((25 - ?templateMotifSequenceMatchBeginPositionP32664345) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1356) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP32664MF_00297346, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297346) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297346, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1356), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP32664MF_00297346, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297346) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297346, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1356), '}'), '')))), '[^-]', ''))) AS ?step2357) . BIND(((?step2357 + ?targetMotifMatchRegionMatchBeginPositionMF_00297347) - 1) AS ?thisPositionOn111) . BIND(?thisPositionOn111 AS ?thisPositionOn112) . BIND(?this AS ?pfs2t358) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn111))) AS ?pfsb107) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn112))) AS ?pfse108) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn111, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_00297a106')) AS ?annotation106) . BIND(?this AS ?pfs105) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch363 faldo:location ?templateMotifSequenceMatchRegionP32664364 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP32664366 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP32664MF_00297359 . ?templateMotifSequenceMatchRegionP32664364 faldo:begin ?templateMotifSequenceMatchBeginP32664365 . ?templateMotifSequenceMatchBeginP32664365 faldo:position ?templateMotifSequenceMatchBeginPositionP32664360 ; faldo:reference isoform:P32664-1 . ?templateMotifSequenceProfileAlignmentOperationP32664366 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . ?targetMotifMatch367 faldo:location ?targetMotifMatchRegionMatch368 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00297370 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP32664MF_00297361 . ?targetMotifMatchRegionMatch368 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00297369 . ?targetMotifMatchRegionMatchBeginMF_00297369 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00297362 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00297370 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP32664MF_00297359, 1, (STRLEN(?templateMotifCigarP32664MF_00297359) - STRLEN(REPLACE(?templateMotifCigarP32664MF_00297359, CONCAT('^(?:-*[^-]){', STR(((69 - ?templateMotifSequenceMatchBeginPositionP32664360) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1371) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP32664MF_00297361, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297361) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297361, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1371), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP32664MF_00297361, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297361) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297361, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1371), '}'), '')))), '[^-]', ''))) AS ?step2372) . BIND(((?step2372 + ?targetMotifMatchRegionMatchBeginPositionMF_00297362) - 1) AS ?thisPositionOn119) . BIND(?thisPositionOn119 AS ?thisPositionOn120) . BIND(?this AS ?pfs2t373) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn119))) AS ?pfsb115) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn120))) AS ?pfse116) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn119, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_00297a114')) AS ?annotation114) . BIND(?this AS ?pfs113) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch378 faldo:location ?templateMotifSequenceMatchRegionP32664379 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP32664381 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP32664MF_00297374 . ?templateMotifSequenceMatchRegionP32664379 faldo:begin ?templateMotifSequenceMatchBeginP32664380 . ?templateMotifSequenceMatchBeginP32664380 faldo:position ?templateMotifSequenceMatchBeginPositionP32664375 ; faldo:reference isoform:P32664-1 . ?templateMotifSequenceProfileAlignmentOperationP32664381 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . ?targetMotifMatch382 faldo:location ?targetMotifMatchRegionMatch383 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00297385 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP32664MF_00297376 . ?targetMotifMatchRegionMatch383 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00297384 . ?targetMotifMatchRegionMatchBeginMF_00297384 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00297377 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00297385 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP32664MF_00297374, 1, (STRLEN(?templateMotifCigarP32664MF_00297374) - STRLEN(REPLACE(?templateMotifCigarP32664MF_00297374, CONCAT('^(?:-*[^-]){', STR(((111 - ?templateMotifSequenceMatchBeginPositionP32664375) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1386) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP32664MF_00297376, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297376) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297376, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1386), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP32664MF_00297376, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297376) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297376, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1386), '}'), '')))), '[^-]', ''))) AS ?step2387) . BIND(((?step2387 + ?targetMotifMatchRegionMatchBeginPositionMF_00297377) - 1) AS ?thisPositionOn127) . BIND(?thisPositionOn127 AS ?thisPositionOn128) . BIND(?this AS ?pfs2t388) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn127))) AS ?pfsb123) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn128))) AS ?pfse124) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn127, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_00297a122')) AS ?annotation122) . BIND(?this AS ?pfs121) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch393 faldo:location ?templateMotifSequenceMatchRegionP32664394 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP32664396 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP32664MF_00297389 . ?templateMotifSequenceMatchRegionP32664394 faldo:begin ?templateMotifSequenceMatchBeginP32664395 . ?templateMotifSequenceMatchBeginP32664395 faldo:position ?templateMotifSequenceMatchBeginPositionP32664390 ; faldo:reference isoform:P32664-1 . ?templateMotifSequenceProfileAlignmentOperationP32664396 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . ?targetMotifMatch397 faldo:location ?targetMotifMatchRegionMatch398 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00297400 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP32664MF_00297391 . ?targetMotifMatchRegionMatch398 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00297399 . ?targetMotifMatchRegionMatchBeginMF_00297399 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00297392 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00297400 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP32664MF_00297389, 1, (STRLEN(?templateMotifCigarP32664MF_00297389) - STRLEN(REPLACE(?templateMotifCigarP32664MF_00297389, CONCAT('^(?:-*[^-]){', STR(((124 - ?templateMotifSequenceMatchBeginPositionP32664390) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1401) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP32664MF_00297391, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297391) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297391, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1401), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP32664MF_00297391, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297391) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297391, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1401), '}'), '')))), '[^-]', ''))) AS ?step2402) . BIND(((?step2402 + ?targetMotifMatchRegionMatchBeginPositionMF_00297392) - 1) AS ?thisPositionOn135) . BIND(?thisPositionOn135 AS ?thisPositionOn136) . BIND(?this AS ?pfs2t403) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn135))) AS ?pfsb131) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn136))) AS ?pfse132) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn135, 1) = 'Y')) . BIND(URI(CONCAT(STR(?this), '#MF_00297a130')) AS ?annotation130) . BIND(?this AS ?pfs129) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch408 faldo:location ?templateMotifSequenceMatchRegionP32664409 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP32664411 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP32664MF_00297404 . ?templateMotifSequenceMatchRegionP32664409 faldo:begin ?templateMotifSequenceMatchBeginP32664410 . ?templateMotifSequenceMatchBeginP32664410 faldo:position ?templateMotifSequenceMatchBeginPositionP32664405 ; faldo:reference isoform:P32664-1 . ?templateMotifSequenceProfileAlignmentOperationP32664411 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . ?targetMotifMatch412 faldo:location ?targetMotifMatchRegionMatch413 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00297415 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP32664MF_00297406 . ?targetMotifMatchRegionMatch413 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00297414 . ?targetMotifMatchRegionMatchBeginMF_00297414 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00297407 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00297415 edam:has_input signature:MF_00297 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP32664MF_00297404, 1, (STRLEN(?templateMotifCigarP32664MF_00297404) - STRLEN(REPLACE(?templateMotifCigarP32664MF_00297404, CONCAT('^(?:-*[^-]){', STR(((241 - ?templateMotifSequenceMatchBeginPositionP32664405) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1416) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP32664MF_00297406, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297406) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297406, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1416), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP32664MF_00297406, 1, (STRLEN(?targetMotifMatchCigarP32664MF_00297406) - STRLEN(REPLACE(?targetMotifMatchCigarP32664MF_00297406, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1416), '}'), '')))), '[^-]', ''))) AS ?step2417) . BIND(((?step2417 + ?targetMotifMatchRegionMatchBeginPositionMF_00297407) - 1) AS ?thisPositionOn143) . BIND(?thisPositionOn143 AS ?thisPositionOn144) . BIND(?this AS ?pfs2t418) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn143))) AS ?pfsb139) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn144))) AS ?pfse140) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn143, 1) = 'A')) . BIND(URI(CONCAT(STR(?this), '#MF_00297a138')) AS ?annotation138) . BIND(?this AS ?pfs137) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag419) . } BIND(IF(BOUND(?tagzinc), ?caseWithTag419, ?UNBOUND_VARIABLE) AS ?case13) . }