CONSTRUCT { _:193413 up:source unirule:MF_00482 . _:193414 up:source unirule:MF_00482 . _:193415 up:source unirule:MF_00482 . _:193416 up:source unirule:MF_00482 . _:193417 up:source unirule:MF_00482 . _:193418 up:source unirule:MF_00482 . _:193419 up:source unirule:MF_00482 . _:193420 up:source unirule:MF_00482 . _:193421 up:source unirule:MF_00482 . _:193422 up:source unirule:MF_00482 . _:193423 up:source unirule:MF_00482 . _:193424 up:source unirule:MF_00482 . _:193425 up:source unirule:MF_00482 . _:193426 up:source unirule:MF_00482 . _:193427 up:source unirule:MF_00482 . _:193428 up:source unirule:MF_00482 . _:193429 up:source unirule:MF_00482 . _:193430 up:source unirule:MF_00482 . _:193431 up:source unirule:MF_00482 . _:193432 up:source unirule:MF_00482 . _:193433 up:source unirule:MF_00482 . _:193434 up:source unirule:MF_00482 . _:193435 up:source unirule:MF_00482 . _:193436 up:source unirule:MF_00482 . _:193437 up:source unirule:MF_00482 . _:193438 up:source unirule:MF_00482 . _:193439 up:source unirule:MF_00482 . _:193440 up:source unirule:MF_00482 . _:193441 up:source unirule:MF_00482 . _:193442 up:source unirule:MF_00482 . _:193443 up:source unirule:MF_00482 . _:193444 up:source unirule:MF_00482 . _:193445 up:source unirule:MF_00482 . _:193446 up:source unirule:MF_00482 . _:193447 up:source unirule:MF_00482 . _:193448 up:source unirule:MF_00482 . _:193449 up:source unirule:MF_00482 . _:193450 up:source unirule:MF_00482 . _:193451 up:source unirule:MF_00482 . _:193452 up:source unirule:MF_00482 . _:193453 up:source unirule:MF_00482 . _:193454 up:source unirule:MF_00482 . _:193455 up:source unirule:MF_00482 . _:193456 up:source unirule:MF_00482 . _:193457 up:source unirule:MF_00482 . _:193458 up:source unirule:MF_00482 . _:193459 up:source unirule:MF_00482 . _:193460 up:source unirule:MF_00482 . _:193461 up:source unirule:MF_00482 . _:193462 up:source unirule:MF_00482 . _:193463 up:source unirule:MF_00482 . _:193464 up:source unirule:MF_00482 . ?this up:annotation ?annotation1 , ?annotation3 ; up:classifiedWith GO:0000287 , GO:0009055 , GO:0015979 , keyword:1133 , keyword:148 , keyword:157 , keyword:249 , keyword:408 , keyword:411 , keyword:460 , keyword:472 , keyword:479 , keyword:4 , keyword:560 , keyword:602 , keyword:603 , keyword:812 , keyword:813 . ?gene0 skos:prefLabel 'psaB' . ?annotation1 up:activity ?activity2 ; rdf:type up:Catalytic_Activity_Annotation . ?activity2 up:catalyticActivity <http://rdf.rhea-db.org/30407>; up:enzymeClass <http://purl.uniprot.org/enzyme/1.97.1.12>. ?annotation3 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the PsaA/PsaB family.' . ?case4 up:alternativeName ?name6 , ?name7 ; up:classifiedWith GO:0009535 ; up:recommendedName ?name5 . ?name5 up:ecName '1.97.1.12' ; up:fullName 'Photosystem I P700 chlorophyll a apoprotein A2' ; rdf:type up:Structured_Name . ?name6 up:fullName 'PSI-B' ; rdf:type up:Structured_Name . ?name7 up:fullName 'PsaB' ; rdf:type up:Structured_Name . ?case8 up:alternativeName ?name10 ; up:recommendedName ?name9 . ?name9 up:ecName '1.97.1.12' ; up:fullName 'Photosystem I P700 chlorophyll a apoprotein A2' ; rdf:type up:Structured_Name . ?name10 up:fullName 'PsaB' ; rdf:type up:Structured_Name . ?case11 up:classifiedWith keyword:1003 , keyword:997 . ?case13 up:classifiedWith keyword:793 . ?case15 up:classifiedWith GO:0005886 . ?case17 up:classifiedWith GO:0042651 . ?pfs20 up:annotation ?annotation21 . ?annotation21 faldo:begin ?pfsb22 ; faldo:end ?pfse23 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical; Name=I' . ?pfsb22 faldo:position ?thisPositionOn24 ; rdf:type faldo:ExactPosition . ?pfse23 faldo:position ?thisPositionOn25 ; rdf:type faldo:ExactPosition . ?pfs26 up:annotation ?annotation27 . ?annotation27 faldo:begin ?pfsb28 ; faldo:end ?pfse29 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical; Name=II' . ?pfsb28 faldo:position ?thisPositionOn30 ; rdf:type faldo:ExactPosition . ?pfse29 faldo:position ?thisPositionOn31 ; rdf:type faldo:ExactPosition . ?pfs32 up:annotation ?annotation33 . ?annotation33 faldo:begin ?pfsb34 ; faldo:end ?pfse35 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical; Name=III' . ?pfsb34 faldo:position ?thisPositionOn36 ; rdf:type faldo:ExactPosition . ?pfse35 faldo:position ?thisPositionOn37 ; rdf:type faldo:ExactPosition . ?pfs38 up:annotation ?annotation39 . ?annotation39 faldo:begin ?pfsb40 ; faldo:end ?pfse41 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical; Name=IV' . ?pfsb40 faldo:position ?thisPositionOn42 ; rdf:type faldo:ExactPosition . ?pfse41 faldo:position ?thisPositionOn43 ; rdf:type faldo:ExactPosition . ?pfs44 up:annotation ?annotation45 . ?annotation45 faldo:begin ?pfsb46 ; faldo:end ?pfse47 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical; Name=V' . ?pfsb46 faldo:position ?thisPositionOn48 ; rdf:type faldo:ExactPosition . ?pfse47 faldo:position ?thisPositionOn49 ; rdf:type faldo:ExactPosition . ?pfs50 up:annotation ?annotation51 . ?annotation51 faldo:begin ?pfsb52 ; faldo:end ?pfse53 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical; Name=VI' . ?pfsb52 faldo:position ?thisPositionOn54 ; rdf:type faldo:ExactPosition . ?pfse53 faldo:position ?thisPositionOn55 ; rdf:type faldo:ExactPosition . ?pfs56 up:annotation ?annotation57 . ?annotation57 faldo:begin ?pfsb58 ; faldo:end ?pfse59 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical; Name=VII' . ?pfsb58 faldo:position ?thisPositionOn60 ; rdf:type faldo:ExactPosition . ?pfse59 faldo:position ?thisPositionOn61 ; rdf:type faldo:ExactPosition . ?pfs62 up:annotation ?annotation63 . ?annotation63 faldo:begin ?pfsb64 ; faldo:end ?pfse65 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical; Name=VIII' . ?pfsb64 faldo:position ?thisPositionOn66 ; rdf:type faldo:ExactPosition . ?pfse65 faldo:position ?thisPositionOn67 ; rdf:type faldo:ExactPosition . ?pfs68 up:annotation ?annotation69 . ?annotation69 faldo:begin ?pfsb70 ; faldo:end ?pfse71 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical; Name=IX' . ?pfsb70 faldo:position ?thisPositionOn72 ; rdf:type faldo:ExactPosition . ?pfse71 faldo:position ?thisPositionOn73 ; rdf:type faldo:ExactPosition . ?pfs74 up:annotation ?annotation75 . ?annotation75 faldo:begin ?pfsb76 ; faldo:end ?pfse77 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical; Name=X' . ?pfsb76 faldo:position ?thisPositionOn78 ; rdf:type faldo:ExactPosition . ?pfse77 faldo:position ?thisPositionOn79 ; rdf:type faldo:ExactPosition . ?pfs80 up:annotation ?annotation81 . ?annotation81 faldo:begin ?pfsb82 ; faldo:end ?pfse83 ; rdf:type up:Transmembrane_Annotation ; rdfs:comment 'Helical; Name=XI' . ?pfsb82 faldo:position ?thisPositionOn84 ; rdf:type faldo:ExactPosition . ?pfse83 faldo:position ?thisPositionOn85 ; rdf:type faldo:ExactPosition . ?pfs86 up:annotation ?annotation87 . ?annotation87 faldo:begin ?pfsb88 ; faldo:end ?pfse89 ; up:ligand ?ligand90 ; rdf:type up:Binding_Site_Annotation . ?pfsb88 faldo:position ?thisPositionOn91 ; rdf:type faldo:ExactPosition . ?pfse89 faldo:position ?thisPositionOn92 ; rdf:type faldo:ExactPosition . ?ligand90 rdfs:subClassOf chebi:49883 . ?pfs93 up:annotation ?annotation94 . ?annotation94 faldo:begin ?pfsb95 ; faldo:end ?pfse96 ; up:ligand ?ligand97 ; rdf:type up:Binding_Site_Annotation . ?pfsb95 faldo:position ?thisPositionOn98 ; rdf:type faldo:ExactPosition . ?pfse96 faldo:position ?thisPositionOn99 ; rdf:type faldo:ExactPosition . ?ligand97 rdfs:subClassOf chebi:49883 . ?pfs100 up:annotation ?annotation101 . ?annotation101 faldo:begin ?pfsb102 ; faldo:end ?pfse103 ; up:ligand ?ligand104 ; rdf:type up:Binding_Site_Annotation . ?pfsb102 faldo:position ?thisPositionOn105 ; rdf:type faldo:ExactPosition . ?pfse103 faldo:position ?thisPositionOn106 ; rdf:type faldo:ExactPosition . ?ligand104 rdfs:subClassOf chebi:18067 . ?pfs107 up:annotation ?annotation108 . ?annotation108 faldo:begin ?pfsb109 ; faldo:end ?pfse110 ; up:ligand ?ligand111 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'axial binding residue' . ?pfsb109 faldo:position ?thisPositionOn112 ; rdf:type faldo:ExactPosition . ?pfse110 faldo:position ?thisPositionOn113 ; rdf:type faldo:ExactPosition . ?ligand111 up:ligandPart ?ligand111 ; rdfs:subClassOf chebi:25107 , chebi:58416 . ?pfs114 up:annotation ?annotation115 . ?annotation115 faldo:begin ?pfsb116 ; faldo:end ?pfse117 ; up:ligand ?ligand118 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'axial binding residue' . ?pfsb116 faldo:position ?thisPositionOn119 ; rdf:type faldo:ExactPosition . ?pfse117 faldo:position ?thisPositionOn120 ; rdf:type faldo:ExactPosition . ?ligand118 up:ligandPart ?ligand118 ; rdfs:subClassOf chebi:25107 , chebi:58416 . ?pfs121 up:annotation ?annotation122 . ?annotation122 faldo:begin ?pfsb123 ; faldo:end ?pfse124 ; up:ligand ?ligand125 ; rdf:type up:Binding_Site_Annotation . ?pfsb123 faldo:position ?thisPositionOn126 ; rdf:type faldo:ExactPosition . ?pfse124 faldo:position ?thisPositionOn127 ; rdf:type faldo:ExactPosition . ?ligand125 rdfs:subClassOf chebi:58416 . ?pfs128 up:annotation ?annotation129 . ?annotation129 faldo:begin ?pfsb130 ; faldo:end ?pfse131 ; up:ligand ?ligand132 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'axial binding residue' . ?pfsb130 faldo:position ?thisPositionOn133 ; rdf:type faldo:ExactPosition . ?pfse131 faldo:position ?thisPositionOn134 ; rdf:type faldo:ExactPosition . ?ligand132 up:ligandPart ?ligand132 ; rdfs:subClassOf chebi:25107 , chebi:73095 . ?pfs135 up:annotation ?annotation136 . ?annotation136 faldo:begin ?pfsb137 ; faldo:end ?pfse138 ; up:ligand ?ligand139 ; rdf:type up:Binding_Site_Annotation ; rdfs:comment 'axial binding residue' . ?pfsb137 faldo:position ?thisPositionOn140 ; rdf:type faldo:ExactPosition . ?pfse138 faldo:position ?thisPositionOn141 ; rdf:type faldo:ExactPosition . ?ligand139 up:ligandPart ?ligand139 ; rdfs:subClassOf chebi:25107 , chebi:73095 . ?pfs142 up:annotation ?annotation143 . ?annotation143 faldo:begin ?pfsb144 ; faldo:end ?pfse145 ; up:ligand ?ligand146 ; rdf:type up:Binding_Site_Annotation . ?pfsb144 faldo:position ?thisPositionOn147 ; rdf:type faldo:ExactPosition . ?pfse145 faldo:position ?thisPositionOn148 ; rdf:type faldo:ExactPosition . ?ligand146 rdfs:subClassOf chebi:73095 . _:193465 a rdf:Statement ; up:attribution _:193413 ; rdf:subject ?gene0 ; rdf:predicate up:encodedBy ; rdf:object ?gene0 . _:193466 a rdf:Statement ; up:attribution _:193414 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation1 . _:193467 a rdf:Statement ; up:attribution _:193415 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:193468 a rdf:Statement ; up:attribution _:193416 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:813 . _:193469 a rdf:Statement ; up:attribution _:193417 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:249 . _:193470 a rdf:Statement ; up:attribution _:193418 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:602 . _:193471 a rdf:Statement ; up:attribution _:193419 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:603 . _:193472 a rdf:Statement ; up:attribution _:193420 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:157 . _:193473 a rdf:Statement ; up:attribution _:193421 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:148 . _:193474 a rdf:Statement ; up:attribution _:193422 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:193475 a rdf:Statement ; up:attribution _:193423 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:408 . _:193476 a rdf:Statement ; up:attribution _:193424 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:560 . _:193477 a rdf:Statement ; up:attribution _:193425 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:460 . _:193478 a rdf:Statement ; up:attribution _:193426 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:411 . _:193479 a rdf:Statement ; up:attribution _:193427 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:4 . _:193480 a rdf:Statement ; up:attribution _:193428 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:472 . _:193481 a rdf:Statement ; up:attribution _:193429 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:812 . _:193482 a rdf:Statement ; up:attribution _:193430 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1133 . _:193483 a rdf:Statement ; up:attribution _:193431 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0009055 . _:193484 a rdf:Statement ; up:attribution _:193432 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0000287 . _:193485 a rdf:Statement ; up:attribution _:193433 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0015979 . _:193486 a rdf:Statement ; up:attribution _:193434 ; rdf:subject ?case4 ; rdf:predicate up:recommendedName ; rdf:object ?name5 . _:193487 a rdf:Statement ; up:attribution _:193435 ; rdf:subject ?case4 ; rdf:predicate up:alternativeName ; rdf:object ?name6 . _:193488 a rdf:Statement ; up:attribution _:193436 ; rdf:subject ?case4 ; rdf:predicate up:alternativeName ; rdf:object ?name7 . _:193489 a rdf:Statement ; up:attribution _:193437 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object GO:0009535 . _:193490 a rdf:Statement ; up:attribution _:193438 ; rdf:subject ?case8 ; rdf:predicate up:recommendedName ; rdf:object ?name9 . _:193491 a rdf:Statement ; up:attribution _:193439 ; rdf:subject ?case8 ; rdf:predicate up:alternativeName ; rdf:object ?name10 . _:193492 a rdf:Statement ; up:attribution _:193440 ; rdf:subject ?case11 ; rdf:predicate up:classifiedWith ; rdf:object keyword:1003 . _:193493 a rdf:Statement ; up:attribution _:193441 ; rdf:subject ?case11 ; rdf:predicate up:classifiedWith ; rdf:object keyword:997 . _:193494 a rdf:Statement ; up:attribution _:193442 ; rdf:subject ?case13 ; rdf:predicate up:classifiedWith ; rdf:object keyword:793 . _:193495 a rdf:Statement ; up:attribution _:193443 ; rdf:subject ?case15 ; rdf:predicate up:classifiedWith ; rdf:object GO:0005886 . _:193496 a rdf:Statement ; up:attribution _:193444 ; rdf:subject ?case17 ; rdf:predicate up:classifiedWith ; rdf:object GO:0042651 . _:193497 a rdf:Statement ; up:source unirule:MF_00482 ; rdf:subject ?pfs20 ; rdf:predicate up:annotation ; rdf:object ?annotation21 . _:193498 a rdf:Statement ; up:attribution _:193445 ; rdf:subject ?pfs20 ; rdf:predicate up:annotation ; rdf:object ?annotation21 . _:193499 a rdf:Statement ; up:source unirule:MF_00482 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation27 . _:193500 a rdf:Statement ; up:attribution _:193446 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation27 . _:193501 a rdf:Statement ; up:source unirule:MF_00482 ; rdf:subject ?pfs32 ; rdf:predicate up:annotation ; rdf:object ?annotation33 . _:193502 a rdf:Statement ; up:attribution _:193447 ; rdf:subject ?pfs32 ; rdf:predicate up:annotation ; rdf:object ?annotation33 . _:193503 a rdf:Statement ; up:source unirule:MF_00482 ; rdf:subject ?pfs38 ; rdf:predicate up:annotation ; rdf:object ?annotation39 . _:193504 a rdf:Statement ; up:attribution _:193448 ; rdf:subject ?pfs38 ; rdf:predicate up:annotation ; rdf:object ?annotation39 . _:193505 a rdf:Statement ; up:source unirule:MF_00482 ; rdf:subject ?pfs44 ; rdf:predicate up:annotation ; rdf:object ?annotation45 . _:193506 a rdf:Statement ; up:attribution _:193449 ; rdf:subject ?pfs44 ; rdf:predicate up:annotation ; rdf:object ?annotation45 . _:193507 a rdf:Statement ; up:source unirule:MF_00482 ; rdf:subject ?pfs50 ; rdf:predicate up:annotation ; rdf:object ?annotation51 . _:193508 a rdf:Statement ; up:attribution _:193450 ; rdf:subject ?pfs50 ; rdf:predicate up:annotation ; rdf:object ?annotation51 . _:193509 a rdf:Statement ; up:source unirule:MF_00482 ; rdf:subject ?pfs56 ; rdf:predicate up:annotation ; rdf:object ?annotation57 . _:193510 a rdf:Statement ; up:attribution _:193451 ; rdf:subject ?pfs56 ; rdf:predicate up:annotation ; rdf:object ?annotation57 . _:193511 a rdf:Statement ; up:source unirule:MF_00482 ; rdf:subject ?pfs62 ; rdf:predicate up:annotation ; rdf:object ?annotation63 . _:193512 a rdf:Statement ; up:attribution _:193452 ; rdf:subject ?pfs62 ; rdf:predicate up:annotation ; rdf:object ?annotation63 . _:193513 a rdf:Statement ; up:source unirule:MF_00482 ; rdf:subject ?pfs68 ; rdf:predicate up:annotation ; rdf:object ?annotation69 . _:193514 a rdf:Statement ; up:attribution _:193453 ; rdf:subject ?pfs68 ; rdf:predicate up:annotation ; rdf:object ?annotation69 . _:193515 a rdf:Statement ; up:source unirule:MF_00482 ; rdf:subject ?pfs74 ; rdf:predicate up:annotation ; rdf:object ?annotation75 . _:193516 a rdf:Statement ; up:attribution _:193454 ; rdf:subject ?pfs74 ; rdf:predicate up:annotation ; rdf:object ?annotation75 . _:193517 a rdf:Statement ; up:source unirule:MF_00482 ; rdf:subject ?pfs80 ; rdf:predicate up:annotation ; rdf:object ?annotation81 . _:193518 a rdf:Statement ; up:attribution _:193455 ; rdf:subject ?pfs80 ; rdf:predicate up:annotation ; rdf:object ?annotation81 . _:193519 a rdf:Statement ; up:source unirule:MF_00482 ; rdf:subject ?pfs86 ; rdf:predicate up:annotation ; rdf:object ?annotation87 . _:193520 a rdf:Statement ; up:attribution _:193456 ; rdf:subject ?pfs86 ; rdf:predicate up:annotation ; rdf:object ?annotation87 . _:193521 a rdf:Statement ; up:source unirule:MF_00482 ; rdf:subject ?pfs93 ; rdf:predicate up:annotation ; rdf:object ?annotation94 . _:193522 a rdf:Statement ; up:attribution _:193457 ; rdf:subject ?pfs93 ; rdf:predicate up:annotation ; rdf:object ?annotation94 . _:193523 a rdf:Statement ; up:source unirule:MF_00482 ; rdf:subject ?pfs100 ; rdf:predicate up:annotation ; rdf:object ?annotation101 . _:193524 a rdf:Statement ; up:attribution _:193458 ; rdf:subject ?pfs100 ; rdf:predicate up:annotation ; rdf:object ?annotation101 . _:193525 a rdf:Statement ; up:source unirule:MF_00482 ; rdf:subject ?pfs107 ; rdf:predicate up:annotation ; rdf:object ?annotation108 . _:193526 a rdf:Statement ; up:attribution _:193459 ; rdf:subject ?pfs107 ; rdf:predicate up:annotation ; rdf:object ?annotation108 . _:193527 a rdf:Statement ; up:source unirule:MF_00482 ; rdf:subject ?pfs114 ; rdf:predicate up:annotation ; rdf:object ?annotation115 . _:193528 a rdf:Statement ; up:attribution _:193460 ; rdf:subject ?pfs114 ; rdf:predicate up:annotation ; rdf:object ?annotation115 . _:193529 a rdf:Statement ; up:source unirule:MF_00482 ; rdf:subject ?pfs121 ; rdf:predicate up:annotation ; rdf:object ?annotation122 . _:193530 a rdf:Statement ; up:attribution _:193461 ; rdf:subject ?pfs121 ; rdf:predicate up:annotation ; rdf:object ?annotation122 . _:193531 a rdf:Statement ; up:source unirule:MF_00482 ; rdf:subject ?pfs128 ; rdf:predicate up:annotation ; rdf:object ?annotation129 . _:193532 a rdf:Statement ; up:attribution _:193462 ; rdf:subject ?pfs128 ; rdf:predicate up:annotation ; rdf:object ?annotation129 . _:193533 a rdf:Statement ; up:source unirule:MF_00482 ; rdf:subject ?pfs135 ; rdf:predicate up:annotation ; rdf:object ?annotation136 . _:193534 a rdf:Statement ; up:attribution _:193463 ; rdf:subject ?pfs135 ; rdf:predicate up:annotation ; rdf:object ?annotation136 . _:193535 a rdf:Statement ; up:source unirule:MF_00482 ; rdf:subject ?pfs142 ; rdf:predicate up:annotation ; rdf:object ?annotation143 . _:193536 a rdf:Statement ; up:attribution _:193464 ; rdf:subject ?pfs142 ; rdf:predicate up:annotation ; rdf:object ?annotation143 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00482 #Rule MF_00482 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2024-09-03 { ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00482 . ?thisOrganism rdfs:subClassOf+ taxon:1117 . } UNION { ?this rdfs:seeAlso signature:MF_00482 . { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } UNION { ?this up:encodedIn up:Cyanelle . } UNION { ?this up:encodedIn up:Apicoplast . } UNION { ?this up:encodedIn up:Organellar_chromatophore . } UNION { ?this up:encodedIn up:Non-photosynthetic_plastid . } } BIND(URI(CONCAT(STR(?this), '#MF_00482a1')) AS ?annotation1) . BIND(URI(CONCAT(STR(?this), '#MF_00482a3')) AS ?annotation3) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch153 faldo:location ?templateMotifSequenceMatchRegionP0A407154 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A407156 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A407MF_00482149 . ?templateMotifSequenceMatchRegionP0A407154 faldo:begin ?templateMotifSequenceMatchBeginP0A407155 . ?templateMotifSequenceMatchBeginP0A407155 faldo:position ?templateMotifSequenceMatchBeginPositionP0A407150 ; faldo:reference isoform:P0A407-1 . ?templateMotifSequenceProfileAlignmentOperationP0A407156 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . ?targetMotifMatch157 faldo:location ?targetMotifMatchRegionMatch158 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00482160 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A407MF_00482151 . ?targetMotifMatchRegionMatch158 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00482159 . ?targetMotifMatchRegionMatchBeginMF_00482159 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00482152 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00482160 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482149, 1, (STRLEN(?templateMotifCigarP0A407MF_00482149) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482149, CONCAT('^(?:-*[^-]){', STR(((39 - ?templateMotifSequenceMatchBeginPositionP0A407150) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1161) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482151, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482151) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482151, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1161), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482151, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482151) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482151, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1161), '}'), '')))), '[^-]', ''))) AS ?step2162) . BIND(((?step2162 + ?targetMotifMatchRegionMatchBeginPositionMF_00482152) - 1) AS ?thisPositionOn24) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482149, 1, (STRLEN(?templateMotifCigarP0A407MF_00482149) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482149, CONCAT('^(?:-*[^-]){', STR(((70 - ?templateMotifSequenceMatchBeginPositionP0A407150) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1163) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482151, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482151) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482151, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1163), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482151, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482151) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482151, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1163), '}'), '')))), '[^-]', ''))) AS ?step2164) . BIND(((?step2164 + ?targetMotifMatchRegionMatchBeginPositionMF_00482152) - 1) AS ?thisPositionOn25) . BIND(?this AS ?pfs1t165) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfsb22) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfse23) . FILTER ((BOUND(?thisPositionOn24) && BOUND(?thisPositionOn25))) . BIND(URI(CONCAT(STR(?this), '#MF_00482a21')) AS ?annotation21) . BIND(?this AS ?pfs20) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch170 faldo:location ?templateMotifSequenceMatchRegionP0A407171 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A407173 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A407MF_00482166 . ?templateMotifSequenceMatchRegionP0A407171 faldo:begin ?templateMotifSequenceMatchBeginP0A407172 . ?templateMotifSequenceMatchBeginP0A407172 faldo:position ?templateMotifSequenceMatchBeginPositionP0A407167 ; faldo:reference isoform:P0A407-1 . ?templateMotifSequenceProfileAlignmentOperationP0A407173 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . ?targetMotifMatch174 faldo:location ?targetMotifMatchRegionMatch175 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00482177 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A407MF_00482168 . ?targetMotifMatchRegionMatch175 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00482176 . ?targetMotifMatchRegionMatchBeginMF_00482176 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00482169 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00482177 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482166, 1, (STRLEN(?templateMotifCigarP0A407MF_00482166) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482166, CONCAT('^(?:-*[^-]){', STR(((132 - ?templateMotifSequenceMatchBeginPositionP0A407167) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1178) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482168, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482168) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482168, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1178), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482168, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482168) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482168, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1178), '}'), '')))), '[^-]', ''))) AS ?step2179) . BIND(((?step2179 + ?targetMotifMatchRegionMatchBeginPositionMF_00482169) - 1) AS ?thisPositionOn30) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482166, 1, (STRLEN(?templateMotifCigarP0A407MF_00482166) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482166, CONCAT('^(?:-*[^-]){', STR(((156 - ?templateMotifSequenceMatchBeginPositionP0A407167) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1180) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482168, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482168) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482168, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1180), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482168, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482168) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482168, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1180), '}'), '')))), '[^-]', ''))) AS ?step2181) . BIND(((?step2181 + ?targetMotifMatchRegionMatchBeginPositionMF_00482169) - 1) AS ?thisPositionOn31) . BIND(?this AS ?pfs1t182) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn30))) AS ?pfsb28) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn31))) AS ?pfse29) . FILTER ((BOUND(?thisPositionOn30) && BOUND(?thisPositionOn31))) . BIND(URI(CONCAT(STR(?this), '#MF_00482a27')) AS ?annotation27) . BIND(?this AS ?pfs26) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch187 faldo:location ?templateMotifSequenceMatchRegionP0A407188 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A407190 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A407MF_00482183 . ?templateMotifSequenceMatchRegionP0A407188 faldo:begin ?templateMotifSequenceMatchBeginP0A407189 . ?templateMotifSequenceMatchBeginP0A407189 faldo:position ?templateMotifSequenceMatchBeginPositionP0A407184 ; faldo:reference isoform:P0A407-1 . ?templateMotifSequenceProfileAlignmentOperationP0A407190 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . ?targetMotifMatch191 faldo:location ?targetMotifMatchRegionMatch192 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00482194 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A407MF_00482185 . ?targetMotifMatchRegionMatch192 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00482193 . ?targetMotifMatchRegionMatchBeginMF_00482193 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00482186 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00482194 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482183, 1, (STRLEN(?templateMotifCigarP0A407MF_00482183) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482183, CONCAT('^(?:-*[^-]){', STR(((173 - ?templateMotifSequenceMatchBeginPositionP0A407184) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1195) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482185, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482185) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482185, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1195), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482185, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482185) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482185, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1195), '}'), '')))), '[^-]', ''))) AS ?step2196) . BIND(((?step2196 + ?targetMotifMatchRegionMatchBeginPositionMF_00482186) - 1) AS ?thisPositionOn36) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482183, 1, (STRLEN(?templateMotifCigarP0A407MF_00482183) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482183, CONCAT('^(?:-*[^-]){', STR(((195 - ?templateMotifSequenceMatchBeginPositionP0A407184) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1197) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482185, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482185) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482185, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1197), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482185, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482185) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482185, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1197), '}'), '')))), '[^-]', ''))) AS ?step2198) . BIND(((?step2198 + ?targetMotifMatchRegionMatchBeginPositionMF_00482186) - 1) AS ?thisPositionOn37) . BIND(?this AS ?pfs1t199) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn36))) AS ?pfsb34) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn37))) AS ?pfse35) . FILTER ((BOUND(?thisPositionOn36) && BOUND(?thisPositionOn37))) . BIND(URI(CONCAT(STR(?this), '#MF_00482a33')) AS ?annotation33) . BIND(?this AS ?pfs32) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch204 faldo:location ?templateMotifSequenceMatchRegionP0A407205 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A407207 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A407MF_00482200 . ?templateMotifSequenceMatchRegionP0A407205 faldo:begin ?templateMotifSequenceMatchBeginP0A407206 . ?templateMotifSequenceMatchBeginP0A407206 faldo:position ?templateMotifSequenceMatchBeginPositionP0A407201 ; faldo:reference isoform:P0A407-1 . ?templateMotifSequenceProfileAlignmentOperationP0A407207 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . ?targetMotifMatch208 faldo:location ?targetMotifMatchRegionMatch209 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00482211 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A407MF_00482202 . ?targetMotifMatchRegionMatch209 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00482210 . ?targetMotifMatchRegionMatchBeginMF_00482210 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00482203 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00482211 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482200, 1, (STRLEN(?templateMotifCigarP0A407MF_00482200) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482200, CONCAT('^(?:-*[^-]){', STR(((270 - ?templateMotifSequenceMatchBeginPositionP0A407201) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1212) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482202, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482202) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1212), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482202, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482202) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1212), '}'), '')))), '[^-]', ''))) AS ?step2213) . BIND(((?step2213 + ?targetMotifMatchRegionMatchBeginPositionMF_00482203) - 1) AS ?thisPositionOn42) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482200, 1, (STRLEN(?templateMotifCigarP0A407MF_00482200) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482200, CONCAT('^(?:-*[^-]){', STR(((287 - ?templateMotifSequenceMatchBeginPositionP0A407201) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1214) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482202, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482202) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1214), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482202, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482202) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1214), '}'), '')))), '[^-]', ''))) AS ?step2215) . BIND(((?step2215 + ?targetMotifMatchRegionMatchBeginPositionMF_00482203) - 1) AS ?thisPositionOn43) . BIND(?this AS ?pfs1t216) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn42))) AS ?pfsb40) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn43))) AS ?pfse41) . FILTER ((BOUND(?thisPositionOn42) && BOUND(?thisPositionOn43))) . BIND(URI(CONCAT(STR(?this), '#MF_00482a39')) AS ?annotation39) . BIND(?this AS ?pfs38) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch221 faldo:location ?templateMotifSequenceMatchRegionP0A407222 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A407224 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A407MF_00482217 . ?templateMotifSequenceMatchRegionP0A407222 faldo:begin ?templateMotifSequenceMatchBeginP0A407223 . ?templateMotifSequenceMatchBeginP0A407223 faldo:position ?templateMotifSequenceMatchBeginPositionP0A407218 ; faldo:reference isoform:P0A407-1 . ?templateMotifSequenceProfileAlignmentOperationP0A407224 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . ?targetMotifMatch225 faldo:location ?targetMotifMatchRegionMatch226 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00482228 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A407MF_00482219 . ?targetMotifMatchRegionMatch226 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00482227 . ?targetMotifMatchRegionMatchBeginMF_00482227 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00482220 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00482228 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482217, 1, (STRLEN(?templateMotifCigarP0A407MF_00482217) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482217, CONCAT('^(?:-*[^-]){', STR(((335 - ?templateMotifSequenceMatchBeginPositionP0A407218) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1229) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482219, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482219) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482219, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1229), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482219, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482219) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482219, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1229), '}'), '')))), '[^-]', ''))) AS ?step2230) . BIND(((?step2230 + ?targetMotifMatchRegionMatchBeginPositionMF_00482220) - 1) AS ?thisPositionOn48) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482217, 1, (STRLEN(?templateMotifCigarP0A407MF_00482217) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482217, CONCAT('^(?:-*[^-]){', STR(((358 - ?templateMotifSequenceMatchBeginPositionP0A407218) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1231) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482219, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482219) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482219, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1231), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482219, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482219) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482219, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1231), '}'), '')))), '[^-]', ''))) AS ?step2232) . BIND(((?step2232 + ?targetMotifMatchRegionMatchBeginPositionMF_00482220) - 1) AS ?thisPositionOn49) . BIND(?this AS ?pfs1t233) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn48))) AS ?pfsb46) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn49))) AS ?pfse47) . FILTER ((BOUND(?thisPositionOn48) && BOUND(?thisPositionOn49))) . BIND(URI(CONCAT(STR(?this), '#MF_00482a45')) AS ?annotation45) . BIND(?this AS ?pfs44) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch238 faldo:location ?templateMotifSequenceMatchRegionP0A407239 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A407241 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A407MF_00482234 . ?templateMotifSequenceMatchRegionP0A407239 faldo:begin ?templateMotifSequenceMatchBeginP0A407240 . ?templateMotifSequenceMatchBeginP0A407240 faldo:position ?templateMotifSequenceMatchBeginPositionP0A407235 ; faldo:reference isoform:P0A407-1 . ?templateMotifSequenceProfileAlignmentOperationP0A407241 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . ?targetMotifMatch242 faldo:location ?targetMotifMatchRegionMatch243 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00482245 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A407MF_00482236 . ?targetMotifMatchRegionMatch243 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00482244 . ?targetMotifMatchRegionMatchBeginMF_00482244 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00482237 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00482245 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482234, 1, (STRLEN(?templateMotifCigarP0A407MF_00482234) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482234, CONCAT('^(?:-*[^-]){', STR(((369 - ?templateMotifSequenceMatchBeginPositionP0A407235) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1246) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482236, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482236) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482236, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1246), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482236, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482236) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482236, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1246), '}'), '')))), '[^-]', ''))) AS ?step2247) . BIND(((?step2247 + ?targetMotifMatchRegionMatchBeginPositionMF_00482237) - 1) AS ?thisPositionOn54) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482234, 1, (STRLEN(?templateMotifCigarP0A407MF_00482234) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482234, CONCAT('^(?:-*[^-]){', STR(((400 - ?templateMotifSequenceMatchBeginPositionP0A407235) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1248) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482236, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482236) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482236, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1248), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482236, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482236) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482236, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1248), '}'), '')))), '[^-]', ''))) AS ?step2249) . BIND(((?step2249 + ?targetMotifMatchRegionMatchBeginPositionMF_00482237) - 1) AS ?thisPositionOn55) . BIND(?this AS ?pfs1t250) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn54))) AS ?pfsb52) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn55))) AS ?pfse53) . FILTER ((BOUND(?thisPositionOn54) && BOUND(?thisPositionOn55))) . BIND(URI(CONCAT(STR(?this), '#MF_00482a51')) AS ?annotation51) . BIND(?this AS ?pfs50) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch255 faldo:location ?templateMotifSequenceMatchRegionP0A407256 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A407258 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A407MF_00482251 . ?templateMotifSequenceMatchRegionP0A407256 faldo:begin ?templateMotifSequenceMatchBeginP0A407257 . ?templateMotifSequenceMatchBeginP0A407257 faldo:position ?templateMotifSequenceMatchBeginPositionP0A407252 ; faldo:reference isoform:P0A407-1 . ?templateMotifSequenceProfileAlignmentOperationP0A407258 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . ?targetMotifMatch259 faldo:location ?targetMotifMatchRegionMatch260 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00482262 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A407MF_00482253 . ?targetMotifMatchRegionMatch260 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00482261 . ?targetMotifMatchRegionMatchBeginMF_00482261 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00482254 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00482262 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482251, 1, (STRLEN(?templateMotifCigarP0A407MF_00482251) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482251, CONCAT('^(?:-*[^-]){', STR(((420 - ?templateMotifSequenceMatchBeginPositionP0A407252) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1263) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482253, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482253) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482253, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1263), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482253, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482253) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482253, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1263), '}'), '')))), '[^-]', ''))) AS ?step2264) . BIND(((?step2264 + ?targetMotifMatchRegionMatchBeginPositionMF_00482254) - 1) AS ?thisPositionOn60) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482251, 1, (STRLEN(?templateMotifCigarP0A407MF_00482251) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482251, CONCAT('^(?:-*[^-]){', STR(((449 - ?templateMotifSequenceMatchBeginPositionP0A407252) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1265) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482253, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482253) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482253, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1265), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482253, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482253) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482253, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1265), '}'), '')))), '[^-]', ''))) AS ?step2266) . BIND(((?step2266 + ?targetMotifMatchRegionMatchBeginPositionMF_00482254) - 1) AS ?thisPositionOn61) . BIND(?this AS ?pfs1t267) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn60))) AS ?pfsb58) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn61))) AS ?pfse59) . FILTER ((BOUND(?thisPositionOn60) && BOUND(?thisPositionOn61))) . BIND(URI(CONCAT(STR(?this), '#MF_00482a57')) AS ?annotation57) . BIND(?this AS ?pfs56) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch272 faldo:location ?templateMotifSequenceMatchRegionP0A407273 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A407275 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A407MF_00482268 . ?templateMotifSequenceMatchRegionP0A407273 faldo:begin ?templateMotifSequenceMatchBeginP0A407274 . ?templateMotifSequenceMatchBeginP0A407274 faldo:position ?templateMotifSequenceMatchBeginPositionP0A407269 ; faldo:reference isoform:P0A407-1 . ?templateMotifSequenceProfileAlignmentOperationP0A407275 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . ?targetMotifMatch276 faldo:location ?targetMotifMatchRegionMatch277 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00482279 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A407MF_00482270 . ?targetMotifMatchRegionMatch277 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00482278 . ?targetMotifMatchRegionMatchBeginMF_00482278 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00482271 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00482279 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482268, 1, (STRLEN(?templateMotifCigarP0A407MF_00482268) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482268, CONCAT('^(?:-*[^-]){', STR(((521 - ?templateMotifSequenceMatchBeginPositionP0A407269) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1280) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482270, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482270) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482270, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1280), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482270, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482270) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482270, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1280), '}'), '')))), '[^-]', ''))) AS ?step2281) . BIND(((?step2281 + ?targetMotifMatchRegionMatchBeginPositionMF_00482271) - 1) AS ?thisPositionOn66) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482268, 1, (STRLEN(?templateMotifCigarP0A407MF_00482268) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482268, CONCAT('^(?:-*[^-]){', STR(((545 - ?templateMotifSequenceMatchBeginPositionP0A407269) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1282) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482270, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482270) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482270, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1282), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482270, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482270) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482270, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1282), '}'), '')))), '[^-]', ''))) AS ?step2283) . BIND(((?step2283 + ?targetMotifMatchRegionMatchBeginPositionMF_00482271) - 1) AS ?thisPositionOn67) . BIND(?this AS ?pfs1t284) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn66))) AS ?pfsb64) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn67))) AS ?pfse65) . FILTER ((BOUND(?thisPositionOn66) && BOUND(?thisPositionOn67))) . BIND(URI(CONCAT(STR(?this), '#MF_00482a63')) AS ?annotation63) . BIND(?this AS ?pfs62) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch289 faldo:location ?templateMotifSequenceMatchRegionP0A407290 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A407292 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A407MF_00482285 . ?templateMotifSequenceMatchRegionP0A407290 faldo:begin ?templateMotifSequenceMatchBeginP0A407291 . ?templateMotifSequenceMatchBeginP0A407291 faldo:position ?templateMotifSequenceMatchBeginPositionP0A407286 ; faldo:reference isoform:P0A407-1 . ?templateMotifSequenceProfileAlignmentOperationP0A407292 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . ?targetMotifMatch293 faldo:location ?targetMotifMatchRegionMatch294 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00482296 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A407MF_00482287 . ?targetMotifMatchRegionMatch294 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00482295 . ?targetMotifMatchRegionMatchBeginMF_00482295 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00482288 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00482296 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482285, 1, (STRLEN(?templateMotifCigarP0A407MF_00482285) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482285, CONCAT('^(?:-*[^-]){', STR(((579 - ?templateMotifSequenceMatchBeginPositionP0A407286) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1297) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482287, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482287) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482287, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1297), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482287, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482287) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482287, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1297), '}'), '')))), '[^-]', ''))) AS ?step2298) . BIND(((?step2298 + ?targetMotifMatchRegionMatchBeginPositionMF_00482288) - 1) AS ?thisPositionOn72) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482285, 1, (STRLEN(?templateMotifCigarP0A407MF_00482285) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482285, CONCAT('^(?:-*[^-]){', STR(((610 - ?templateMotifSequenceMatchBeginPositionP0A407286) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1299) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482287, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482287) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482287, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1299), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482287, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482287) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482287, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1299), '}'), '')))), '[^-]', ''))) AS ?step2300) . BIND(((?step2300 + ?targetMotifMatchRegionMatchBeginPositionMF_00482288) - 1) AS ?thisPositionOn73) . BIND(?this AS ?pfs1t301) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn72))) AS ?pfsb70) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn73))) AS ?pfse71) . FILTER ((BOUND(?thisPositionOn72) && BOUND(?thisPositionOn73))) . BIND(URI(CONCAT(STR(?this), '#MF_00482a69')) AS ?annotation69) . BIND(?this AS ?pfs68) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch306 faldo:location ?templateMotifSequenceMatchRegionP0A407307 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A407309 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A407MF_00482302 . ?templateMotifSequenceMatchRegionP0A407307 faldo:begin ?templateMotifSequenceMatchBeginP0A407308 . ?templateMotifSequenceMatchBeginP0A407308 faldo:position ?templateMotifSequenceMatchBeginPositionP0A407303 ; faldo:reference isoform:P0A407-1 . ?templateMotifSequenceProfileAlignmentOperationP0A407309 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . ?targetMotifMatch310 faldo:location ?targetMotifMatchRegionMatch311 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00482313 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A407MF_00482304 . ?targetMotifMatchRegionMatch311 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00482312 . ?targetMotifMatchRegionMatchBeginMF_00482312 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00482305 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00482313 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482302, 1, (STRLEN(?templateMotifCigarP0A407MF_00482302) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482302, CONCAT('^(?:-*[^-]){', STR(((651 - ?templateMotifSequenceMatchBeginPositionP0A407303) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1314) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482304, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482304) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482304, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1314), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482304, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482304) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482304, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1314), '}'), '')))), '[^-]', ''))) AS ?step2315) . BIND(((?step2315 + ?targetMotifMatchRegionMatchBeginPositionMF_00482305) - 1) AS ?thisPositionOn78) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482302, 1, (STRLEN(?templateMotifCigarP0A407MF_00482302) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482302, CONCAT('^(?:-*[^-]){', STR(((672 - ?templateMotifSequenceMatchBeginPositionP0A407303) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1316) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482304, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482304) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482304, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1316), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482304, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482304) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482304, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1316), '}'), '')))), '[^-]', ''))) AS ?step2317) . BIND(((?step2317 + ?targetMotifMatchRegionMatchBeginPositionMF_00482305) - 1) AS ?thisPositionOn79) . BIND(?this AS ?pfs1t318) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn78))) AS ?pfsb76) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn79))) AS ?pfse77) . FILTER ((BOUND(?thisPositionOn78) && BOUND(?thisPositionOn79))) . BIND(URI(CONCAT(STR(?this), '#MF_00482a75')) AS ?annotation75) . BIND(?this AS ?pfs74) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch323 faldo:location ?templateMotifSequenceMatchRegionP0A407324 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A407326 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A407MF_00482319 . ?templateMotifSequenceMatchRegionP0A407324 faldo:begin ?templateMotifSequenceMatchBeginP0A407325 . ?templateMotifSequenceMatchBeginP0A407325 faldo:position ?templateMotifSequenceMatchBeginPositionP0A407320 ; faldo:reference isoform:P0A407-1 . ?templateMotifSequenceProfileAlignmentOperationP0A407326 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . ?targetMotifMatch327 faldo:location ?targetMotifMatchRegionMatch328 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00482330 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A407MF_00482321 . ?targetMotifMatchRegionMatch328 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00482329 . ?targetMotifMatchRegionMatchBeginMF_00482329 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00482322 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00482330 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482319, 1, (STRLEN(?templateMotifCigarP0A407MF_00482319) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482319, CONCAT('^(?:-*[^-]){', STR(((709 - ?templateMotifSequenceMatchBeginPositionP0A407320) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1331) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482321, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482321) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482321, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1331), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482321, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482321) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482321, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1331), '}'), '')))), '[^-]', ''))) AS ?step2332) . BIND(((?step2332 + ?targetMotifMatchRegionMatchBeginPositionMF_00482322) - 1) AS ?thisPositionOn84) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482319, 1, (STRLEN(?templateMotifCigarP0A407MF_00482319) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482319, CONCAT('^(?:-*[^-]){', STR(((737 - ?templateMotifSequenceMatchBeginPositionP0A407320) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1333) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482321, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482321) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482321, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1333), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482321, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482321) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482321, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1333), '}'), '')))), '[^-]', ''))) AS ?step2334) . BIND(((?step2334 + ?targetMotifMatchRegionMatchBeginPositionMF_00482322) - 1) AS ?thisPositionOn85) . BIND(?this AS ?pfs1t335) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn84))) AS ?pfsb82) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn85))) AS ?pfse83) . FILTER ((BOUND(?thisPositionOn84) && BOUND(?thisPositionOn85))) . BIND(URI(CONCAT(STR(?this), '#MF_00482a81')) AS ?annotation81) . BIND(?this AS ?pfs80) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch340 faldo:location ?templateMotifSequenceMatchRegionP0A407341 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A407343 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A407MF_00482336 . ?templateMotifSequenceMatchRegionP0A407341 faldo:begin ?templateMotifSequenceMatchBeginP0A407342 . ?templateMotifSequenceMatchBeginP0A407342 faldo:position ?templateMotifSequenceMatchBeginPositionP0A407337 ; faldo:reference isoform:P0A407-1 . ?templateMotifSequenceProfileAlignmentOperationP0A407343 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . ?targetMotifMatch344 faldo:location ?targetMotifMatchRegionMatch345 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00482347 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A407MF_00482338 . ?targetMotifMatchRegionMatch345 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00482346 . ?targetMotifMatchRegionMatchBeginMF_00482346 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00482339 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00482347 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482336, 1, (STRLEN(?templateMotifCigarP0A407MF_00482336) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482336, CONCAT('^(?:-*[^-]){', STR(((566 - ?templateMotifSequenceMatchBeginPositionP0A407337) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1348) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482338, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482338) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482338, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1348), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482338, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482338) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482338, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1348), '}'), '')))), '[^-]', ''))) AS ?step2349) . BIND(((?step2349 + ?targetMotifMatchRegionMatchBeginPositionMF_00482339) - 1) AS ?thisPositionOn91) . BIND(?thisPositionOn91 AS ?thisPositionOn92) . BIND(?this AS ?pfs1t350) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn91))) AS ?pfsb88) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn92))) AS ?pfse89) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn91, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_00482a87')) AS ?annotation87) . BIND(?this AS ?pfs86) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch355 faldo:location ?templateMotifSequenceMatchRegionP0A407356 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A407358 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A407MF_00482351 . ?templateMotifSequenceMatchRegionP0A407356 faldo:begin ?templateMotifSequenceMatchBeginP0A407357 . ?templateMotifSequenceMatchBeginP0A407357 faldo:position ?templateMotifSequenceMatchBeginPositionP0A407352 ; faldo:reference isoform:P0A407-1 . ?templateMotifSequenceProfileAlignmentOperationP0A407358 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . ?targetMotifMatch359 faldo:location ?targetMotifMatchRegionMatch360 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00482362 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A407MF_00482353 . ?targetMotifMatchRegionMatch360 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00482361 . ?targetMotifMatchRegionMatchBeginMF_00482361 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00482354 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00482362 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482351, 1, (STRLEN(?templateMotifCigarP0A407MF_00482351) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482351, CONCAT('^(?:-*[^-]){', STR(((575 - ?templateMotifSequenceMatchBeginPositionP0A407352) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1363) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482353, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482353) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482353, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1363), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482353, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482353) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482353, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1363), '}'), '')))), '[^-]', ''))) AS ?step2364) . BIND(((?step2364 + ?targetMotifMatchRegionMatchBeginPositionMF_00482354) - 1) AS ?thisPositionOn98) . BIND(?thisPositionOn98 AS ?thisPositionOn99) . BIND(?this AS ?pfs1t365) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn98))) AS ?pfsb95) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn99))) AS ?pfse96) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn98, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_00482a94')) AS ?annotation94) . BIND(?this AS ?pfs93) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch370 faldo:location ?templateMotifSequenceMatchRegionP0A407371 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A407373 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A407MF_00482366 . ?templateMotifSequenceMatchRegionP0A407371 faldo:begin ?templateMotifSequenceMatchBeginP0A407372 . ?templateMotifSequenceMatchBeginP0A407372 faldo:position ?templateMotifSequenceMatchBeginPositionP0A407367 ; faldo:reference isoform:P0A407-1 . ?templateMotifSequenceProfileAlignmentOperationP0A407373 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . ?targetMotifMatch374 faldo:location ?targetMotifMatchRegionMatch375 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00482377 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A407MF_00482368 . ?targetMotifMatchRegionMatch375 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00482376 . ?targetMotifMatchRegionMatchBeginMF_00482376 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00482369 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00482377 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482366, 1, (STRLEN(?templateMotifCigarP0A407MF_00482366) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482366, CONCAT('^(?:-*[^-]){', STR(((678 - ?templateMotifSequenceMatchBeginPositionP0A407367) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1378) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482368, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482368) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482368, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1378), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482368, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482368) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482368, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1378), '}'), '')))), '[^-]', ''))) AS ?step2379) . BIND(((?step2379 + ?targetMotifMatchRegionMatchBeginPositionMF_00482369) - 1) AS ?thisPositionOn105) . BIND(?thisPositionOn105 AS ?thisPositionOn106) . BIND(?this AS ?pfs1t380) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn105))) AS ?pfsb102) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn106))) AS ?pfse103) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn105, 1) = 'W')) . BIND(URI(CONCAT(STR(?this), '#MF_00482a101')) AS ?annotation101) . BIND(?this AS ?pfs100) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch385 faldo:location ?templateMotifSequenceMatchRegionP0A407386 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A407388 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A407MF_00482381 . ?templateMotifSequenceMatchRegionP0A407386 faldo:begin ?templateMotifSequenceMatchBeginP0A407387 . ?templateMotifSequenceMatchBeginP0A407387 faldo:position ?templateMotifSequenceMatchBeginPositionP0A407382 ; faldo:reference isoform:P0A407-1 . ?templateMotifSequenceProfileAlignmentOperationP0A407388 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . ?targetMotifMatch389 faldo:location ?targetMotifMatchRegionMatch390 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00482392 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A407MF_00482383 . ?targetMotifMatchRegionMatch390 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00482391 . ?targetMotifMatchRegionMatchBeginMF_00482391 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00482384 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00482392 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:1218 . })) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482381, 1, (STRLEN(?templateMotifCigarP0A407MF_00482381) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482381, CONCAT('^(?:-*[^-]){', STR(((661 - ?templateMotifSequenceMatchBeginPositionP0A407382) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1393) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482383, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482383) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482383, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1393), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482383, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482383) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482383, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1393), '}'), '')))), '[^-]', ''))) AS ?step2394) . BIND(((?step2394 + ?targetMotifMatchRegionMatchBeginPositionMF_00482384) - 1) AS ?thisPositionOn112) . BIND(?thisPositionOn112 AS ?thisPositionOn113) . BIND(?this AS ?pfs2t395) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn112))) AS ?pfsb109) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn113))) AS ?pfse110) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn112, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_00482a108')) AS ?annotation108) . BIND(?this AS ?pfs107) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch400 faldo:location ?templateMotifSequenceMatchRegionP0A407401 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A407403 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A407MF_00482396 . ?templateMotifSequenceMatchRegionP0A407401 faldo:begin ?templateMotifSequenceMatchBeginP0A407402 . ?templateMotifSequenceMatchBeginP0A407402 faldo:position ?templateMotifSequenceMatchBeginPositionP0A407397 ; faldo:reference isoform:P0A407-1 . ?templateMotifSequenceProfileAlignmentOperationP0A407403 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . ?targetMotifMatch404 faldo:location ?targetMotifMatchRegionMatch405 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00482407 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A407MF_00482398 . ?targetMotifMatchRegionMatch405 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00482406 . ?targetMotifMatchRegionMatchBeginMF_00482406 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00482399 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00482407 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:1218 . })) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482396, 1, (STRLEN(?templateMotifCigarP0A407MF_00482396) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482396, CONCAT('^(?:-*[^-]){', STR(((669 - ?templateMotifSequenceMatchBeginPositionP0A407397) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1408) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482398, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482398) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482398, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1408), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482398, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482398) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482398, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1408), '}'), '')))), '[^-]', ''))) AS ?step2409) . BIND(((?step2409 + ?targetMotifMatchRegionMatchBeginPositionMF_00482399) - 1) AS ?thisPositionOn119) . BIND(?thisPositionOn119 AS ?thisPositionOn120) . BIND(?this AS ?pfs2t410) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn119))) AS ?pfsb116) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn120))) AS ?pfse117) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn119, 1) = 'M')) . BIND(URI(CONCAT(STR(?this), '#MF_00482a115')) AS ?annotation115) . BIND(?this AS ?pfs114) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch415 faldo:location ?templateMotifSequenceMatchRegionP0A407416 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A407418 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A407MF_00482411 . ?templateMotifSequenceMatchRegionP0A407416 faldo:begin ?templateMotifSequenceMatchBeginP0A407417 . ?templateMotifSequenceMatchBeginP0A407417 faldo:position ?templateMotifSequenceMatchBeginPositionP0A407412 ; faldo:reference isoform:P0A407-1 . ?templateMotifSequenceProfileAlignmentOperationP0A407418 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . ?targetMotifMatch419 faldo:location ?targetMotifMatchRegionMatch420 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00482422 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A407MF_00482413 . ?targetMotifMatchRegionMatch420 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00482421 . ?targetMotifMatchRegionMatchBeginMF_00482421 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00482414 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00482422 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:1218 . })) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482411, 1, (STRLEN(?templateMotifCigarP0A407MF_00482411) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482411, CONCAT('^(?:-*[^-]){', STR(((677 - ?templateMotifSequenceMatchBeginPositionP0A407412) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1423) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482413, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482413) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482413, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1423), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482413, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482413) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482413, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1423), '}'), '')))), '[^-]', ''))) AS ?step2424) . BIND(((?step2424 + ?targetMotifMatchRegionMatchBeginPositionMF_00482414) - 1) AS ?thisPositionOn126) . BIND(?thisPositionOn126 AS ?thisPositionOn127) . BIND(?this AS ?pfs2t425) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn126))) AS ?pfsb123) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn127))) AS ?pfse124) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn126, 1) = 'Y')) . BIND(URI(CONCAT(STR(?this), '#MF_00482a122')) AS ?annotation122) . BIND(?this AS ?pfs121) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch430 faldo:location ?templateMotifSequenceMatchRegionP0A407431 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A407433 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A407MF_00482426 . ?templateMotifSequenceMatchRegionP0A407431 faldo:begin ?templateMotifSequenceMatchBeginP0A407432 . ?templateMotifSequenceMatchBeginP0A407432 faldo:position ?templateMotifSequenceMatchBeginPositionP0A407427 ; faldo:reference isoform:P0A407-1 . ?templateMotifSequenceProfileAlignmentOperationP0A407433 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . ?targetMotifMatch434 faldo:location ?targetMotifMatchRegionMatch435 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00482437 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A407MF_00482428 . ?targetMotifMatchRegionMatch435 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00482436 . ?targetMotifMatchRegionMatchBeginMF_00482436 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00482429 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00482437 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:1218 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482426, 1, (STRLEN(?templateMotifCigarP0A407MF_00482426) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482426, CONCAT('^(?:-*[^-]){', STR(((661 - ?templateMotifSequenceMatchBeginPositionP0A407427) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1438) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482428, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482428) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482428, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1438), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482428, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482428) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482428, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1438), '}'), '')))), '[^-]', ''))) AS ?step2439) . BIND(((?step2439 + ?targetMotifMatchRegionMatchBeginPositionMF_00482429) - 1) AS ?thisPositionOn133) . BIND(?thisPositionOn133 AS ?thisPositionOn134) . BIND(?this AS ?pfs3t440) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn133))) AS ?pfsb130) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn134))) AS ?pfse131) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn133, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_00482a129')) AS ?annotation129) . BIND(?this AS ?pfs128) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch445 faldo:location ?templateMotifSequenceMatchRegionP0A407446 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A407448 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A407MF_00482441 . ?templateMotifSequenceMatchRegionP0A407446 faldo:begin ?templateMotifSequenceMatchBeginP0A407447 . ?templateMotifSequenceMatchBeginP0A407447 faldo:position ?templateMotifSequenceMatchBeginPositionP0A407442 ; faldo:reference isoform:P0A407-1 . ?templateMotifSequenceProfileAlignmentOperationP0A407448 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . ?targetMotifMatch449 faldo:location ?targetMotifMatchRegionMatch450 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00482452 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A407MF_00482443 . ?targetMotifMatchRegionMatch450 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00482451 . ?targetMotifMatchRegionMatchBeginMF_00482451 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00482444 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00482452 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:1218 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482441, 1, (STRLEN(?templateMotifCigarP0A407MF_00482441) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482441, CONCAT('^(?:-*[^-]){', STR(((669 - ?templateMotifSequenceMatchBeginPositionP0A407442) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1453) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482443, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482443) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482443, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1453), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482443, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482443) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482443, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1453), '}'), '')))), '[^-]', ''))) AS ?step2454) . BIND(((?step2454 + ?targetMotifMatchRegionMatchBeginPositionMF_00482444) - 1) AS ?thisPositionOn140) . BIND(?thisPositionOn140 AS ?thisPositionOn141) . BIND(?this AS ?pfs3t455) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn140))) AS ?pfsb137) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn141))) AS ?pfse138) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn140, 1) = 'M')) . BIND(URI(CONCAT(STR(?this), '#MF_00482a136')) AS ?annotation136) . BIND(?this AS ?pfs135) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch460 faldo:location ?templateMotifSequenceMatchRegionP0A407461 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A407463 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A407MF_00482456 . ?templateMotifSequenceMatchRegionP0A407461 faldo:begin ?templateMotifSequenceMatchBeginP0A407462 . ?templateMotifSequenceMatchBeginP0A407462 faldo:position ?templateMotifSequenceMatchBeginPositionP0A407457 ; faldo:reference isoform:P0A407-1 . ?templateMotifSequenceProfileAlignmentOperationP0A407463 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . ?targetMotifMatch464 faldo:location ?targetMotifMatchRegionMatch465 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00482467 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A407MF_00482458 . ?targetMotifMatchRegionMatch465 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00482466 . ?targetMotifMatchRegionMatchBeginMF_00482466 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00482459 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00482467 edam:has_input signature:MF_00482 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:1218 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A407MF_00482456, 1, (STRLEN(?templateMotifCigarP0A407MF_00482456) - STRLEN(REPLACE(?templateMotifCigarP0A407MF_00482456, CONCAT('^(?:-*[^-]){', STR(((677 - ?templateMotifSequenceMatchBeginPositionP0A407457) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1468) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A407MF_00482458, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482458) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482458, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1468), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A407MF_00482458, 1, (STRLEN(?targetMotifMatchCigarP0A407MF_00482458) - STRLEN(REPLACE(?targetMotifMatchCigarP0A407MF_00482458, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1468), '}'), '')))), '[^-]', ''))) AS ?step2469) . BIND(((?step2469 + ?targetMotifMatchRegionMatchBeginPositionMF_00482459) - 1) AS ?thisPositionOn147) . BIND(?thisPositionOn147 AS ?thisPositionOn148) . BIND(?this AS ?pfs3t470) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn147))) AS ?pfsb144) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn148))) AS ?pfse145) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn147, 1) = 'Y')) . BIND(URI(CONCAT(STR(?this), '#MF_00482a143')) AS ?annotation143) . BIND(?this AS ?pfs142) . } OPTIONAL { ?this a up:Protein . { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } BIND(?this AS ?case4) . BIND(URI(CONCAT(STR(?this), '#MF_00482a5')) AS ?name5) . BIND(URI(CONCAT(STR(?this), '#MF_00482a6')) AS ?name6) . BIND(URI(CONCAT(STR(?this), '#MF_00482a7')) AS ?name7) . } OPTIONAL { ?this a up:Protein . FILTER (! (EXISTS { { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } })) . BIND(?this AS ?case8) . BIND(URI(CONCAT(STR(?this), '#MF_00482a9')) AS ?name9) . BIND(URI(CONCAT(STR(?this), '#MF_00482a10')) AS ?name10) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:33071 . BIND(?this AS ?case11) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:1218 . BIND(?this AS ?case12) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:33071 . })) . BIND(?this AS ?case13) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:35493 . { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } BIND(?this AS ?case14) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:33071 . FILTER (! (EXISTS { { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } })) . BIND(?this AS ?case15) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:1117 . })) . BIND(?this AS ?case16) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } })) . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:33071 . })) . BIND(?this AS ?case17) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:1117 . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:1218 . })) . BIND(?this AS ?case18) . } OPTIONAL { ?this a up:Protein . { ?this up:organism ?thisOrganism . { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:35493 . })) . } UNION { ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:1117 . } BIND(?this AS ?case19) . } }