CONSTRUCT { _:198128 up:source unirule:MF_00504 . _:198129 up:source unirule:MF_00504 . _:198130 up:source unirule:MF_00504 . _:198131 up:source unirule:MF_00504 . _:198132 up:source unirule:MF_00504 . _:198133 up:source unirule:MF_00504 . _:198134 up:source unirule:MF_00504 . _:198135 up:source unirule:MF_00504 . _:198136 up:source unirule:MF_00504 . _:198137 up:source unirule:MF_00504 . _:198138 up:source unirule:MF_00504 . _:198139 up:source unirule:MF_00504 . _:198140 up:source unirule:MF_00504 . _:198141 up:source unirule:MF_00504 . _:198142 up:source unirule:MF_00504 . _:198143 up:source unirule:MF_00504 . _:198144 up:source unirule:MF_00504 . _:198145 up:source unirule:MF_00504 . _:198146 up:source unirule:MF_00504 . _:198147 up:source unirule:MF_00504 . _:198148 up:source unirule:MF_00504 . _:198149 up:source unirule:MF_00504 . _:198150 up:source unirule:MF_00504 . _:198151 up:source unirule:MF_00504 . _:198152 up:source unirule:MF_00504 . _:198153 up:source unirule:MF_00504 . _:198154 up:source unirule:MF_00504 . _:198155 up:source unirule:MF_00504 . ?this up:alternativeName ?name1 ; up:annotation ?annotation3 , ?annotation4 , ?annotation6 , ?annotation7 , ?annotation8 , ?annotation10 ; up:classifiedWith GO:0004177 , GO:0005737 , GO:0006508 , GO:0030145 , keyword:31 , keyword:378 , keyword:464 , keyword:479 , keyword:645 , keyword:963 ; up:recommendedName ?name0 . ?name0 up:ecName '3.4.11.23' ; up:fullName 'Peptidase B' ; rdf:type up:Structured_Name . ?name1 up:fullName 'Aminopeptidase B' ; rdf:type up:Structured_Name . ?gene2 skos:prefLabel 'pepB' . ?annotation3 a up:Function_Annotation ; rdfs:comment 'Probably plays an important role in intracellular peptide degradation.' . ?annotation4 up:activity ?activity5 ; rdf:type up:Catalytic_Activity_Annotation . ?activity5 up:enzymeClass <http://purl.uniprot.org/enzyme/3.4.11.23>. ?annotation6 up:cofactor chebi:29035 ; rdf:type up:Cofactor_Annotation ; rdfs:comment 'Binds 2 manganese ions per subunit.' . ?annotation7 a up:Subunit_Annotation ; rdfs:comment 'Homohexamer.' . ?annotation8 a up:Subcellular_Location_Annotation . ?annotation8li9 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation10 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the peptidase M17 family.' . ?pfs11 up:annotation ?annotation12 . ?annotation12 faldo:begin ?pfsb13 ; faldo:end ?pfse14 ; rdf:type up:Active_Site_Annotation . ?pfsb13 faldo:position ?thisPositionOn15 ; rdf:type faldo:ExactPosition . ?pfse14 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?pfs17 up:annotation ?annotation18 . ?annotation18 faldo:begin ?pfsb19 ; faldo:end ?pfse20 ; rdf:type up:Active_Site_Annotation . ?pfsb19 faldo:position ?thisPositionOn21 ; rdf:type faldo:ExactPosition . ?pfse20 faldo:position ?thisPositionOn22 ; rdf:type faldo:ExactPosition . ?pfs23 up:annotation ?annotation24 . ?annotation24 faldo:begin ?pfsb25 ; faldo:end ?pfse26 ; up:ligand ?ligand27 ; rdf:type up:Binding_Site_Annotation . ?pfsb25 faldo:position ?thisPositionOn28 ; rdf:type faldo:ExactPosition . ?pfse26 faldo:position ?thisPositionOn29 ; rdf:type faldo:ExactPosition . ?ligand27 rdfs:subClassOf chebi:29035 . ?pfs30 up:annotation ?annotation31 . ?annotation31 faldo:begin ?pfsb32 ; faldo:end ?pfse33 ; up:ligand ?ligand34 ; rdf:type up:Binding_Site_Annotation . ?pfsb32 faldo:position ?thisPositionOn35 ; rdf:type faldo:ExactPosition . ?pfse33 faldo:position ?thisPositionOn36 ; rdf:type faldo:ExactPosition . ?ligand34 rdfs:subClassOf chebi:29035 . ?pfs37 up:annotation ?annotation38 . ?annotation38 faldo:begin ?pfsb39 ; faldo:end ?pfse40 ; up:ligand ?ligand41 ; rdf:type up:Binding_Site_Annotation . ?pfsb39 faldo:position ?thisPositionOn42 ; rdf:type faldo:ExactPosition . ?pfse40 faldo:position ?thisPositionOn43 ; rdf:type faldo:ExactPosition . ?ligand41 rdfs:subClassOf chebi:29035 . ?pfs44 up:annotation ?annotation45 . ?annotation45 faldo:begin ?pfsb46 ; faldo:end ?pfse47 ; up:ligand ?ligand48 ; rdf:type up:Binding_Site_Annotation . ?pfsb46 faldo:position ?thisPositionOn49 ; rdf:type faldo:ExactPosition . ?pfse47 faldo:position ?thisPositionOn50 ; rdf:type faldo:ExactPosition . ?ligand48 rdfs:subClassOf chebi:29035 . ?pfs51 up:annotation ?annotation52 . ?annotation52 faldo:begin ?pfsb53 ; faldo:end ?pfse54 ; up:ligand ?ligand55 ; rdf:type up:Binding_Site_Annotation . ?pfsb53 faldo:position ?thisPositionOn56 ; rdf:type faldo:ExactPosition . ?pfse54 faldo:position ?thisPositionOn57 ; rdf:type faldo:ExactPosition . ?ligand55 rdfs:subClassOf chebi:29035 . ?pfs58 up:annotation ?annotation59 . ?annotation59 faldo:begin ?pfsb60 ; faldo:end ?pfse61 ; up:ligand ?ligand62 ; rdf:type up:Binding_Site_Annotation . ?pfsb60 faldo:position ?thisPositionOn63 ; rdf:type faldo:ExactPosition . ?pfse61 faldo:position ?thisPositionOn64 ; rdf:type faldo:ExactPosition . ?ligand62 rdfs:subClassOf chebi:29035 . ?pfs65 up:annotation ?annotation66 . ?annotation66 faldo:begin ?pfsb67 ; faldo:end ?pfse68 ; up:ligand ?ligand69 ; rdf:type up:Binding_Site_Annotation . ?pfsb67 faldo:position ?thisPositionOn70 ; rdf:type faldo:ExactPosition . ?pfse68 faldo:position ?thisPositionOn71 ; rdf:type faldo:ExactPosition . ?ligand69 rdfs:subClassOf chebi:29035 . _:198156 a rdf:Statement ; up:attribution _:198128 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:198157 a rdf:Statement ; up:attribution _:198129 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name1 . _:198158 a rdf:Statement ; up:attribution _:198130 ; rdf:subject ?gene2 ; rdf:predicate up:encodedBy ; rdf:object ?gene2 . _:198159 a rdf:Statement ; up:attribution _:198131 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:198160 a rdf:Statement ; up:attribution _:198132 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:198161 a rdf:Statement ; up:attribution _:198133 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:198162 a rdf:Statement ; up:attribution _:198134 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:198163 a rdf:Statement ; up:attribution _:198135 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation8 . _:198164 a rdf:Statement ; up:attribution _:198136 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation10 . _:198165 a rdf:Statement ; up:attribution _:198137 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:963 . _:198166 a rdf:Statement ; up:attribution _:198138 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:378 . _:198167 a rdf:Statement ; up:attribution _:198139 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:645 . _:198168 a rdf:Statement ; up:attribution _:198140 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:31 . _:198169 a rdf:Statement ; up:attribution _:198141 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:464 . _:198170 a rdf:Statement ; up:attribution _:198142 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:198171 a rdf:Statement ; up:attribution _:198143 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0004177 . _:198172 a rdf:Statement ; up:attribution _:198144 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0030145 . _:198173 a rdf:Statement ; up:attribution _:198145 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006508 . _:198174 a rdf:Statement ; up:attribution _:198146 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005737 . _:198175 a rdf:Statement ; up:source unirule:MF_00504 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:198176 a rdf:Statement ; up:attribution _:198147 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:198177 a rdf:Statement ; up:source unirule:MF_00504 ; rdf:subject ?pfs17 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:198178 a rdf:Statement ; up:attribution _:198148 ; rdf:subject ?pfs17 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:198179 a rdf:Statement ; up:source unirule:MF_00504 ; rdf:subject ?pfs23 ; rdf:predicate up:annotation ; rdf:object ?annotation24 . _:198180 a rdf:Statement ; up:attribution _:198149 ; rdf:subject ?pfs23 ; rdf:predicate up:annotation ; rdf:object ?annotation24 . _:198181 a rdf:Statement ; up:source unirule:MF_00504 ; rdf:subject ?pfs30 ; rdf:predicate up:annotation ; rdf:object ?annotation31 . _:198182 a rdf:Statement ; up:attribution _:198150 ; rdf:subject ?pfs30 ; rdf:predicate up:annotation ; rdf:object ?annotation31 . _:198183 a rdf:Statement ; up:source unirule:MF_00504 ; rdf:subject ?pfs37 ; rdf:predicate up:annotation ; rdf:object ?annotation38 . _:198184 a rdf:Statement ; up:attribution _:198151 ; rdf:subject ?pfs37 ; rdf:predicate up:annotation ; rdf:object ?annotation38 . _:198185 a rdf:Statement ; up:source unirule:MF_00504 ; rdf:subject ?pfs44 ; rdf:predicate up:annotation ; rdf:object ?annotation45 . _:198186 a rdf:Statement ; up:attribution _:198152 ; rdf:subject ?pfs44 ; rdf:predicate up:annotation ; rdf:object ?annotation45 . _:198187 a rdf:Statement ; up:source unirule:MF_00504 ; rdf:subject ?pfs51 ; rdf:predicate up:annotation ; rdf:object ?annotation52 . _:198188 a rdf:Statement ; up:attribution _:198153 ; rdf:subject ?pfs51 ; rdf:predicate up:annotation ; rdf:object ?annotation52 . _:198189 a rdf:Statement ; up:source unirule:MF_00504 ; rdf:subject ?pfs58 ; rdf:predicate up:annotation ; rdf:object ?annotation59 . _:198190 a rdf:Statement ; up:attribution _:198154 ; rdf:subject ?pfs58 ; rdf:predicate up:annotation ; rdf:object ?annotation59 . _:198191 a rdf:Statement ; up:source unirule:MF_00504 ; rdf:subject ?pfs65 ; rdf:predicate up:annotation ; rdf:object ?annotation66 . _:198192 a rdf:Statement ; up:attribution _:198155 ; rdf:subject ?pfs65 ; rdf:predicate up:annotation ; rdf:object ?annotation66 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00504 #Rule MF_00504 Created by:gattiker on:2001-12-03 Modified by:ecastro on:2022-11-19 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00504 . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(URI(CONCAT(STR(?this), '#MF_00504a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_00504a1')) AS ?name1) . BIND(URI(CONCAT(STR(?this), '#MF_00504a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_00504a4')) AS ?annotation4) . BIND(URI(CONCAT(STR(?this), '#MF_00504a6')) AS ?annotation6) . BIND(URI(CONCAT(STR(?this), '#MF_00504a7')) AS ?annotation7) . BIND(URI(CONCAT(STR(?this), '#MF_00504a8')) AS ?annotation8) . BIND(URI(CONCAT(STR(?this), '#MF_00504a10')) AS ?annotation10) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch76 faldo:location ?templateMotifSequenceMatchRegionP3709577 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP3709579 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37095MF_0050472 . ?templateMotifSequenceMatchRegionP3709577 faldo:begin ?templateMotifSequenceMatchBeginP3709578 . ?templateMotifSequenceMatchBeginP3709578 faldo:position ?templateMotifSequenceMatchBeginPositionP3709573 ; faldo:reference isoform:P37095-1 . ?templateMotifSequenceProfileAlignmentOperationP3709579 edam:has_input signature:MF_00504 ; rdf:type edam:operation_0300 . ?targetMotifMatch80 faldo:location ?targetMotifMatchRegionMatch81 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0050483 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37095MF_0050474 . ?targetMotifMatchRegionMatch81 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0050482 . ?targetMotifMatchRegionMatchBeginMF_0050482 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0050475 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0050483 edam:has_input signature:MF_00504 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37095MF_0050472, 1, (STRLEN(?templateMotifCigarP37095MF_0050472) - STRLEN(REPLACE(?templateMotifCigarP37095MF_0050472, CONCAT('^(?:-*[^-]){', STR(((207 - ?templateMotifSequenceMatchBeginPositionP3709573) + 1)), '}'), '')))), '[a-z]', '')) AS ?step184) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37095MF_0050474, 1, (STRLEN(?targetMotifMatchCigarP37095MF_0050474) - STRLEN(REPLACE(?targetMotifMatchCigarP37095MF_0050474, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step184), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37095MF_0050474, 1, (STRLEN(?targetMotifMatchCigarP37095MF_0050474) - STRLEN(REPLACE(?targetMotifMatchCigarP37095MF_0050474, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step184), '}'), '')))), '[^-]', ''))) AS ?step285) . BIND(((?step285 + ?targetMotifMatchRegionMatchBeginPositionMF_0050475) - 1) AS ?thisPositionOn15) . BIND(?thisPositionOn15 AS ?thisPositionOn16) . BIND(?this AS ?pfs1t86) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfsb13) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfse14) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn15, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_00504a12')) AS ?annotation12) . BIND(?this AS ?pfs11) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch91 faldo:location ?templateMotifSequenceMatchRegionP3709592 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP3709594 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37095MF_0050487 . ?templateMotifSequenceMatchRegionP3709592 faldo:begin ?templateMotifSequenceMatchBeginP3709593 . ?templateMotifSequenceMatchBeginP3709593 faldo:position ?templateMotifSequenceMatchBeginPositionP3709588 ; faldo:reference isoform:P37095-1 . ?templateMotifSequenceProfileAlignmentOperationP3709594 edam:has_input signature:MF_00504 ; rdf:type edam:operation_0300 . ?targetMotifMatch95 faldo:location ?targetMotifMatchRegionMatch96 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0050498 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37095MF_0050489 . ?targetMotifMatchRegionMatch96 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0050497 . ?targetMotifMatchRegionMatchBeginMF_0050497 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0050490 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0050498 edam:has_input signature:MF_00504 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37095MF_0050487, 1, (STRLEN(?templateMotifCigarP37095MF_0050487) - STRLEN(REPLACE(?templateMotifCigarP37095MF_0050487, CONCAT('^(?:-*[^-]){', STR(((281 - ?templateMotifSequenceMatchBeginPositionP3709588) + 1)), '}'), '')))), '[a-z]', '')) AS ?step199) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37095MF_0050489, 1, (STRLEN(?targetMotifMatchCigarP37095MF_0050489) - STRLEN(REPLACE(?targetMotifMatchCigarP37095MF_0050489, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step199), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37095MF_0050489, 1, (STRLEN(?targetMotifMatchCigarP37095MF_0050489) - STRLEN(REPLACE(?targetMotifMatchCigarP37095MF_0050489, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step199), '}'), '')))), '[^-]', ''))) AS ?step2100) . BIND(((?step2100 + ?targetMotifMatchRegionMatchBeginPositionMF_0050490) - 1) AS ?thisPositionOn21) . BIND(?thisPositionOn21 AS ?thisPositionOn22) . BIND(?this AS ?pfs1t101) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn21))) AS ?pfsb19) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfse20) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn21, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_00504a18')) AS ?annotation18) . BIND(?this AS ?pfs17) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch106 faldo:location ?templateMotifSequenceMatchRegionP37095107 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37095109 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37095MF_00504102 . ?templateMotifSequenceMatchRegionP37095107 faldo:begin ?templateMotifSequenceMatchBeginP37095108 . ?templateMotifSequenceMatchBeginP37095108 faldo:position ?templateMotifSequenceMatchBeginPositionP37095103 ; faldo:reference isoform:P37095-1 . ?templateMotifSequenceProfileAlignmentOperationP37095109 edam:has_input signature:MF_00504 ; rdf:type edam:operation_0300 . ?targetMotifMatch110 faldo:location ?targetMotifMatchRegionMatch111 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00504113 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37095MF_00504104 . ?targetMotifMatchRegionMatch111 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00504112 . ?targetMotifMatchRegionMatchBeginMF_00504112 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00504105 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00504113 edam:has_input signature:MF_00504 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37095MF_00504102, 1, (STRLEN(?templateMotifCigarP37095MF_00504102) - STRLEN(REPLACE(?templateMotifCigarP37095MF_00504102, CONCAT('^(?:-*[^-]){', STR(((195 - ?templateMotifSequenceMatchBeginPositionP37095103) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1114) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37095MF_00504104, 1, (STRLEN(?targetMotifMatchCigarP37095MF_00504104) - STRLEN(REPLACE(?targetMotifMatchCigarP37095MF_00504104, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1114), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37095MF_00504104, 1, (STRLEN(?targetMotifMatchCigarP37095MF_00504104) - STRLEN(REPLACE(?targetMotifMatchCigarP37095MF_00504104, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1114), '}'), '')))), '[^-]', ''))) AS ?step2115) . BIND(((?step2115 + ?targetMotifMatchRegionMatchBeginPositionMF_00504105) - 1) AS ?thisPositionOn28) . BIND(?thisPositionOn28 AS ?thisPositionOn29) . BIND(?this AS ?pfs1t116) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfsb25) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn29))) AS ?pfse26) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn28, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_00504a24')) AS ?annotation24) . BIND(?this AS ?pfs23) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch121 faldo:location ?templateMotifSequenceMatchRegionP37095122 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37095124 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37095MF_00504117 . ?templateMotifSequenceMatchRegionP37095122 faldo:begin ?templateMotifSequenceMatchBeginP37095123 . ?templateMotifSequenceMatchBeginP37095123 faldo:position ?templateMotifSequenceMatchBeginPositionP37095118 ; faldo:reference isoform:P37095-1 . ?templateMotifSequenceProfileAlignmentOperationP37095124 edam:has_input signature:MF_00504 ; rdf:type edam:operation_0300 . ?targetMotifMatch125 faldo:location ?targetMotifMatchRegionMatch126 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00504128 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37095MF_00504119 . ?targetMotifMatchRegionMatch126 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00504127 . ?targetMotifMatchRegionMatchBeginMF_00504127 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00504120 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00504128 edam:has_input signature:MF_00504 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37095MF_00504117, 1, (STRLEN(?templateMotifCigarP37095MF_00504117) - STRLEN(REPLACE(?templateMotifCigarP37095MF_00504117, CONCAT('^(?:-*[^-]){', STR(((200 - ?templateMotifSequenceMatchBeginPositionP37095118) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1129) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37095MF_00504119, 1, (STRLEN(?targetMotifMatchCigarP37095MF_00504119) - STRLEN(REPLACE(?targetMotifMatchCigarP37095MF_00504119, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1129), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37095MF_00504119, 1, (STRLEN(?targetMotifMatchCigarP37095MF_00504119) - STRLEN(REPLACE(?targetMotifMatchCigarP37095MF_00504119, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1129), '}'), '')))), '[^-]', ''))) AS ?step2130) . BIND(((?step2130 + ?targetMotifMatchRegionMatchBeginPositionMF_00504120) - 1) AS ?thisPositionOn35) . BIND(?thisPositionOn35 AS ?thisPositionOn36) . BIND(?this AS ?pfs1t131) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn35))) AS ?pfsb32) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn36))) AS ?pfse33) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn35, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_00504a31')) AS ?annotation31) . BIND(?this AS ?pfs30) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch136 faldo:location ?templateMotifSequenceMatchRegionP37095137 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37095139 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37095MF_00504132 . ?templateMotifSequenceMatchRegionP37095137 faldo:begin ?templateMotifSequenceMatchBeginP37095138 . ?templateMotifSequenceMatchBeginP37095138 faldo:position ?templateMotifSequenceMatchBeginPositionP37095133 ; faldo:reference isoform:P37095-1 . ?templateMotifSequenceProfileAlignmentOperationP37095139 edam:has_input signature:MF_00504 ; rdf:type edam:operation_0300 . ?targetMotifMatch140 faldo:location ?targetMotifMatchRegionMatch141 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00504143 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37095MF_00504134 . ?targetMotifMatchRegionMatch141 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00504142 . ?targetMotifMatchRegionMatchBeginMF_00504142 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00504135 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00504143 edam:has_input signature:MF_00504 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37095MF_00504132, 1, (STRLEN(?templateMotifCigarP37095MF_00504132) - STRLEN(REPLACE(?templateMotifCigarP37095MF_00504132, CONCAT('^(?:-*[^-]){', STR(((200 - ?templateMotifSequenceMatchBeginPositionP37095133) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1144) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37095MF_00504134, 1, (STRLEN(?targetMotifMatchCigarP37095MF_00504134) - STRLEN(REPLACE(?targetMotifMatchCigarP37095MF_00504134, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1144), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37095MF_00504134, 1, (STRLEN(?targetMotifMatchCigarP37095MF_00504134) - STRLEN(REPLACE(?targetMotifMatchCigarP37095MF_00504134, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1144), '}'), '')))), '[^-]', ''))) AS ?step2145) . BIND(((?step2145 + ?targetMotifMatchRegionMatchBeginPositionMF_00504135) - 1) AS ?thisPositionOn42) . BIND(?thisPositionOn42 AS ?thisPositionOn43) . BIND(?this AS ?pfs1t146) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn42))) AS ?pfsb39) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn43))) AS ?pfse40) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn42, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_00504a38')) AS ?annotation38) . BIND(?this AS ?pfs37) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch151 faldo:location ?templateMotifSequenceMatchRegionP37095152 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37095154 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37095MF_00504147 . ?templateMotifSequenceMatchRegionP37095152 faldo:begin ?templateMotifSequenceMatchBeginP37095153 . ?templateMotifSequenceMatchBeginP37095153 faldo:position ?templateMotifSequenceMatchBeginPositionP37095148 ; faldo:reference isoform:P37095-1 . ?templateMotifSequenceProfileAlignmentOperationP37095154 edam:has_input signature:MF_00504 ; rdf:type edam:operation_0300 . ?targetMotifMatch155 faldo:location ?targetMotifMatchRegionMatch156 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00504158 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37095MF_00504149 . ?targetMotifMatchRegionMatch156 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00504157 . ?targetMotifMatchRegionMatchBeginMF_00504157 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00504150 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00504158 edam:has_input signature:MF_00504 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37095MF_00504147, 1, (STRLEN(?templateMotifCigarP37095MF_00504147) - STRLEN(REPLACE(?templateMotifCigarP37095MF_00504147, CONCAT('^(?:-*[^-]){', STR(((218 - ?templateMotifSequenceMatchBeginPositionP37095148) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1159) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37095MF_00504149, 1, (STRLEN(?targetMotifMatchCigarP37095MF_00504149) - STRLEN(REPLACE(?targetMotifMatchCigarP37095MF_00504149, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1159), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37095MF_00504149, 1, (STRLEN(?targetMotifMatchCigarP37095MF_00504149) - STRLEN(REPLACE(?targetMotifMatchCigarP37095MF_00504149, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1159), '}'), '')))), '[^-]', ''))) AS ?step2160) . BIND(((?step2160 + ?targetMotifMatchRegionMatchBeginPositionMF_00504150) - 1) AS ?thisPositionOn49) . BIND(?thisPositionOn49 AS ?thisPositionOn50) . BIND(?this AS ?pfs1t161) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn49))) AS ?pfsb46) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn50))) AS ?pfse47) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn49, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_00504a45')) AS ?annotation45) . BIND(?this AS ?pfs44) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch166 faldo:location ?templateMotifSequenceMatchRegionP37095167 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37095169 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37095MF_00504162 . ?templateMotifSequenceMatchRegionP37095167 faldo:begin ?templateMotifSequenceMatchBeginP37095168 . ?templateMotifSequenceMatchBeginP37095168 faldo:position ?templateMotifSequenceMatchBeginPositionP37095163 ; faldo:reference isoform:P37095-1 . ?templateMotifSequenceProfileAlignmentOperationP37095169 edam:has_input signature:MF_00504 ; rdf:type edam:operation_0300 . ?targetMotifMatch170 faldo:location ?targetMotifMatchRegionMatch171 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00504173 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37095MF_00504164 . ?targetMotifMatchRegionMatch171 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00504172 . ?targetMotifMatchRegionMatchBeginMF_00504172 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00504165 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00504173 edam:has_input signature:MF_00504 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37095MF_00504162, 1, (STRLEN(?templateMotifCigarP37095MF_00504162) - STRLEN(REPLACE(?templateMotifCigarP37095MF_00504162, CONCAT('^(?:-*[^-]){', STR(((277 - ?templateMotifSequenceMatchBeginPositionP37095163) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1174) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37095MF_00504164, 1, (STRLEN(?targetMotifMatchCigarP37095MF_00504164) - STRLEN(REPLACE(?targetMotifMatchCigarP37095MF_00504164, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1174), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37095MF_00504164, 1, (STRLEN(?targetMotifMatchCigarP37095MF_00504164) - STRLEN(REPLACE(?targetMotifMatchCigarP37095MF_00504164, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1174), '}'), '')))), '[^-]', ''))) AS ?step2175) . BIND(((?step2175 + ?targetMotifMatchRegionMatchBeginPositionMF_00504165) - 1) AS ?thisPositionOn56) . BIND(?thisPositionOn56 AS ?thisPositionOn57) . BIND(?this AS ?pfs1t176) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn56))) AS ?pfsb53) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn57))) AS ?pfse54) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn56, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_00504a52')) AS ?annotation52) . BIND(?this AS ?pfs51) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch181 faldo:location ?templateMotifSequenceMatchRegionP37095182 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37095184 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37095MF_00504177 . ?templateMotifSequenceMatchRegionP37095182 faldo:begin ?templateMotifSequenceMatchBeginP37095183 . ?templateMotifSequenceMatchBeginP37095183 faldo:position ?templateMotifSequenceMatchBeginPositionP37095178 ; faldo:reference isoform:P37095-1 . ?templateMotifSequenceProfileAlignmentOperationP37095184 edam:has_input signature:MF_00504 ; rdf:type edam:operation_0300 . ?targetMotifMatch185 faldo:location ?targetMotifMatchRegionMatch186 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00504188 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37095MF_00504179 . ?targetMotifMatchRegionMatch186 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00504187 . ?targetMotifMatchRegionMatchBeginMF_00504187 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00504180 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00504188 edam:has_input signature:MF_00504 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37095MF_00504177, 1, (STRLEN(?templateMotifCigarP37095MF_00504177) - STRLEN(REPLACE(?templateMotifCigarP37095MF_00504177, CONCAT('^(?:-*[^-]){', STR(((279 - ?templateMotifSequenceMatchBeginPositionP37095178) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1189) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37095MF_00504179, 1, (STRLEN(?targetMotifMatchCigarP37095MF_00504179) - STRLEN(REPLACE(?targetMotifMatchCigarP37095MF_00504179, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1189), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37095MF_00504179, 1, (STRLEN(?targetMotifMatchCigarP37095MF_00504179) - STRLEN(REPLACE(?targetMotifMatchCigarP37095MF_00504179, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1189), '}'), '')))), '[^-]', ''))) AS ?step2190) . BIND(((?step2190 + ?targetMotifMatchRegionMatchBeginPositionMF_00504180) - 1) AS ?thisPositionOn63) . BIND(?thisPositionOn63 AS ?thisPositionOn64) . BIND(?this AS ?pfs1t191) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn63))) AS ?pfsb60) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn64))) AS ?pfse61) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn63, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_00504a59')) AS ?annotation59) . BIND(?this AS ?pfs58) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch196 faldo:location ?templateMotifSequenceMatchRegionP37095197 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP37095199 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP37095MF_00504192 . ?templateMotifSequenceMatchRegionP37095197 faldo:begin ?templateMotifSequenceMatchBeginP37095198 . ?templateMotifSequenceMatchBeginP37095198 faldo:position ?templateMotifSequenceMatchBeginPositionP37095193 ; faldo:reference isoform:P37095-1 . ?templateMotifSequenceProfileAlignmentOperationP37095199 edam:has_input signature:MF_00504 ; rdf:type edam:operation_0300 . ?targetMotifMatch200 faldo:location ?targetMotifMatchRegionMatch201 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00504203 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP37095MF_00504194 . ?targetMotifMatchRegionMatch201 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00504202 . ?targetMotifMatchRegionMatchBeginMF_00504202 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00504195 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00504203 edam:has_input signature:MF_00504 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP37095MF_00504192, 1, (STRLEN(?templateMotifCigarP37095MF_00504192) - STRLEN(REPLACE(?templateMotifCigarP37095MF_00504192, CONCAT('^(?:-*[^-]){', STR(((279 - ?templateMotifSequenceMatchBeginPositionP37095193) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1204) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP37095MF_00504194, 1, (STRLEN(?targetMotifMatchCigarP37095MF_00504194) - STRLEN(REPLACE(?targetMotifMatchCigarP37095MF_00504194, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1204), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP37095MF_00504194, 1, (STRLEN(?targetMotifMatchCigarP37095MF_00504194) - STRLEN(REPLACE(?targetMotifMatchCigarP37095MF_00504194, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1204), '}'), '')))), '[^-]', ''))) AS ?step2205) . BIND(((?step2205 + ?targetMotifMatchRegionMatchBeginPositionMF_00504195) - 1) AS ?thisPositionOn70) . BIND(?thisPositionOn70 AS ?thisPositionOn71) . BIND(?this AS ?pfs1t206) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn70))) AS ?pfsb67) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn71))) AS ?pfse68) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn70, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_00504a66')) AS ?annotation66) . BIND(?this AS ?pfs65) . } }