CONSTRUCT { _:226979 up:source unirule:MF_00581 . _:226980 up:source unirule:MF_00581 . _:226981 up:source unirule:MF_00581 . _:226982 up:source unirule:MF_00581 . _:226983 up:source unirule:MF_00581 . _:226984 up:source unirule:MF_00581 . _:226985 up:source unirule:MF_00581 . _:226986 up:source unirule:MF_00581 . _:226987 up:source unirule:MF_00581 . _:226988 up:source unirule:MF_00581 . _:226989 up:source unirule:MF_00581 . _:226990 up:source unirule:MF_00581 . _:226991 up:source unirule:MF_00581 . _:226992 up:source unirule:MF_00581 . _:226993 up:source unirule:MF_00581 . _:226994 up:source unirule:MF_00581 . _:226995 up:source unirule:MF_00581 . _:226996 up:source unirule:MF_00581 . _:226997 up:source unirule:MF_00581 . _:226998 up:source unirule:MF_00581 . _:226999 up:source unirule:MF_00581 . _:227000 up:source unirule:MF_00581 . _:227001 up:source unirule:MF_00581 . _:227002 up:source unirule:MF_00581 . _:227003 up:source unirule:MF_00581 . _:227004 up:source unirule:MF_00581 . _:227005 up:source unirule:MF_00581 . _:227006 up:source unirule:MF_00581 . _:227007 up:source unirule:MF_00581 . _:227008 up:source unirule:MF_00581 . _:227009 up:source unirule:MF_00581 . _:227010 up:source unirule:MF_00581 . _:227011 up:source unirule:MF_00581 . _:227012 up:source unirule:MF_00581 . ?this up:alternativeName ?name1 ; up:annotation ?annotation3 , ?annotation5 , ?annotation6 , ?annotation7 , ?annotation9 ; up:classifiedWith GO:0004055 , GO:0005524 , GO:0005737 , GO:0006526 , keyword:28 , keyword:436 , keyword:547 , keyword:55 , keyword:67 , keyword:963 ; up:recommendedName ?name0 . ?name0 up:ecName '6.3.4.5' ; up:fullName 'Argininosuccinate synthase' ; rdf:type up:Structured_Name . ?name1 up:fullName 'Citrulline--aspartate ligase' ; rdf:type up:Structured_Name . ?gene2 skos:prefLabel 'argG' . ?annotation3 up:activity ?activity4 ; rdf:type up:Catalytic_Activity_Annotation . ?activity4 up:catalyticActivity <http://rdf.rhea-db.org/10932>; up:enzymeClass <http://purl.uniprot.org/enzyme/6.3.4.5>. ?annotation5 a up:Pathway_Annotation ; rdfs:comment 'Amino-acid biosynthesis; L-arginine biosynthesis; L-arginine from L-ornithine and carbamoyl phosphate: step 2/3.' . ?annotation6 a up:Subunit_Annotation ; rdfs:comment 'Homotetramer.' . ?annotation7 a up:Subcellular_Location_Annotation . ?annotation7li8 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?annotation9 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the argininosuccinate synthase family. Type 2 subfamily.' . ?pfs10 up:annotation ?annotation11 . ?annotation11 faldo:begin ?pfsb12 ; faldo:end ?pfse13 ; up:ligand ?ligand14 ; rdf:type up:Binding_Site_Annotation . ?pfsb12 faldo:position ?thisPositionOn15 ; rdf:type faldo:ExactPosition . ?pfse13 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?ligand14 rdfs:subClassOf chebi:30616 . ?pfs17 up:annotation ?annotation18 . ?annotation18 faldo:begin ?pfsb19 ; faldo:end ?pfse20 ; up:ligand ?ligand21 ; rdf:type up:Binding_Site_Annotation . ?pfsb19 faldo:position ?thisPositionOn22 ; rdf:type faldo:ExactPosition . ?pfse20 faldo:position ?thisPositionOn23 ; rdf:type faldo:ExactPosition . ?ligand21 rdfs:subClassOf chebi:30616 . ?pfs24 up:annotation ?annotation25 . ?annotation25 faldo:begin ?pfsb26 ; faldo:end ?pfse27 ; up:ligand ?ligand28 ; rdf:type up:Binding_Site_Annotation . ?pfsb26 faldo:position ?thisPositionOn29 ; rdf:type faldo:ExactPosition . ?pfse27 faldo:position ?thisPositionOn30 ; rdf:type faldo:ExactPosition . ?ligand28 rdfs:subClassOf chebi:57743 . ?pfs31 up:annotation ?annotation32 . ?annotation32 faldo:begin ?pfsb33 ; faldo:end ?pfse34 ; up:ligand ?ligand35 ; rdf:type up:Binding_Site_Annotation . ?pfsb33 faldo:position ?thisPositionOn36 ; rdf:type faldo:ExactPosition . ?pfse34 faldo:position ?thisPositionOn37 ; rdf:type faldo:ExactPosition . ?ligand35 rdfs:subClassOf chebi:30616 . ?pfs38 up:annotation ?annotation39 . ?annotation39 faldo:begin ?pfsb40 ; faldo:end ?pfse41 ; up:ligand ?ligand42 ; rdf:type up:Binding_Site_Annotation . ?pfsb40 faldo:position ?thisPositionOn43 ; rdf:type faldo:ExactPosition . ?pfse41 faldo:position ?thisPositionOn44 ; rdf:type faldo:ExactPosition . ?ligand42 rdfs:subClassOf chebi:30616 . ?pfs45 up:annotation ?annotation46 . ?annotation46 faldo:begin ?pfsb47 ; faldo:end ?pfse48 ; up:ligand ?ligand49 ; rdf:type up:Binding_Site_Annotation . ?pfsb47 faldo:position ?thisPositionOn50 ; rdf:type faldo:ExactPosition . ?pfse48 faldo:position ?thisPositionOn51 ; rdf:type faldo:ExactPosition . ?ligand49 rdfs:subClassOf chebi:29991 . ?pfs52 up:annotation ?annotation53 . ?annotation53 faldo:begin ?pfsb54 ; faldo:end ?pfse55 ; up:ligand ?ligand56 ; rdf:type up:Binding_Site_Annotation . ?pfsb54 faldo:position ?thisPositionOn57 ; rdf:type faldo:ExactPosition . ?pfse55 faldo:position ?thisPositionOn58 ; rdf:type faldo:ExactPosition . ?ligand56 rdfs:subClassOf chebi:57743 . ?pfs59 up:annotation ?annotation60 . ?annotation60 faldo:begin ?pfsb61 ; faldo:end ?pfse62 ; up:ligand ?ligand63 ; rdf:type up:Binding_Site_Annotation . ?pfsb61 faldo:position ?thisPositionOn64 ; rdf:type faldo:ExactPosition . ?pfse62 faldo:position ?thisPositionOn65 ; rdf:type faldo:ExactPosition . ?ligand63 rdfs:subClassOf chebi:29991 . ?pfs66 up:annotation ?annotation67 . ?annotation67 faldo:begin ?pfsb68 ; faldo:end ?pfse69 ; up:ligand ?ligand70 ; rdf:type up:Binding_Site_Annotation . ?pfsb68 faldo:position ?thisPositionOn71 ; rdf:type faldo:ExactPosition . ?pfse69 faldo:position ?thisPositionOn72 ; rdf:type faldo:ExactPosition . ?ligand70 rdfs:subClassOf chebi:30616 . ?pfs73 up:annotation ?annotation74 . ?annotation74 faldo:begin ?pfsb75 ; faldo:end ?pfse76 ; up:ligand ?ligand77 ; rdf:type up:Binding_Site_Annotation . ?pfsb75 faldo:position ?thisPositionOn78 ; rdf:type faldo:ExactPosition . ?pfse76 faldo:position ?thisPositionOn79 ; rdf:type faldo:ExactPosition . ?ligand77 rdfs:subClassOf chebi:29991 . ?pfs80 up:annotation ?annotation81 . ?annotation81 faldo:begin ?pfsb82 ; faldo:end ?pfse83 ; up:ligand ?ligand84 ; rdf:type up:Binding_Site_Annotation . ?pfsb82 faldo:position ?thisPositionOn85 ; rdf:type faldo:ExactPosition . ?pfse83 faldo:position ?thisPositionOn86 ; rdf:type faldo:ExactPosition . ?ligand84 rdfs:subClassOf chebi:57743 . ?pfs87 up:annotation ?annotation88 . ?annotation88 faldo:begin ?pfsb89 ; faldo:end ?pfse90 ; up:ligand ?ligand91 ; rdf:type up:Binding_Site_Annotation . ?pfsb89 faldo:position ?thisPositionOn92 ; rdf:type faldo:ExactPosition . ?pfse90 faldo:position ?thisPositionOn93 ; rdf:type faldo:ExactPosition . ?ligand91 rdfs:subClassOf chebi:57743 . ?pfs94 up:annotation ?annotation95 . ?annotation95 faldo:begin ?pfsb96 ; faldo:end ?pfse97 ; up:ligand ?ligand98 ; rdf:type up:Binding_Site_Annotation . ?pfsb96 faldo:position ?thisPositionOn99 ; rdf:type faldo:ExactPosition . ?pfse97 faldo:position ?thisPositionOn100 ; rdf:type faldo:ExactPosition . ?ligand98 rdfs:subClassOf chebi:30616 . ?pfs101 up:annotation ?annotation102 . ?annotation102 faldo:begin ?pfsb103 ; faldo:end ?pfse104 ; up:ligand ?ligand105 ; rdf:type up:Binding_Site_Annotation . ?pfsb103 faldo:position ?thisPositionOn106 ; rdf:type faldo:ExactPosition . ?pfse104 faldo:position ?thisPositionOn107 ; rdf:type faldo:ExactPosition . ?ligand105 rdfs:subClassOf chebi:57743 . ?pfs108 up:annotation ?annotation109 . ?annotation109 faldo:begin ?pfsb110 ; faldo:end ?pfse111 ; up:ligand ?ligand112 ; rdf:type up:Binding_Site_Annotation . ?pfsb110 faldo:position ?thisPositionOn113 ; rdf:type faldo:ExactPosition . ?pfse111 faldo:position ?thisPositionOn114 ; rdf:type faldo:ExactPosition . ?ligand112 rdfs:subClassOf chebi:57743 . ?pfs115 up:annotation ?annotation116 . ?annotation116 faldo:begin ?pfsb117 ; faldo:end ?pfse118 ; up:ligand ?ligand119 ; rdf:type up:Binding_Site_Annotation . ?pfsb117 faldo:position ?thisPositionOn120 ; rdf:type faldo:ExactPosition . ?pfse118 faldo:position ?thisPositionOn121 ; rdf:type faldo:ExactPosition . ?ligand119 rdfs:subClassOf chebi:57743 . _:227013 a rdf:Statement ; up:attribution _:226979 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:227014 a rdf:Statement ; up:attribution _:226980 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name1 . _:227015 a rdf:Statement ; up:attribution _:226981 ; rdf:subject ?gene2 ; rdf:predicate up:encodedBy ; rdf:object ?gene2 . _:227016 a rdf:Statement ; up:attribution _:226982 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:227017 a rdf:Statement ; up:attribution _:226983 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:227018 a rdf:Statement ; up:attribution _:226984 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:227019 a rdf:Statement ; up:attribution _:226985 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:227020 a rdf:Statement ; up:attribution _:226986 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation9 . _:227021 a rdf:Statement ; up:attribution _:226987 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:963 . _:227022 a rdf:Statement ; up:attribution _:226988 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:28 . _:227023 a rdf:Statement ; up:attribution _:226989 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:55 . _:227024 a rdf:Statement ; up:attribution _:226990 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:436 . _:227025 a rdf:Statement ; up:attribution _:226991 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:67 . _:227026 a rdf:Statement ; up:attribution _:226992 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:547 . _:227027 a rdf:Statement ; up:attribution _:226993 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0004055 . _:227028 a rdf:Statement ; up:attribution _:226994 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005524 . _:227029 a rdf:Statement ; up:attribution _:226995 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006526 . _:227030 a rdf:Statement ; up:attribution _:226996 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005737 . _:227031 a rdf:Statement ; up:source unirule:MF_00581 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:227032 a rdf:Statement ; up:attribution _:226997 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:227033 a rdf:Statement ; up:source unirule:MF_00581 ; rdf:subject ?pfs17 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:227034 a rdf:Statement ; up:attribution _:226998 ; rdf:subject ?pfs17 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:227035 a rdf:Statement ; up:source unirule:MF_00581 ; rdf:subject ?pfs24 ; rdf:predicate up:annotation ; rdf:object ?annotation25 . _:227036 a rdf:Statement ; up:attribution _:226999 ; rdf:subject ?pfs24 ; rdf:predicate up:annotation ; rdf:object ?annotation25 . _:227037 a rdf:Statement ; up:source unirule:MF_00581 ; rdf:subject ?pfs31 ; rdf:predicate up:annotation ; rdf:object ?annotation32 . _:227038 a rdf:Statement ; up:attribution _:227000 ; rdf:subject ?pfs31 ; rdf:predicate up:annotation ; rdf:object ?annotation32 . _:227039 a rdf:Statement ; up:source unirule:MF_00581 ; rdf:subject ?pfs38 ; rdf:predicate up:annotation ; rdf:object ?annotation39 . _:227040 a rdf:Statement ; up:attribution _:227001 ; rdf:subject ?pfs38 ; rdf:predicate up:annotation ; rdf:object ?annotation39 . _:227041 a rdf:Statement ; up:source unirule:MF_00581 ; rdf:subject ?pfs45 ; rdf:predicate up:annotation ; rdf:object ?annotation46 . _:227042 a rdf:Statement ; up:attribution _:227002 ; rdf:subject ?pfs45 ; rdf:predicate up:annotation ; rdf:object ?annotation46 . _:227043 a rdf:Statement ; up:source unirule:MF_00581 ; rdf:subject ?pfs52 ; rdf:predicate up:annotation ; rdf:object ?annotation53 . _:227044 a rdf:Statement ; up:attribution _:227003 ; rdf:subject ?pfs52 ; rdf:predicate up:annotation ; rdf:object ?annotation53 . _:227045 a rdf:Statement ; up:source unirule:MF_00581 ; rdf:subject ?pfs59 ; rdf:predicate up:annotation ; rdf:object ?annotation60 . _:227046 a rdf:Statement ; up:attribution _:227004 ; rdf:subject ?pfs59 ; rdf:predicate up:annotation ; rdf:object ?annotation60 . _:227047 a rdf:Statement ; up:source unirule:MF_00581 ; rdf:subject ?pfs66 ; rdf:predicate up:annotation ; rdf:object ?annotation67 . _:227048 a rdf:Statement ; up:attribution _:227005 ; rdf:subject ?pfs66 ; rdf:predicate up:annotation ; rdf:object ?annotation67 . _:227049 a rdf:Statement ; up:source unirule:MF_00581 ; rdf:subject ?pfs73 ; rdf:predicate up:annotation ; rdf:object ?annotation74 . _:227050 a rdf:Statement ; up:attribution _:227006 ; rdf:subject ?pfs73 ; rdf:predicate up:annotation ; rdf:object ?annotation74 . _:227051 a rdf:Statement ; up:source unirule:MF_00581 ; rdf:subject ?pfs80 ; rdf:predicate up:annotation ; rdf:object ?annotation81 . _:227052 a rdf:Statement ; up:attribution _:227007 ; rdf:subject ?pfs80 ; rdf:predicate up:annotation ; rdf:object ?annotation81 . _:227053 a rdf:Statement ; up:source unirule:MF_00581 ; rdf:subject ?pfs87 ; rdf:predicate up:annotation ; rdf:object ?annotation88 . _:227054 a rdf:Statement ; up:attribution _:227008 ; rdf:subject ?pfs87 ; rdf:predicate up:annotation ; rdf:object ?annotation88 . _:227055 a rdf:Statement ; up:source unirule:MF_00581 ; rdf:subject ?pfs94 ; rdf:predicate up:annotation ; rdf:object ?annotation95 . _:227056 a rdf:Statement ; up:attribution _:227009 ; rdf:subject ?pfs94 ; rdf:predicate up:annotation ; rdf:object ?annotation95 . _:227057 a rdf:Statement ; up:source unirule:MF_00581 ; rdf:subject ?pfs101 ; rdf:predicate up:annotation ; rdf:object ?annotation102 . _:227058 a rdf:Statement ; up:attribution _:227010 ; rdf:subject ?pfs101 ; rdf:predicate up:annotation ; rdf:object ?annotation102 . _:227059 a rdf:Statement ; up:source unirule:MF_00581 ; rdf:subject ?pfs108 ; rdf:predicate up:annotation ; rdf:object ?annotation109 . _:227060 a rdf:Statement ; up:attribution _:227011 ; rdf:subject ?pfs108 ; rdf:predicate up:annotation ; rdf:object ?annotation109 . _:227061 a rdf:Statement ; up:source unirule:MF_00581 ; rdf:subject ?pfs115 ; rdf:predicate up:annotation ; rdf:object ?annotation116 . _:227062 a rdf:Statement ; up:attribution _:227012 ; rdf:subject ?pfs115 ; rdf:predicate up:annotation ; rdf:object ?annotation116 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00581 #Rule MF_00581 Created by:? on:2005-02-28 Modified by:Catherine Rivoire on:2024-11-05 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00581 . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(URI(CONCAT(STR(?this), '#MF_00581a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_00581a1')) AS ?name1) . BIND(URI(CONCAT(STR(?this), '#MF_00581a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_00581a5')) AS ?annotation5) . BIND(URI(CONCAT(STR(?this), '#MF_00581a6')) AS ?annotation6) . BIND(URI(CONCAT(STR(?this), '#MF_00581a7')) AS ?annotation7) . BIND(URI(CONCAT(STR(?this), '#MF_00581a9')) AS ?annotation9) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch126 faldo:location ?templateMotifSequenceMatchRegionP0A6E4127 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6E4129 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6E4MF_00581122 . ?templateMotifSequenceMatchRegionP0A6E4127 faldo:begin ?templateMotifSequenceMatchBeginP0A6E4128 . ?templateMotifSequenceMatchBeginP0A6E4128 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6E4123 ; faldo:reference isoform:P0A6E4-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6E4129 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . ?targetMotifMatch130 faldo:location ?targetMotifMatchRegionMatch131 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00581133 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6E4MF_00581124 . ?targetMotifMatchRegionMatch131 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00581132 . ?targetMotifMatchRegionMatchBeginMF_00581132 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00581125 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00581133 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6E4MF_00581122, 1, (STRLEN(?templateMotifCigarP0A6E4MF_00581122) - STRLEN(REPLACE(?templateMotifCigarP0A6E4MF_00581122, CONCAT('^(?:-*[^-]){', STR(((17 - ?templateMotifSequenceMatchBeginPositionP0A6E4123) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1134) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581124, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581124) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581124, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1134), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581124, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581124) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581124, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1134), '}'), '')))), '[^-]', ''))) AS ?step2135) . BIND(((?step2135 + ?targetMotifMatchRegionMatchBeginPositionMF_00581125) - 1) AS ?thisPositionOn15) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6E4MF_00581122, 1, (STRLEN(?templateMotifCigarP0A6E4MF_00581122) - STRLEN(REPLACE(?templateMotifCigarP0A6E4MF_00581122, CONCAT('^(?:-*[^-]){', STR(((25 - ?templateMotifSequenceMatchBeginPositionP0A6E4123) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1136) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581124, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581124) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581124, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1136), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581124, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581124) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581124, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1136), '}'), '')))), '[^-]', ''))) AS ?step2137) . BIND(((?step2137 + ?targetMotifMatchRegionMatchBeginPositionMF_00581125) - 1) AS ?thisPositionOn16) . BIND(?this AS ?pfs1t138) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfsb12) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfse13) . FILTER ((BOUND(?thisPositionOn15) && BOUND(?thisPositionOn16))) . BIND(URI(CONCAT(STR(?this), '#MF_00581a11')) AS ?annotation11) . BIND(?this AS ?pfs10) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch143 faldo:location ?templateMotifSequenceMatchRegionP0A6E4144 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6E4146 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6E4MF_00581139 . ?templateMotifSequenceMatchRegionP0A6E4144 faldo:begin ?templateMotifSequenceMatchBeginP0A6E4145 . ?templateMotifSequenceMatchBeginP0A6E4145 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6E4140 ; faldo:reference isoform:P0A6E4-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6E4146 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . ?targetMotifMatch147 faldo:location ?targetMotifMatchRegionMatch148 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00581150 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6E4MF_00581141 . ?targetMotifMatchRegionMatch148 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00581149 . ?targetMotifMatchRegionMatchBeginMF_00581149 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00581142 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00581150 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6E4MF_00581139, 1, (STRLEN(?templateMotifCigarP0A6E4MF_00581139) - STRLEN(REPLACE(?templateMotifCigarP0A6E4MF_00581139, CONCAT('^(?:-*[^-]){', STR(((43 - ?templateMotifSequenceMatchBeginPositionP0A6E4140) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1151) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581141, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581141) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581141, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1151), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581141, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581141) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581141, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1151), '}'), '')))), '[^-]', ''))) AS ?step2152) . BIND(((?step2152 + ?targetMotifMatchRegionMatchBeginPositionMF_00581142) - 1) AS ?thisPositionOn22) . BIND(?thisPositionOn22 AS ?thisPositionOn23) . BIND(?this AS ?pfs1t153) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfsb19) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfse20) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn22, 1) = 'A')) . BIND(URI(CONCAT(STR(?this), '#MF_00581a18')) AS ?annotation18) . BIND(?this AS ?pfs17) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch158 faldo:location ?templateMotifSequenceMatchRegionP0A6E4159 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6E4161 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6E4MF_00581154 . ?templateMotifSequenceMatchRegionP0A6E4159 faldo:begin ?templateMotifSequenceMatchBeginP0A6E4160 . ?templateMotifSequenceMatchBeginP0A6E4160 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6E4155 ; faldo:reference isoform:P0A6E4-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6E4161 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . ?targetMotifMatch162 faldo:location ?targetMotifMatchRegionMatch163 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00581165 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6E4MF_00581156 . ?targetMotifMatchRegionMatch163 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00581164 . ?targetMotifMatchRegionMatchBeginMF_00581164 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00581157 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00581165 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6E4MF_00581154, 1, (STRLEN(?templateMotifCigarP0A6E4MF_00581154) - STRLEN(REPLACE(?templateMotifCigarP0A6E4MF_00581154, CONCAT('^(?:-*[^-]){', STR(((99 - ?templateMotifSequenceMatchBeginPositionP0A6E4155) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1166) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581156, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581156) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581156, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1166), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581156, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581156) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581156, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1166), '}'), '')))), '[^-]', ''))) AS ?step2167) . BIND(((?step2167 + ?targetMotifMatchRegionMatchBeginPositionMF_00581157) - 1) AS ?thisPositionOn29) . BIND(?thisPositionOn29 AS ?thisPositionOn30) . BIND(?this AS ?pfs1t168) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn29))) AS ?pfsb26) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn30))) AS ?pfse27) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn29, 1) = 'Y')) . BIND(URI(CONCAT(STR(?this), '#MF_00581a25')) AS ?annotation25) . BIND(?this AS ?pfs24) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch173 faldo:location ?templateMotifSequenceMatchRegionP0A6E4174 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6E4176 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6E4MF_00581169 . ?templateMotifSequenceMatchRegionP0A6E4174 faldo:begin ?templateMotifSequenceMatchBeginP0A6E4175 . ?templateMotifSequenceMatchBeginP0A6E4175 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6E4170 ; faldo:reference isoform:P0A6E4-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6E4176 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . ?targetMotifMatch177 faldo:location ?targetMotifMatchRegionMatch178 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00581180 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6E4MF_00581171 . ?targetMotifMatchRegionMatch178 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00581179 . ?targetMotifMatchRegionMatchBeginMF_00581179 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00581172 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00581180 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6E4MF_00581169, 1, (STRLEN(?templateMotifCigarP0A6E4MF_00581169) - STRLEN(REPLACE(?templateMotifCigarP0A6E4MF_00581169, CONCAT('^(?:-*[^-]){', STR(((129 - ?templateMotifSequenceMatchBeginPositionP0A6E4170) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1181) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581171, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581171) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581171, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1181), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581171, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581171) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581171, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1181), '}'), '')))), '[^-]', ''))) AS ?step2182) . BIND(((?step2182 + ?targetMotifMatchRegionMatchBeginPositionMF_00581172) - 1) AS ?thisPositionOn36) . BIND(?thisPositionOn36 AS ?thisPositionOn37) . BIND(?this AS ?pfs1t183) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn36))) AS ?pfsb33) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn37))) AS ?pfse34) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn36, 1) = 'G')) . BIND(URI(CONCAT(STR(?this), '#MF_00581a32')) AS ?annotation32) . BIND(?this AS ?pfs31) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch188 faldo:location ?templateMotifSequenceMatchRegionP0A6E4189 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6E4191 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6E4MF_00581184 . ?templateMotifSequenceMatchRegionP0A6E4189 faldo:begin ?templateMotifSequenceMatchBeginP0A6E4190 . ?templateMotifSequenceMatchBeginP0A6E4190 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6E4185 ; faldo:reference isoform:P0A6E4-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6E4191 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . ?targetMotifMatch192 faldo:location ?targetMotifMatchRegionMatch193 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00581195 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6E4MF_00581186 . ?targetMotifMatchRegionMatch193 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00581194 . ?targetMotifMatchRegionMatchBeginMF_00581194 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00581187 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00581195 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6E4MF_00581184, 1, (STRLEN(?templateMotifCigarP0A6E4MF_00581184) - STRLEN(REPLACE(?templateMotifCigarP0A6E4MF_00581184, CONCAT('^(?:-*[^-]){', STR(((131 - ?templateMotifSequenceMatchBeginPositionP0A6E4185) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1196) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581186, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581186) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581186, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1196), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581186, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581186) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581186, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1196), '}'), '')))), '[^-]', ''))) AS ?step2197) . BIND(((?step2197 + ?targetMotifMatchRegionMatchBeginPositionMF_00581187) - 1) AS ?thisPositionOn43) . BIND(?thisPositionOn43 AS ?thisPositionOn44) . BIND(?this AS ?pfs1t198) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn43))) AS ?pfsb40) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn44))) AS ?pfse41) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn43, 1) = 'T')) . BIND(URI(CONCAT(STR(?this), '#MF_00581a39')) AS ?annotation39) . BIND(?this AS ?pfs38) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch203 faldo:location ?templateMotifSequenceMatchRegionP0A6E4204 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6E4206 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6E4MF_00581199 . ?templateMotifSequenceMatchRegionP0A6E4204 faldo:begin ?templateMotifSequenceMatchBeginP0A6E4205 . ?templateMotifSequenceMatchBeginP0A6E4205 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6E4200 ; faldo:reference isoform:P0A6E4-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6E4206 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . ?targetMotifMatch207 faldo:location ?targetMotifMatchRegionMatch208 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00581210 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6E4MF_00581201 . ?targetMotifMatchRegionMatch208 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00581209 . ?targetMotifMatchRegionMatchBeginMF_00581209 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00581202 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00581210 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6E4MF_00581199, 1, (STRLEN(?templateMotifCigarP0A6E4MF_00581199) - STRLEN(REPLACE(?templateMotifCigarP0A6E4MF_00581199, CONCAT('^(?:-*[^-]){', STR(((131 - ?templateMotifSequenceMatchBeginPositionP0A6E4200) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1211) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581201, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581201) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581201, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1211), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581201, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581201) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581201, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1211), '}'), '')))), '[^-]', ''))) AS ?step2212) . BIND(((?step2212 + ?targetMotifMatchRegionMatchBeginPositionMF_00581202) - 1) AS ?thisPositionOn50) . BIND(?thisPositionOn50 AS ?thisPositionOn51) . BIND(?this AS ?pfs1t213) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn50))) AS ?pfsb47) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn51))) AS ?pfse48) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn50, 1) = 'T')) . BIND(URI(CONCAT(STR(?this), '#MF_00581a46')) AS ?annotation46) . BIND(?this AS ?pfs45) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch218 faldo:location ?templateMotifSequenceMatchRegionP0A6E4219 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6E4221 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6E4MF_00581214 . ?templateMotifSequenceMatchRegionP0A6E4219 faldo:begin ?templateMotifSequenceMatchBeginP0A6E4220 . ?templateMotifSequenceMatchBeginP0A6E4220 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6E4215 ; faldo:reference isoform:P0A6E4-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6E4221 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . ?targetMotifMatch222 faldo:location ?targetMotifMatchRegionMatch223 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00581225 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6E4MF_00581216 . ?targetMotifMatchRegionMatch223 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00581224 . ?targetMotifMatchRegionMatchBeginMF_00581224 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00581217 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00581225 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6E4MF_00581214, 1, (STRLEN(?templateMotifCigarP0A6E4MF_00581214) - STRLEN(REPLACE(?templateMotifCigarP0A6E4MF_00581214, CONCAT('^(?:-*[^-]){', STR(((135 - ?templateMotifSequenceMatchBeginPositionP0A6E4215) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1226) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581216, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581216) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581216, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1226), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581216, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581216) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581216, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1226), '}'), '')))), '[^-]', ''))) AS ?step2227) . BIND(((?step2227 + ?targetMotifMatchRegionMatchBeginPositionMF_00581217) - 1) AS ?thisPositionOn57) . BIND(?thisPositionOn57 AS ?thisPositionOn58) . BIND(?this AS ?pfs1t228) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn57))) AS ?pfsb54) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn58))) AS ?pfse55) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn57, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_00581a53')) AS ?annotation53) . BIND(?this AS ?pfs52) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch233 faldo:location ?templateMotifSequenceMatchRegionP0A6E4234 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6E4236 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6E4MF_00581229 . ?templateMotifSequenceMatchRegionP0A6E4234 faldo:begin ?templateMotifSequenceMatchBeginP0A6E4235 . ?templateMotifSequenceMatchBeginP0A6E4235 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6E4230 ; faldo:reference isoform:P0A6E4-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6E4236 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . ?targetMotifMatch237 faldo:location ?targetMotifMatchRegionMatch238 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00581240 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6E4MF_00581231 . ?targetMotifMatchRegionMatch238 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00581239 . ?targetMotifMatchRegionMatchBeginMF_00581239 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00581232 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00581240 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6E4MF_00581229, 1, (STRLEN(?templateMotifCigarP0A6E4MF_00581229) - STRLEN(REPLACE(?templateMotifCigarP0A6E4MF_00581229, CONCAT('^(?:-*[^-]){', STR(((135 - ?templateMotifSequenceMatchBeginPositionP0A6E4230) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1241) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581231, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581231) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581231, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1241), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581231, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581231) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581231, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1241), '}'), '')))), '[^-]', ''))) AS ?step2242) . BIND(((?step2242 + ?targetMotifMatchRegionMatchBeginPositionMF_00581232) - 1) AS ?thisPositionOn64) . BIND(?thisPositionOn64 AS ?thisPositionOn65) . BIND(?this AS ?pfs1t243) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn64))) AS ?pfsb61) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn65))) AS ?pfse62) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn64, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_00581a60')) AS ?annotation60) . BIND(?this AS ?pfs59) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch248 faldo:location ?templateMotifSequenceMatchRegionP0A6E4249 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6E4251 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6E4MF_00581244 . ?templateMotifSequenceMatchRegionP0A6E4249 faldo:begin ?templateMotifSequenceMatchBeginP0A6E4250 . ?templateMotifSequenceMatchBeginP0A6E4250 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6E4245 ; faldo:reference isoform:P0A6E4-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6E4251 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . ?targetMotifMatch252 faldo:location ?targetMotifMatchRegionMatch253 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00581255 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6E4MF_00581246 . ?targetMotifMatchRegionMatch253 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00581254 . ?targetMotifMatchRegionMatchBeginMF_00581254 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00581247 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00581255 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6E4MF_00581244, 1, (STRLEN(?templateMotifCigarP0A6E4MF_00581244) - STRLEN(REPLACE(?templateMotifCigarP0A6E4MF_00581244, CONCAT('^(?:-*[^-]){', STR(((136 - ?templateMotifSequenceMatchBeginPositionP0A6E4245) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1256) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581246, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581246) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581246, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1256), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581246, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581246) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581246, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1256), '}'), '')))), '[^-]', ''))) AS ?step2257) . BIND(((?step2257 + ?targetMotifMatchRegionMatchBeginPositionMF_00581247) - 1) AS ?thisPositionOn71) . BIND(?thisPositionOn71 AS ?thisPositionOn72) . BIND(?this AS ?pfs1t258) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn71))) AS ?pfsb68) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn72))) AS ?pfse69) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn71, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_00581a67')) AS ?annotation67) . BIND(?this AS ?pfs66) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch263 faldo:location ?templateMotifSequenceMatchRegionP0A6E4264 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6E4266 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6E4MF_00581259 . ?templateMotifSequenceMatchRegionP0A6E4264 faldo:begin ?templateMotifSequenceMatchBeginP0A6E4265 . ?templateMotifSequenceMatchBeginP0A6E4265 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6E4260 ; faldo:reference isoform:P0A6E4-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6E4266 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . ?targetMotifMatch267 faldo:location ?targetMotifMatchRegionMatch268 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00581270 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6E4MF_00581261 . ?targetMotifMatchRegionMatch268 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00581269 . ?targetMotifMatchRegionMatchBeginMF_00581269 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00581262 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00581270 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6E4MF_00581259, 1, (STRLEN(?templateMotifCigarP0A6E4MF_00581259) - STRLEN(REPLACE(?templateMotifCigarP0A6E4MF_00581259, CONCAT('^(?:-*[^-]){', STR(((136 - ?templateMotifSequenceMatchBeginPositionP0A6E4260) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1271) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581261, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581261) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581261, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1271), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581261, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581261) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581261, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1271), '}'), '')))), '[^-]', ''))) AS ?step2272) . BIND(((?step2272 + ?targetMotifMatchRegionMatchBeginPositionMF_00581262) - 1) AS ?thisPositionOn78) . BIND(?thisPositionOn78 AS ?thisPositionOn79) . BIND(?this AS ?pfs1t273) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn78))) AS ?pfsb75) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn79))) AS ?pfse76) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn78, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_00581a74')) AS ?annotation74) . BIND(?this AS ?pfs73) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch278 faldo:location ?templateMotifSequenceMatchRegionP0A6E4279 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6E4281 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6E4MF_00581274 . ?templateMotifSequenceMatchRegionP0A6E4279 faldo:begin ?templateMotifSequenceMatchBeginP0A6E4280 . ?templateMotifSequenceMatchBeginP0A6E4280 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6E4275 ; faldo:reference isoform:P0A6E4-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6E4281 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . ?targetMotifMatch282 faldo:location ?targetMotifMatchRegionMatch283 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00581285 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6E4MF_00581276 . ?targetMotifMatchRegionMatch283 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00581284 . ?targetMotifMatchRegionMatchBeginMF_00581284 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00581277 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00581285 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6E4MF_00581274, 1, (STRLEN(?templateMotifCigarP0A6E4MF_00581274) - STRLEN(REPLACE(?templateMotifCigarP0A6E4MF_00581274, CONCAT('^(?:-*[^-]){', STR(((139 - ?templateMotifSequenceMatchBeginPositionP0A6E4275) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1286) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581276, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581276) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581276, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1286), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581276, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581276) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581276, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1286), '}'), '')))), '[^-]', ''))) AS ?step2287) . BIND(((?step2287 + ?targetMotifMatchRegionMatchBeginPositionMF_00581277) - 1) AS ?thisPositionOn85) . BIND(?thisPositionOn85 AS ?thisPositionOn86) . BIND(?this AS ?pfs1t288) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn85))) AS ?pfsb82) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn86))) AS ?pfse83) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn85, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_00581a81')) AS ?annotation81) . BIND(?this AS ?pfs80) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch293 faldo:location ?templateMotifSequenceMatchRegionP0A6E4294 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6E4296 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6E4MF_00581289 . ?templateMotifSequenceMatchRegionP0A6E4294 faldo:begin ?templateMotifSequenceMatchBeginP0A6E4295 . ?templateMotifSequenceMatchBeginP0A6E4295 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6E4290 ; faldo:reference isoform:P0A6E4-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6E4296 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . ?targetMotifMatch297 faldo:location ?targetMotifMatchRegionMatch298 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00581300 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6E4MF_00581291 . ?targetMotifMatchRegionMatch298 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00581299 . ?targetMotifMatchRegionMatchBeginMF_00581299 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00581292 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00581300 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6E4MF_00581289, 1, (STRLEN(?templateMotifCigarP0A6E4MF_00581289) - STRLEN(REPLACE(?templateMotifCigarP0A6E4MF_00581289, CONCAT('^(?:-*[^-]){', STR(((192 - ?templateMotifSequenceMatchBeginPositionP0A6E4290) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1301) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581291, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581291) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581291, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1301), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581291, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581291) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581291, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1301), '}'), '')))), '[^-]', ''))) AS ?step2302) . BIND(((?step2302 + ?targetMotifMatchRegionMatchBeginPositionMF_00581292) - 1) AS ?thisPositionOn92) . BIND(?thisPositionOn92 AS ?thisPositionOn93) . BIND(?this AS ?pfs1t303) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn92))) AS ?pfsb89) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn93))) AS ?pfse90) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn92, 1) = 'S')) . BIND(URI(CONCAT(STR(?this), '#MF_00581a88')) AS ?annotation88) . BIND(?this AS ?pfs87) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch308 faldo:location ?templateMotifSequenceMatchRegionP0A6E4309 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6E4311 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6E4MF_00581304 . ?templateMotifSequenceMatchRegionP0A6E4309 faldo:begin ?templateMotifSequenceMatchBeginP0A6E4310 . ?templateMotifSequenceMatchBeginP0A6E4310 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6E4305 ; faldo:reference isoform:P0A6E4-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6E4311 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . ?targetMotifMatch312 faldo:location ?targetMotifMatchRegionMatch313 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00581315 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6E4MF_00581306 . ?targetMotifMatchRegionMatch313 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00581314 . ?targetMotifMatchRegionMatchBeginMF_00581314 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00581307 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00581315 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6E4MF_00581304, 1, (STRLEN(?templateMotifCigarP0A6E4MF_00581304) - STRLEN(REPLACE(?templateMotifCigarP0A6E4MF_00581304, CONCAT('^(?:-*[^-]){', STR(((194 - ?templateMotifSequenceMatchBeginPositionP0A6E4305) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1316) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581306, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581306) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581306, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1316), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581306, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581306) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581306, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1316), '}'), '')))), '[^-]', ''))) AS ?step2317) . BIND(((?step2317 + ?targetMotifMatchRegionMatchBeginPositionMF_00581307) - 1) AS ?thisPositionOn99) . BIND(?thisPositionOn99 AS ?thisPositionOn100) . BIND(?this AS ?pfs1t318) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn99))) AS ?pfsb96) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn100))) AS ?pfse97) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn99, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_00581a95')) AS ?annotation95) . BIND(?this AS ?pfs94) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch323 faldo:location ?templateMotifSequenceMatchRegionP0A6E4324 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6E4326 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6E4MF_00581319 . ?templateMotifSequenceMatchRegionP0A6E4324 faldo:begin ?templateMotifSequenceMatchBeginP0A6E4325 . ?templateMotifSequenceMatchBeginP0A6E4325 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6E4320 ; faldo:reference isoform:P0A6E4-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6E4326 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . ?targetMotifMatch327 faldo:location ?targetMotifMatchRegionMatch328 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00581330 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6E4MF_00581321 . ?targetMotifMatchRegionMatch328 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00581329 . ?targetMotifMatchRegionMatchBeginMF_00581329 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00581322 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00581330 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6E4MF_00581319, 1, (STRLEN(?templateMotifCigarP0A6E4MF_00581319) - STRLEN(REPLACE(?templateMotifCigarP0A6E4MF_00581319, CONCAT('^(?:-*[^-]){', STR(((201 - ?templateMotifSequenceMatchBeginPositionP0A6E4320) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1331) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581321, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581321) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581321, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1331), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581321, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581321) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581321, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1331), '}'), '')))), '[^-]', ''))) AS ?step2332) . BIND(((?step2332 + ?targetMotifMatchRegionMatchBeginPositionMF_00581322) - 1) AS ?thisPositionOn106) . BIND(?thisPositionOn106 AS ?thisPositionOn107) . BIND(?this AS ?pfs1t333) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn106))) AS ?pfsb103) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn107))) AS ?pfse104) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn106, 1) = 'T')) . BIND(URI(CONCAT(STR(?this), '#MF_00581a102')) AS ?annotation102) . BIND(?this AS ?pfs101) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch338 faldo:location ?templateMotifSequenceMatchRegionP0A6E4339 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6E4341 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6E4MF_00581334 . ?templateMotifSequenceMatchRegionP0A6E4339 faldo:begin ?templateMotifSequenceMatchBeginP0A6E4340 . ?templateMotifSequenceMatchBeginP0A6E4340 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6E4335 ; faldo:reference isoform:P0A6E4-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6E4341 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . ?targetMotifMatch342 faldo:location ?targetMotifMatchRegionMatch343 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00581345 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6E4MF_00581336 . ?targetMotifMatchRegionMatch343 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00581344 . ?targetMotifMatchRegionMatchBeginMF_00581344 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00581337 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00581345 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6E4MF_00581334, 1, (STRLEN(?templateMotifCigarP0A6E4MF_00581334) - STRLEN(REPLACE(?templateMotifCigarP0A6E4MF_00581334, CONCAT('^(?:-*[^-]){', STR(((203 - ?templateMotifSequenceMatchBeginPositionP0A6E4335) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1346) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581336, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581336) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581336, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1346), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581336, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581336) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581336, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1346), '}'), '')))), '[^-]', ''))) AS ?step2347) . BIND(((?step2347 + ?targetMotifMatchRegionMatchBeginPositionMF_00581337) - 1) AS ?thisPositionOn113) . BIND(?thisPositionOn113 AS ?thisPositionOn114) . BIND(?this AS ?pfs1t348) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn113))) AS ?pfsb110) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn114))) AS ?pfse111) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn113, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_00581a109')) AS ?annotation109) . BIND(?this AS ?pfs108) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch353 faldo:location ?templateMotifSequenceMatchRegionP0A6E4354 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6E4356 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6E4MF_00581349 . ?templateMotifSequenceMatchRegionP0A6E4354 faldo:begin ?templateMotifSequenceMatchBeginP0A6E4355 . ?templateMotifSequenceMatchBeginP0A6E4355 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6E4350 ; faldo:reference isoform:P0A6E4-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6E4356 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . ?targetMotifMatch357 faldo:location ?targetMotifMatchRegionMatch358 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00581360 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6E4MF_00581351 . ?targetMotifMatchRegionMatch358 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00581359 . ?targetMotifMatchRegionMatchBeginMF_00581359 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00581352 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00581360 edam:has_input signature:MF_00581 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6E4MF_00581349, 1, (STRLEN(?templateMotifCigarP0A6E4MF_00581349) - STRLEN(REPLACE(?templateMotifCigarP0A6E4MF_00581349, CONCAT('^(?:-*[^-]){', STR(((280 - ?templateMotifSequenceMatchBeginPositionP0A6E4350) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1361) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581351, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581351) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581351, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1361), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6E4MF_00581351, 1, (STRLEN(?targetMotifMatchCigarP0A6E4MF_00581351) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6E4MF_00581351, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1361), '}'), '')))), '[^-]', ''))) AS ?step2362) . BIND(((?step2362 + ?targetMotifMatchRegionMatchBeginPositionMF_00581352) - 1) AS ?thisPositionOn120) . BIND(?thisPositionOn120 AS ?thisPositionOn121) . BIND(?this AS ?pfs1t363) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn120))) AS ?pfsb117) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn121))) AS ?pfse118) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn120, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_00581a116')) AS ?annotation116) . BIND(?this AS ?pfs115) . } }