CONSTRUCT { _:307374 up:source unirule:MF_00861 . _:307375 up:source unirule:MF_00861 . _:307376 up:source unirule:MF_00861 . _:307377 up:source unirule:MF_00861 . _:307378 up:source unirule:MF_00861 . _:307379 up:source unirule:MF_00861 . _:307380 up:source unirule:MF_00861 . _:307381 up:source unirule:MF_00861 . _:307382 up:source unirule:MF_00861 . _:307383 up:source unirule:MF_00861 . _:307384 up:source unirule:MF_00861 . _:307385 up:source unirule:MF_00861 . _:307386 up:source unirule:MF_00861 . _:307387 up:source unirule:MF_00861 . _:307388 up:source unirule:MF_00861 . _:307389 up:source unirule:MF_00861 . _:307390 up:source unirule:MF_00861 . _:307391 up:source unirule:MF_00861 . _:307392 up:source unirule:MF_00861 . _:307393 up:source unirule:MF_00861 . _:307394 up:source unirule:MF_00861 . _:307395 up:source unirule:MF_00861 . _:307396 up:source unirule:MF_00861 . _:307397 up:source unirule:MF_00861 . _:307398 up:source unirule:MF_00861 . ?this up:annotation ?annotation1 , ?annotation3 , ?annotation4 , ?annotation5 , ?annotation6 ; up:classifiedWith GO:0008851 , GO:0009350 , GO:0031419 , GO:0046336 , keyword:170 , keyword:456 , keyword:846 . ?gene0 skos:prefLabel 'eutB' . ?annotation1 up:activity ?activity2 ; rdf:type up:Catalytic_Activity_Annotation . ?activity2 up:catalyticActivity <http://rdf.rhea-db.org/15313>; up:enzymeClass <http://purl.uniprot.org/enzyme/4.3.1.7>. ?annotation3 up:cofactor chebi:18408 ; rdf:type up:Cofactor_Annotation ; rdfs:comment 'Binds between the large and small subunits.' . ?annotation4 a up:Pathway_Annotation ; rdfs:comment 'Amine and polyamine degradation; ethanolamine degradation.' . ?annotation5 a up:Subunit_Annotation ; rdfs:comment 'The basic unit is a heterodimer which dimerizes to form tetramers. The heterotetramers trimerize; 6 large subunits form a core ring with 6 small subunits projecting outwards.' . ?annotation6 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the EutB family.' . ?case7 up:recommendedName ?name8 . ?name8 up:ecName '4.3.1.7' ; up:fullName 'Putative ethanolamine ammonia-lyase large subunit' ; up:shortName 'EAL large subunit' ; rdf:type up:Structured_Name . ?case9 up:classifiedWith GO:0031471 , keyword:1283 ; up:recommendedName ?name10 . ?name10 up:ecName '4.3.1.7' ; up:fullName 'Ethanolamine ammonia-lyase large subunit' ; up:shortName 'EAL large subunit' ; rdf:type up:Structured_Name . ?pfs11 up:annotation ?annotation12 . ?annotation12 faldo:begin ?pfsb13 ; faldo:end ?pfse14 ; up:ligand ?ligand15 ; rdf:type up:Binding_Site_Annotation . ?pfsb13 faldo:position ?thisPositionOn17 ; rdf:type faldo:ExactPosition . ?pfse14 faldo:position ?thisPositionOn18 ; rdf:type faldo:ExactPosition . ?ligand15 rdfs:subClassOf ?molecule16 . ?molecule16 rdfs:label 'substrate' . ?pfs19 up:annotation ?annotation20 . ?annotation20 faldo:begin ?pfsb21 ; faldo:end ?pfse22 ; up:ligand ?ligand23 ; rdf:type up:Binding_Site_Annotation . ?pfsb21 faldo:position ?thisPositionOn25 ; rdf:type faldo:ExactPosition . ?pfse22 faldo:position ?thisPositionOn26 ; rdf:type faldo:ExactPosition . ?ligand23 rdfs:subClassOf ?molecule24 . ?molecule24 rdfs:label 'substrate' . ?pfs27 up:annotation ?annotation28 . ?annotation28 faldo:begin ?pfsb29 ; faldo:end ?pfse30 ; up:ligand ?ligand31 ; rdf:type up:Binding_Site_Annotation . ?pfsb29 faldo:position ?thisPositionOn32 ; rdf:type faldo:ExactPosition . ?pfse30 faldo:position ?thisPositionOn33 ; rdf:type faldo:ExactPosition . ?ligand31 rdfs:subClassOf chebi:18408 . ?pfs34 up:annotation ?annotation35 . ?annotation35 faldo:begin ?pfsb36 ; faldo:end ?pfse37 ; up:ligand ?ligand38 ; rdf:type up:Binding_Site_Annotation . ?pfsb36 faldo:position ?thisPositionOn39 ; rdf:type faldo:ExactPosition . ?pfse37 faldo:position ?thisPositionOn40 ; rdf:type faldo:ExactPosition . ?ligand38 rdfs:subClassOf chebi:18408 . ?pfs41 up:annotation ?annotation42 . ?annotation42 faldo:begin ?pfsb43 ; faldo:end ?pfse44 ; up:ligand ?ligand45 ; rdf:type up:Binding_Site_Annotation . ?pfsb43 faldo:position ?thisPositionOn47 ; rdf:type faldo:ExactPosition . ?pfse44 faldo:position ?thisPositionOn48 ; rdf:type faldo:ExactPosition . ?ligand45 rdfs:subClassOf ?molecule46 . ?molecule46 rdfs:label 'substrate' . ?pfs49 up:annotation ?annotation50 . ?annotation50 faldo:begin ?pfsb51 ; faldo:end ?pfse52 ; up:ligand ?ligand53 ; rdf:type up:Binding_Site_Annotation . ?pfsb51 faldo:position ?thisPositionOn54 ; rdf:type faldo:ExactPosition . ?pfse52 faldo:position ?thisPositionOn55 ; rdf:type faldo:ExactPosition . ?ligand53 rdfs:subClassOf chebi:18408 . ?pfs56 up:annotation ?annotation57 . ?annotation57 faldo:begin ?pfsb58 ; faldo:end ?pfse59 ; up:ligand ?ligand60 ; rdf:type up:Binding_Site_Annotation . ?pfsb58 faldo:position ?thisPositionOn62 ; rdf:type faldo:ExactPosition . ?pfse59 faldo:position ?thisPositionOn63 ; rdf:type faldo:ExactPosition . ?ligand60 rdfs:subClassOf ?molecule61 . ?molecule61 rdfs:label 'substrate' . ?pfs64 up:annotation ?annotation65 . ?annotation65 faldo:begin ?pfsb66 ; faldo:end ?pfse67 ; up:ligand ?ligand68 ; rdf:type up:Binding_Site_Annotation . ?pfsb66 faldo:position ?thisPositionOn69 ; rdf:type faldo:ExactPosition . ?pfse67 faldo:position ?thisPositionOn70 ; rdf:type faldo:ExactPosition . ?ligand68 rdfs:subClassOf chebi:18408 . _:307399 a rdf:Statement ; up:attribution _:307374 ; rdf:subject ?gene0 ; rdf:predicate up:encodedBy ; rdf:object ?gene0 . _:307400 a rdf:Statement ; up:attribution _:307375 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation1 . _:307401 a rdf:Statement ; up:attribution _:307376 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:307402 a rdf:Statement ; up:attribution _:307377 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:307403 a rdf:Statement ; up:attribution _:307378 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:307404 a rdf:Statement ; up:attribution _:307379 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:307405 a rdf:Statement ; up:attribution _:307380 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:170 . _:307406 a rdf:Statement ; up:attribution _:307381 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:846 . _:307407 a rdf:Statement ; up:attribution _:307382 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:456 . _:307408 a rdf:Statement ; up:attribution _:307383 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0008851 . _:307409 a rdf:Statement ; up:attribution _:307384 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0009350 . _:307410 a rdf:Statement ; up:attribution _:307385 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0046336 . _:307411 a rdf:Statement ; up:attribution _:307386 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0031419 . _:307412 a rdf:Statement ; up:attribution _:307387 ; rdf:subject ?case7 ; rdf:predicate up:recommendedName ; rdf:object ?name8 . _:307413 a rdf:Statement ; up:attribution _:307388 ; rdf:subject ?case9 ; rdf:predicate up:recommendedName ; rdf:object ?name10 . _:307414 a rdf:Statement ; up:attribution _:307389 ; rdf:subject ?case9 ; rdf:predicate up:classifiedWith ; rdf:object keyword:1283 . _:307415 a rdf:Statement ; up:attribution _:307390 ; rdf:subject ?case9 ; rdf:predicate up:classifiedWith ; rdf:object GO:0031471 . _:307416 a rdf:Statement ; up:source unirule:MF_00861 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:307417 a rdf:Statement ; up:attribution _:307391 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:307418 a rdf:Statement ; up:source unirule:MF_00861 ; rdf:subject ?pfs19 ; rdf:predicate up:annotation ; rdf:object ?annotation20 . _:307419 a rdf:Statement ; up:attribution _:307392 ; rdf:subject ?pfs19 ; rdf:predicate up:annotation ; rdf:object ?annotation20 . _:307420 a rdf:Statement ; up:source unirule:MF_00861 ; rdf:subject ?pfs27 ; rdf:predicate up:annotation ; rdf:object ?annotation28 . _:307421 a rdf:Statement ; up:attribution _:307393 ; rdf:subject ?pfs27 ; rdf:predicate up:annotation ; rdf:object ?annotation28 . _:307422 a rdf:Statement ; up:source unirule:MF_00861 ; rdf:subject ?pfs34 ; rdf:predicate up:annotation ; rdf:object ?annotation35 . _:307423 a rdf:Statement ; up:attribution _:307394 ; rdf:subject ?pfs34 ; rdf:predicate up:annotation ; rdf:object ?annotation35 . _:307424 a rdf:Statement ; up:source unirule:MF_00861 ; rdf:subject ?pfs41 ; rdf:predicate up:annotation ; rdf:object ?annotation42 . _:307425 a rdf:Statement ; up:attribution _:307395 ; rdf:subject ?pfs41 ; rdf:predicate up:annotation ; rdf:object ?annotation42 . _:307426 a rdf:Statement ; up:source unirule:MF_00861 ; rdf:subject ?pfs49 ; rdf:predicate up:annotation ; rdf:object ?annotation50 . _:307427 a rdf:Statement ; up:attribution _:307396 ; rdf:subject ?pfs49 ; rdf:predicate up:annotation ; rdf:object ?annotation50 . _:307428 a rdf:Statement ; up:source unirule:MF_00861 ; rdf:subject ?pfs56 ; rdf:predicate up:annotation ; rdf:object ?annotation57 . _:307429 a rdf:Statement ; up:attribution _:307397 ; rdf:subject ?pfs56 ; rdf:predicate up:annotation ; rdf:object ?annotation57 . _:307430 a rdf:Statement ; up:source unirule:MF_00861 ; rdf:subject ?pfs64 ; rdf:predicate up:annotation ; rdf:object ?annotation65 . _:307431 a rdf:Statement ; up:attribution _:307398 ; rdf:subject ?pfs64 ; rdf:predicate up:annotation ; rdf:object ?annotation65 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00861 #Rule MF_00861 Created by:? on:2021-02-19 Modified by:Edouard de Castro on:2022-11-19 VALUES ?supertaxon71 {taxon:2 taxon:183963} ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00861 . ?thisOrganism rdfs:subClassOf+ ?supertaxon71 . BIND(URI(CONCAT(STR(?this), '#MF_00861a1')) AS ?annotation1) . BIND(URI(CONCAT(STR(?this), '#MF_00861a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_00861a4')) AS ?annotation4) . BIND(URI(CONCAT(STR(?this), '#MF_00861a5')) AS ?annotation5) . BIND(URI(CONCAT(STR(?this), '#MF_00861a6')) AS ?annotation6) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch76 faldo:location ?templateMotifSequenceMatchRegionP0AEJ677 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0AEJ679 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0AEJ6MF_0086172 . ?templateMotifSequenceMatchRegionP0AEJ677 faldo:begin ?templateMotifSequenceMatchBeginP0AEJ678 . ?templateMotifSequenceMatchBeginP0AEJ678 faldo:position ?templateMotifSequenceMatchBeginPositionP0AEJ673 ; faldo:reference isoform:P0AEJ6-1 . ?templateMotifSequenceProfileAlignmentOperationP0AEJ679 edam:has_input signature:MF_00861 ; rdf:type edam:operation_0300 . ?targetMotifMatch80 faldo:location ?targetMotifMatchRegionMatch81 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0086183 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0AEJ6MF_0086174 . ?targetMotifMatchRegionMatch81 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0086182 . ?targetMotifMatchRegionMatchBeginMF_0086182 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0086175 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0086183 edam:has_input signature:MF_00861 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AEJ6MF_0086172, 1, (STRLEN(?templateMotifCigarP0AEJ6MF_0086172) - STRLEN(REPLACE(?templateMotifCigarP0AEJ6MF_0086172, CONCAT('^(?:-*[^-]){', STR(((160 - ?templateMotifSequenceMatchBeginPositionP0AEJ673) + 1)), '}'), '')))), '[a-z]', '')) AS ?step184) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AEJ6MF_0086174, 1, (STRLEN(?targetMotifMatchCigarP0AEJ6MF_0086174) - STRLEN(REPLACE(?targetMotifMatchCigarP0AEJ6MF_0086174, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step184), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AEJ6MF_0086174, 1, (STRLEN(?targetMotifMatchCigarP0AEJ6MF_0086174) - STRLEN(REPLACE(?targetMotifMatchCigarP0AEJ6MF_0086174, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step184), '}'), '')))), '[^-]', ''))) AS ?step285) . BIND(((?step285 + ?targetMotifMatchRegionMatchBeginPositionMF_0086175) - 1) AS ?thisPositionOn17) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AEJ6MF_0086172, 1, (STRLEN(?templateMotifCigarP0AEJ6MF_0086172) - STRLEN(REPLACE(?templateMotifCigarP0AEJ6MF_0086172, CONCAT('^(?:-*[^-]){', STR(((162 - ?templateMotifSequenceMatchBeginPositionP0AEJ673) + 1)), '}'), '')))), '[a-z]', '')) AS ?step186) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AEJ6MF_0086174, 1, (STRLEN(?targetMotifMatchCigarP0AEJ6MF_0086174) - STRLEN(REPLACE(?targetMotifMatchCigarP0AEJ6MF_0086174, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step186), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AEJ6MF_0086174, 1, (STRLEN(?targetMotifMatchCigarP0AEJ6MF_0086174) - STRLEN(REPLACE(?targetMotifMatchCigarP0AEJ6MF_0086174, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step186), '}'), '')))), '[^-]', ''))) AS ?step287) . BIND(((?step287 + ?targetMotifMatchRegionMatchBeginPositionMF_0086175) - 1) AS ?thisPositionOn18) . BIND(?this AS ?pfs1t88) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfsb13) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfse14) . FILTER (REGEX('R[ARNDCQEGHILKMFPSTWYVBZJUOX]Q', SUBSTR(?thisSequenceValue, ?thisPositionOn17, (?thisPositionOn18 - ?thisPositionOn17)))) . BIND(URI(CONCAT(STR(?this), '#MF_00861a12')) AS ?annotation12) . BIND(?this AS ?pfs11) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch93 faldo:location ?templateMotifSequenceMatchRegionP0AEJ694 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0AEJ696 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0AEJ6MF_0086189 . ?templateMotifSequenceMatchRegionP0AEJ694 faldo:begin ?templateMotifSequenceMatchBeginP0AEJ695 . ?templateMotifSequenceMatchBeginP0AEJ695 faldo:position ?templateMotifSequenceMatchBeginPositionP0AEJ690 ; faldo:reference isoform:P0AEJ6-1 . ?templateMotifSequenceProfileAlignmentOperationP0AEJ696 edam:has_input signature:MF_00861 ; rdf:type edam:operation_0300 . ?targetMotifMatch97 faldo:location ?targetMotifMatchRegionMatch98 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00861100 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0AEJ6MF_0086191 . ?targetMotifMatchRegionMatch98 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0086199 . ?targetMotifMatchRegionMatchBeginMF_0086199 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0086192 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00861100 edam:has_input signature:MF_00861 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AEJ6MF_0086189, 1, (STRLEN(?templateMotifCigarP0AEJ6MF_0086189) - STRLEN(REPLACE(?templateMotifCigarP0AEJ6MF_0086189, CONCAT('^(?:-*[^-]){', STR(((193 - ?templateMotifSequenceMatchBeginPositionP0AEJ690) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1101) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AEJ6MF_0086191, 1, (STRLEN(?targetMotifMatchCigarP0AEJ6MF_0086191) - STRLEN(REPLACE(?targetMotifMatchCigarP0AEJ6MF_0086191, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1101), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AEJ6MF_0086191, 1, (STRLEN(?targetMotifMatchCigarP0AEJ6MF_0086191) - STRLEN(REPLACE(?targetMotifMatchCigarP0AEJ6MF_0086191, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1101), '}'), '')))), '[^-]', ''))) AS ?step2102) . BIND(((?step2102 + ?targetMotifMatchRegionMatchBeginPositionMF_0086192) - 1) AS ?thisPositionOn25) . BIND(?thisPositionOn25 AS ?thisPositionOn26) . BIND(?this AS ?pfs1t103) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfsb21) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn26))) AS ?pfse22) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn25, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_00861a20')) AS ?annotation20) . BIND(?this AS ?pfs19) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch108 faldo:location ?templateMotifSequenceMatchRegionP0AEJ6109 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0AEJ6111 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0AEJ6MF_00861104 . ?templateMotifSequenceMatchRegionP0AEJ6109 faldo:begin ?templateMotifSequenceMatchBeginP0AEJ6110 . ?templateMotifSequenceMatchBeginP0AEJ6110 faldo:position ?templateMotifSequenceMatchBeginPositionP0AEJ6105 ; faldo:reference isoform:P0AEJ6-1 . ?templateMotifSequenceProfileAlignmentOperationP0AEJ6111 edam:has_input signature:MF_00861 ; rdf:type edam:operation_0300 . ?targetMotifMatch112 faldo:location ?targetMotifMatchRegionMatch113 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00861115 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0AEJ6MF_00861106 . ?targetMotifMatchRegionMatch113 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00861114 . ?targetMotifMatchRegionMatchBeginMF_00861114 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00861107 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00861115 edam:has_input signature:MF_00861 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AEJ6MF_00861104, 1, (STRLEN(?templateMotifCigarP0AEJ6MF_00861104) - STRLEN(REPLACE(?templateMotifCigarP0AEJ6MF_00861104, CONCAT('^(?:-*[^-]){', STR(((194 - ?templateMotifSequenceMatchBeginPositionP0AEJ6105) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1116) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AEJ6MF_00861106, 1, (STRLEN(?targetMotifMatchCigarP0AEJ6MF_00861106) - STRLEN(REPLACE(?targetMotifMatchCigarP0AEJ6MF_00861106, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1116), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AEJ6MF_00861106, 1, (STRLEN(?targetMotifMatchCigarP0AEJ6MF_00861106) - STRLEN(REPLACE(?targetMotifMatchCigarP0AEJ6MF_00861106, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1116), '}'), '')))), '[^-]', ''))) AS ?step2117) . BIND(((?step2117 + ?targetMotifMatchRegionMatchBeginPositionMF_00861107) - 1) AS ?thisPositionOn32) . BIND(?thisPositionOn32 AS ?thisPositionOn33) . BIND(?this AS ?pfs1t118) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfsb29) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfse30) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn32, 1) = 'P')) . BIND(URI(CONCAT(STR(?this), '#MF_00861a28')) AS ?annotation28) . BIND(?this AS ?pfs27) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch123 faldo:location ?templateMotifSequenceMatchRegionP0AEJ6124 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0AEJ6126 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0AEJ6MF_00861119 . ?templateMotifSequenceMatchRegionP0AEJ6124 faldo:begin ?templateMotifSequenceMatchBeginP0AEJ6125 . ?templateMotifSequenceMatchBeginP0AEJ6125 faldo:position ?templateMotifSequenceMatchBeginPositionP0AEJ6120 ; faldo:reference isoform:P0AEJ6-1 . ?templateMotifSequenceProfileAlignmentOperationP0AEJ6126 edam:has_input signature:MF_00861 ; rdf:type edam:operation_0300 . ?targetMotifMatch127 faldo:location ?targetMotifMatchRegionMatch128 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00861130 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0AEJ6MF_00861121 . ?targetMotifMatchRegionMatch128 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00861129 . ?targetMotifMatchRegionMatchBeginMF_00861129 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00861122 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00861130 edam:has_input signature:MF_00861 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AEJ6MF_00861119, 1, (STRLEN(?templateMotifCigarP0AEJ6MF_00861119) - STRLEN(REPLACE(?templateMotifCigarP0AEJ6MF_00861119, CONCAT('^(?:-*[^-]){', STR(((246 - ?templateMotifSequenceMatchBeginPositionP0AEJ6120) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1131) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AEJ6MF_00861121, 1, (STRLEN(?targetMotifMatchCigarP0AEJ6MF_00861121) - STRLEN(REPLACE(?targetMotifMatchCigarP0AEJ6MF_00861121, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1131), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AEJ6MF_00861121, 1, (STRLEN(?targetMotifMatchCigarP0AEJ6MF_00861121) - STRLEN(REPLACE(?targetMotifMatchCigarP0AEJ6MF_00861121, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1131), '}'), '')))), '[^-]', ''))) AS ?step2132) . BIND(((?step2132 + ?targetMotifMatchRegionMatchBeginPositionMF_00861122) - 1) AS ?thisPositionOn39) . BIND(?thisPositionOn39 AS ?thisPositionOn40) . BIND(?this AS ?pfs1t133) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn39))) AS ?pfsb36) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfse37) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn39, 1) = 'Q')) . BIND(URI(CONCAT(STR(?this), '#MF_00861a35')) AS ?annotation35) . BIND(?this AS ?pfs34) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch138 faldo:location ?templateMotifSequenceMatchRegionP0AEJ6139 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0AEJ6141 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0AEJ6MF_00861134 . ?templateMotifSequenceMatchRegionP0AEJ6139 faldo:begin ?templateMotifSequenceMatchBeginP0AEJ6140 . ?templateMotifSequenceMatchBeginP0AEJ6140 faldo:position ?templateMotifSequenceMatchBeginPositionP0AEJ6135 ; faldo:reference isoform:P0AEJ6-1 . ?templateMotifSequenceProfileAlignmentOperationP0AEJ6141 edam:has_input signature:MF_00861 ; rdf:type edam:operation_0300 . ?targetMotifMatch142 faldo:location ?targetMotifMatchRegionMatch143 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00861145 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0AEJ6MF_00861136 . ?targetMotifMatchRegionMatch143 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00861144 . ?targetMotifMatchRegionMatchBeginMF_00861144 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00861137 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00861145 edam:has_input signature:MF_00861 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AEJ6MF_00861134, 1, (STRLEN(?templateMotifCigarP0AEJ6MF_00861134) - STRLEN(REPLACE(?templateMotifCigarP0AEJ6MF_00861134, CONCAT('^(?:-*[^-]){', STR(((287 - ?templateMotifSequenceMatchBeginPositionP0AEJ6135) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1146) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AEJ6MF_00861136, 1, (STRLEN(?targetMotifMatchCigarP0AEJ6MF_00861136) - STRLEN(REPLACE(?targetMotifMatchCigarP0AEJ6MF_00861136, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1146), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AEJ6MF_00861136, 1, (STRLEN(?targetMotifMatchCigarP0AEJ6MF_00861136) - STRLEN(REPLACE(?targetMotifMatchCigarP0AEJ6MF_00861136, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1146), '}'), '')))), '[^-]', ''))) AS ?step2147) . BIND(((?step2147 + ?targetMotifMatchRegionMatchBeginPositionMF_00861137) - 1) AS ?thisPositionOn47) . BIND(?thisPositionOn47 AS ?thisPositionOn48) . BIND(?this AS ?pfs1t148) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn47))) AS ?pfsb43) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn48))) AS ?pfse44) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn47, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_00861a42')) AS ?annotation42) . BIND(?this AS ?pfs41) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch153 faldo:location ?templateMotifSequenceMatchRegionP0AEJ6154 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0AEJ6156 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0AEJ6MF_00861149 . ?templateMotifSequenceMatchRegionP0AEJ6154 faldo:begin ?templateMotifSequenceMatchBeginP0AEJ6155 . ?templateMotifSequenceMatchBeginP0AEJ6155 faldo:position ?templateMotifSequenceMatchBeginPositionP0AEJ6150 ; faldo:reference isoform:P0AEJ6-1 . ?templateMotifSequenceProfileAlignmentOperationP0AEJ6156 edam:has_input signature:MF_00861 ; rdf:type edam:operation_0300 . ?targetMotifMatch157 faldo:location ?targetMotifMatchRegionMatch158 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00861160 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0AEJ6MF_00861151 . ?targetMotifMatchRegionMatch158 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00861159 . ?targetMotifMatchRegionMatchBeginMF_00861159 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00861152 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00861160 edam:has_input signature:MF_00861 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AEJ6MF_00861149, 1, (STRLEN(?templateMotifCigarP0AEJ6MF_00861149) - STRLEN(REPLACE(?templateMotifCigarP0AEJ6MF_00861149, CONCAT('^(?:-*[^-]){', STR(((295 - ?templateMotifSequenceMatchBeginPositionP0AEJ6150) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1161) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AEJ6MF_00861151, 1, (STRLEN(?targetMotifMatchCigarP0AEJ6MF_00861151) - STRLEN(REPLACE(?targetMotifMatchCigarP0AEJ6MF_00861151, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1161), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AEJ6MF_00861151, 1, (STRLEN(?targetMotifMatchCigarP0AEJ6MF_00861151) - STRLEN(REPLACE(?targetMotifMatchCigarP0AEJ6MF_00861151, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1161), '}'), '')))), '[^-]', ''))) AS ?step2162) . BIND(((?step2162 + ?targetMotifMatchRegionMatchBeginPositionMF_00861152) - 1) AS ?thisPositionOn54) . BIND(?thisPositionOn54 AS ?thisPositionOn55) . BIND(?this AS ?pfs1t163) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn54))) AS ?pfsb51) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn55))) AS ?pfse52) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn54, 1) = 'S')) . BIND(URI(CONCAT(STR(?this), '#MF_00861a50')) AS ?annotation50) . BIND(?this AS ?pfs49) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch168 faldo:location ?templateMotifSequenceMatchRegionP0AEJ6169 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0AEJ6171 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0AEJ6MF_00861164 . ?templateMotifSequenceMatchRegionP0AEJ6169 faldo:begin ?templateMotifSequenceMatchBeginP0AEJ6170 . ?templateMotifSequenceMatchBeginP0AEJ6170 faldo:position ?templateMotifSequenceMatchBeginPositionP0AEJ6165 ; faldo:reference isoform:P0AEJ6-1 . ?templateMotifSequenceProfileAlignmentOperationP0AEJ6171 edam:has_input signature:MF_00861 ; rdf:type edam:operation_0300 . ?targetMotifMatch172 faldo:location ?targetMotifMatchRegionMatch173 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00861175 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0AEJ6MF_00861166 . ?targetMotifMatchRegionMatch173 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00861174 . ?targetMotifMatchRegionMatchBeginMF_00861174 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00861167 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00861175 edam:has_input signature:MF_00861 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AEJ6MF_00861164, 1, (STRLEN(?templateMotifCigarP0AEJ6MF_00861164) - STRLEN(REPLACE(?templateMotifCigarP0AEJ6MF_00861164, CONCAT('^(?:-*[^-]){', STR(((362 - ?templateMotifSequenceMatchBeginPositionP0AEJ6165) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1176) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AEJ6MF_00861166, 1, (STRLEN(?targetMotifMatchCigarP0AEJ6MF_00861166) - STRLEN(REPLACE(?targetMotifMatchCigarP0AEJ6MF_00861166, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1176), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AEJ6MF_00861166, 1, (STRLEN(?targetMotifMatchCigarP0AEJ6MF_00861166) - STRLEN(REPLACE(?targetMotifMatchCigarP0AEJ6MF_00861166, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1176), '}'), '')))), '[^-]', ''))) AS ?step2177) . BIND(((?step2177 + ?targetMotifMatchRegionMatchBeginPositionMF_00861167) - 1) AS ?thisPositionOn62) . BIND(?thisPositionOn62 AS ?thisPositionOn63) . BIND(?this AS ?pfs1t178) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn62))) AS ?pfsb58) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn63))) AS ?pfse59) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn62, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_00861a57')) AS ?annotation57) . BIND(?this AS ?pfs56) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch183 faldo:location ?templateMotifSequenceMatchRegionP0AEJ6184 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0AEJ6186 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0AEJ6MF_00861179 . ?templateMotifSequenceMatchRegionP0AEJ6184 faldo:begin ?templateMotifSequenceMatchBeginP0AEJ6185 . ?templateMotifSequenceMatchBeginP0AEJ6185 faldo:position ?templateMotifSequenceMatchBeginPositionP0AEJ6180 ; faldo:reference isoform:P0AEJ6-1 . ?templateMotifSequenceProfileAlignmentOperationP0AEJ6186 edam:has_input signature:MF_00861 ; rdf:type edam:operation_0300 . ?targetMotifMatch187 faldo:location ?targetMotifMatchRegionMatch188 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00861190 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0AEJ6MF_00861181 . ?targetMotifMatchRegionMatch188 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00861189 . ?targetMotifMatchRegionMatchBeginMF_00861189 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00861182 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00861190 edam:has_input signature:MF_00861 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AEJ6MF_00861179, 1, (STRLEN(?templateMotifCigarP0AEJ6MF_00861179) - STRLEN(REPLACE(?templateMotifCigarP0AEJ6MF_00861179, CONCAT('^(?:-*[^-]){', STR(((401 - ?templateMotifSequenceMatchBeginPositionP0AEJ6180) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1191) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AEJ6MF_00861181, 1, (STRLEN(?targetMotifMatchCigarP0AEJ6MF_00861181) - STRLEN(REPLACE(?targetMotifMatchCigarP0AEJ6MF_00861181, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1191), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AEJ6MF_00861181, 1, (STRLEN(?targetMotifMatchCigarP0AEJ6MF_00861181) - STRLEN(REPLACE(?targetMotifMatchCigarP0AEJ6MF_00861181, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1191), '}'), '')))), '[^-]', ''))) AS ?step2192) . BIND(((?step2192 + ?targetMotifMatchRegionMatchBeginPositionMF_00861182) - 1) AS ?thisPositionOn69) . BIND(?thisPositionOn69 AS ?thisPositionOn70) . BIND(?this AS ?pfs1t193) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn69))) AS ?pfsb66) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn70))) AS ?pfse67) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn69, 1) = 'M')) . BIND(URI(CONCAT(STR(?this), '#MF_00861a65')) AS ?annotation65) . BIND(?this AS ?pfs64) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(?this AS ?case7) . BIND(URI(CONCAT(STR(?this), '#MF_00861a8')) AS ?name8) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(?this AS ?case9) . BIND(URI(CONCAT(STR(?this), '#MF_00861a10')) AS ?name10) . } }