CONSTRUCT { _:433893 up:source unirule:MF_01228 . _:433894 up:source unirule:MF_01228 . _:433895 up:source unirule:MF_01228 . _:433896 up:source unirule:MF_01228 . _:433897 up:source unirule:MF_01228 . _:433898 up:source unirule:MF_01228 . _:433899 up:source unirule:MF_01228 . _:433900 up:source unirule:MF_01228 . _:433901 up:source unirule:MF_01228 . _:433902 up:source unirule:MF_01228 . _:433903 up:source unirule:MF_01228 . _:433904 up:source unirule:MF_01228 . _:433905 up:source unirule:MF_01228 . _:433906 up:source unirule:MF_01228 . _:433907 up:source unirule:MF_01228 . _:433908 up:source unirule:MF_01228 . _:433909 up:source unirule:MF_01228 . _:433910 up:source unirule:MF_01228 . _:433911 up:source unirule:MF_01228 . _:433912 up:source unirule:MF_01228 . _:433913 up:source unirule:MF_01228 . _:433914 up:source unirule:MF_01228 . _:433915 up:source unirule:MF_01228 . _:433916 up:source unirule:MF_01228 . _:433917 up:source unirule:MF_01228 . _:433918 up:source unirule:MF_01228 . _:433919 up:source unirule:MF_01228 . _:433920 up:source unirule:MF_01228 . _:433921 up:source unirule:MF_01228 . ?this up:alternativeName ?name1 ; up:annotation ?annotation3 , ?annotation4 , ?annotation6 ; up:classifiedWith GO:0004825 , GO:0005524 , GO:0005737 , GO:0006431 , keyword:30 , keyword:436 , keyword:547 , keyword:648 , keyword:67 , keyword:963 ; up:recommendedName ?name0 . ?name0 up:ecName '6.1.1.10' ; up:fullName 'Methionine--tRNA ligase' ; rdf:type up:Structured_Name . ?name1 up:fullName 'Methionyl-tRNA synthetase' ; up:shortName 'MetRS' ; rdf:type up:Structured_Name . ?gene2 skos:prefLabel 'metG' . ?annotation3 a up:Function_Annotation ; rdfs:comment 'Catalyzes the attachment of L-methionine to tRNA(Met). Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.' . ?annotation4 up:activity ?activity5 ; rdf:type up:Catalytic_Activity_Annotation . ?activity5 up:catalyticActivity <http://rdf.rhea-db.org/13481>; up:enzymeClass <http://purl.uniprot.org/enzyme/6.1.1.10>. ?annotation6 a up:Subcellular_Location_Annotation . ?annotation6li7 up:cellularComponent <http://purl.uniprot.org/locations/null>. ?case9 up:classifiedWith keyword:694 , keyword:820 . ?case11 up:classifiedWith keyword:479 , keyword:862 . ?pfs12 up:annotation ?annotation13 . ?annotation13 faldo:begin ?pfsb14 ; faldo:end ?pfse15 ; up:ligand ?ligand16 ; rdf:type up:Binding_Site_Annotation . ?pfsb14 faldo:position ?thisPositionOn17 ; rdf:type faldo:ExactPosition . ?pfse15 faldo:position ?thisPositionOn18 ; rdf:type faldo:ExactPosition . ?ligand16 rdfs:subClassOf chebi:29105 . ?pfs19 up:annotation ?annotation20 . ?annotation20 faldo:begin ?pfsb21 ; faldo:end ?pfse22 ; up:ligand ?ligand23 ; rdf:type up:Binding_Site_Annotation . ?pfsb21 faldo:position ?thisPositionOn24 ; rdf:type faldo:ExactPosition . ?pfse22 faldo:position ?thisPositionOn25 ; rdf:type faldo:ExactPosition . ?ligand23 rdfs:subClassOf chebi:29105 . ?pfs26 up:annotation ?annotation27 . ?annotation27 faldo:begin ?pfsb28 ; faldo:end ?pfse29 ; up:ligand ?ligand30 ; rdf:type up:Binding_Site_Annotation . ?pfsb28 faldo:position ?thisPositionOn31 ; rdf:type faldo:ExactPosition . ?pfse29 faldo:position ?thisPositionOn32 ; rdf:type faldo:ExactPosition . ?ligand30 rdfs:subClassOf chebi:29105 . ?pfs33 up:annotation ?annotation34 . ?annotation34 faldo:begin ?pfsb35 ; faldo:end ?pfse36 ; up:ligand ?ligand37 ; rdf:type up:Binding_Site_Annotation . ?pfsb35 faldo:position ?thisPositionOn38 ; rdf:type faldo:ExactPosition . ?pfse36 faldo:position ?thisPositionOn39 ; rdf:type faldo:ExactPosition . ?ligand37 rdfs:subClassOf chebi:29105 . ?pfs40 up:annotation ?annotation41 . ?annotation41 faldo:begin ?pfsb42 ; faldo:end ?pfse43 ; up:ligand ?ligand44 ; rdf:type up:Binding_Site_Annotation . ?pfsb42 faldo:position ?thisPositionOn45 ; rdf:type faldo:ExactPosition . ?pfse43 faldo:position ?thisPositionOn46 ; rdf:type faldo:ExactPosition . ?ligand44 rdfs:subClassOf chebi:29105 . ?pfs47 up:annotation ?annotation48 . ?annotation48 faldo:begin ?pfsb49 ; faldo:end ?pfse50 ; up:ligand ?ligand51 ; rdf:type up:Binding_Site_Annotation . ?pfsb49 faldo:position ?thisPositionOn52 ; rdf:type faldo:ExactPosition . ?pfse50 faldo:position ?thisPositionOn53 ; rdf:type faldo:ExactPosition . ?ligand51 rdfs:subClassOf chebi:29105 . ?pfs54 up:annotation ?annotation55 . ?annotation55 faldo:begin ?pfsb56 ; faldo:end ?pfse57 ; rdf:type up:Motif_Annotation ; rdfs:comment "'HIGH' region" . ?pfsb56 faldo:position ?thisPositionOn58 ; rdf:type faldo:ExactPosition . ?pfse57 faldo:position ?thisPositionOn59 ; rdf:type faldo:ExactPosition . ?pfs60 up:annotation ?annotation61 . ?annotation61 faldo:begin ?pfsb62 ; faldo:end ?pfse63 ; rdf:type up:Motif_Annotation ; rdfs:comment "'KMSKS' region" . ?pfsb62 faldo:position ?thisPositionOn64 ; rdf:type faldo:ExactPosition . ?pfse63 faldo:position ?thisPositionOn65 ; rdf:type faldo:ExactPosition . ?pfs66 up:annotation ?annotation67 . ?annotation67 faldo:begin ?pfsb68 ; faldo:end ?pfse69 ; up:ligand ?ligand70 ; rdf:type up:Binding_Site_Annotation . ?pfsb68 faldo:position ?thisPositionOn71 ; rdf:type faldo:ExactPosition . ?pfse69 faldo:position ?thisPositionOn72 ; rdf:type faldo:ExactPosition . ?ligand70 rdfs:subClassOf chebi:30616 . _:433922 a rdf:Statement ; up:attribution _:433893 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:433923 a rdf:Statement ; up:attribution _:433894 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name1 . _:433924 a rdf:Statement ; up:attribution _:433895 ; rdf:subject ?gene2 ; rdf:predicate up:encodedBy ; rdf:object ?gene2 . _:433925 a rdf:Statement ; up:attribution _:433896 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:433926 a rdf:Statement ; up:attribution _:433897 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:433927 a rdf:Statement ; up:attribution _:433898 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:433928 a rdf:Statement ; up:attribution _:433899 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:963 . _:433929 a rdf:Statement ; up:attribution _:433900 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:30 . _:433930 a rdf:Statement ; up:attribution _:433901 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:648 . _:433931 a rdf:Statement ; up:attribution _:433902 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:436 . _:433932 a rdf:Statement ; up:attribution _:433903 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:67 . _:433933 a rdf:Statement ; up:attribution _:433904 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:547 . _:433934 a rdf:Statement ; up:attribution _:433905 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005524 . _:433935 a rdf:Statement ; up:attribution _:433906 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0004825 . _:433936 a rdf:Statement ; up:attribution _:433907 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006431 . _:433937 a rdf:Statement ; up:attribution _:433908 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005737 . _:433938 a rdf:Statement ; up:attribution _:433909 ; rdf:subject ?case9 ; rdf:predicate up:classifiedWith ; rdf:object keyword:694 . _:433939 a rdf:Statement ; up:attribution _:433910 ; rdf:subject ?case9 ; rdf:predicate up:classifiedWith ; rdf:object keyword:820 . _:433940 a rdf:Statement ; up:attribution _:433911 ; rdf:subject ?case11 ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:433941 a rdf:Statement ; up:attribution _:433912 ; rdf:subject ?case11 ; rdf:predicate up:classifiedWith ; rdf:object keyword:862 . _:433942 a rdf:Statement ; up:source unirule:MF_01228 ; rdf:subject ?pfs12 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:433943 a rdf:Statement ; up:attribution _:433913 ; rdf:subject ?pfs12 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:433944 a rdf:Statement ; up:source unirule:MF_01228 ; rdf:subject ?pfs19 ; rdf:predicate up:annotation ; rdf:object ?annotation20 . _:433945 a rdf:Statement ; up:attribution _:433914 ; rdf:subject ?pfs19 ; rdf:predicate up:annotation ; rdf:object ?annotation20 . _:433946 a rdf:Statement ; up:source unirule:MF_01228 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation27 . _:433947 a rdf:Statement ; up:attribution _:433915 ; rdf:subject ?pfs26 ; rdf:predicate up:annotation ; rdf:object ?annotation27 . _:433948 a rdf:Statement ; up:source unirule:MF_01228 ; rdf:subject ?pfs33 ; rdf:predicate up:annotation ; rdf:object ?annotation34 . _:433949 a rdf:Statement ; up:attribution _:433916 ; rdf:subject ?pfs33 ; rdf:predicate up:annotation ; rdf:object ?annotation34 . _:433950 a rdf:Statement ; up:source unirule:MF_01228 ; rdf:subject ?pfs40 ; rdf:predicate up:annotation ; rdf:object ?annotation41 . _:433951 a rdf:Statement ; up:attribution _:433917 ; rdf:subject ?pfs40 ; rdf:predicate up:annotation ; rdf:object ?annotation41 . _:433952 a rdf:Statement ; up:source unirule:MF_01228 ; rdf:subject ?pfs47 ; rdf:predicate up:annotation ; rdf:object ?annotation48 . _:433953 a rdf:Statement ; up:attribution _:433918 ; rdf:subject ?pfs47 ; rdf:predicate up:annotation ; rdf:object ?annotation48 . _:433954 a rdf:Statement ; up:source unirule:MF_01228 ; rdf:subject ?pfs54 ; rdf:predicate up:annotation ; rdf:object ?annotation55 . _:433955 a rdf:Statement ; up:attribution _:433919 ; rdf:subject ?pfs54 ; rdf:predicate up:annotation ; rdf:object ?annotation55 . _:433956 a rdf:Statement ; up:source unirule:MF_01228 ; rdf:subject ?pfs60 ; rdf:predicate up:annotation ; rdf:object ?annotation61 . _:433957 a rdf:Statement ; up:attribution _:433920 ; rdf:subject ?pfs60 ; rdf:predicate up:annotation ; rdf:object ?annotation61 . _:433958 a rdf:Statement ; up:source unirule:MF_01228 ; rdf:subject ?pfs66 ; rdf:predicate up:annotation ; rdf:object ?annotation67 . _:433959 a rdf:Statement ; up:attribution _:433921 ; rdf:subject ?pfs66 ; rdf:predicate up:annotation ; rdf:object ?annotation67 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01228 #Rule MF_01228 Created by:? on:2005-02-28 Modified by:Catherine Rivoire on:2025-07-03 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01228 . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(URI(CONCAT(STR(?this), '#MF_01228a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_01228a1')) AS ?name1) . BIND(URI(CONCAT(STR(?this), '#MF_01228a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_01228a4')) AS ?annotation4) . BIND(URI(CONCAT(STR(?this), '#MF_01228a6')) AS ?annotation6) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch77 faldo:location ?templateMotifSequenceMatchRegionP2339578 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP2339580 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP23395MF_0122873 . ?templateMotifSequenceMatchRegionP2339578 faldo:begin ?templateMotifSequenceMatchBeginP2339579 . ?templateMotifSequenceMatchBeginP2339579 faldo:position ?templateMotifSequenceMatchBeginPositionP2339574 ; faldo:reference isoform:P23395-1 . ?templateMotifSequenceProfileAlignmentOperationP2339580 edam:has_input signature:MF_01228 ; rdf:type edam:operation_0300 . ?targetMotifMatch81 faldo:location ?targetMotifMatchRegionMatch82 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0122884 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP23395MF_0122875 . ?targetMotifMatchRegionMatch82 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0122883 . ?targetMotifMatchRegionMatchBeginMF_0122883 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0122876 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0122884 edam:has_input signature:MF_01228 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFT_4) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP23395MF_0122873, 1, (STRLEN(?templateMotifCigarP23395MF_0122873) - STRLEN(REPLACE(?templateMotifCigarP23395MF_0122873, CONCAT('^(?:-*[^-]){', STR(((130 - ?templateMotifSequenceMatchBeginPositionP2339574) + 1)), '}'), '')))), '[a-z]', '')) AS ?step185) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP23395MF_0122875, 1, (STRLEN(?targetMotifMatchCigarP23395MF_0122875) - STRLEN(REPLACE(?targetMotifMatchCigarP23395MF_0122875, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step185), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP23395MF_0122875, 1, (STRLEN(?targetMotifMatchCigarP23395MF_0122875) - STRLEN(REPLACE(?targetMotifMatchCigarP23395MF_0122875, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step185), '}'), '')))), '[^-]', ''))) AS ?step286) . BIND(((?step286 + ?targetMotifMatchRegionMatchBeginPositionMF_0122876) - 1) AS ?thisPositionOn17) . BIND(?thisPositionOn17 AS ?thisPositionOn18) . BIND(?this AS ?pfs1t87) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfsb14) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfse15) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn17, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_01228a13')) AS ?annotation13) . BIND(?this AS ?pfs12) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch92 faldo:location ?templateMotifSequenceMatchRegionP2339593 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP2339595 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP23395MF_0122888 . ?templateMotifSequenceMatchRegionP2339593 faldo:begin ?templateMotifSequenceMatchBeginP2339594 . ?templateMotifSequenceMatchBeginP2339594 faldo:position ?templateMotifSequenceMatchBeginPositionP2339589 ; faldo:reference isoform:P23395-1 . ?templateMotifSequenceProfileAlignmentOperationP2339595 edam:has_input signature:MF_01228 ; rdf:type edam:operation_0300 . ?targetMotifMatch96 faldo:location ?targetMotifMatchRegionMatch97 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0122899 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP23395MF_0122890 . ?targetMotifMatchRegionMatch97 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0122898 . ?targetMotifMatchRegionMatchBeginMF_0122898 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0122891 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0122899 edam:has_input signature:MF_01228 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFT_5) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP23395MF_0122888, 1, (STRLEN(?templateMotifCigarP23395MF_0122888) - STRLEN(REPLACE(?templateMotifCigarP23395MF_0122888, CONCAT('^(?:-*[^-]){', STR(((144 - ?templateMotifSequenceMatchBeginPositionP2339589) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1100) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP23395MF_0122890, 1, (STRLEN(?targetMotifMatchCigarP23395MF_0122890) - STRLEN(REPLACE(?targetMotifMatchCigarP23395MF_0122890, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1100), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP23395MF_0122890, 1, (STRLEN(?targetMotifMatchCigarP23395MF_0122890) - STRLEN(REPLACE(?targetMotifMatchCigarP23395MF_0122890, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1100), '}'), '')))), '[^-]', ''))) AS ?step2101) . BIND(((?step2101 + ?targetMotifMatchRegionMatchBeginPositionMF_0122891) - 1) AS ?thisPositionOn24) . BIND(?thisPositionOn24 AS ?thisPositionOn25) . BIND(?this AS ?pfs2t102) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfsb21) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfse22) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn24, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_01228a20')) AS ?annotation20) . BIND(?this AS ?pfs19) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch107 faldo:location ?templateMotifSequenceMatchRegionP23395108 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP23395110 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP23395MF_01228103 . ?templateMotifSequenceMatchRegionP23395108 faldo:begin ?templateMotifSequenceMatchBeginP23395109 . ?templateMotifSequenceMatchBeginP23395109 faldo:position ?templateMotifSequenceMatchBeginPositionP23395104 ; faldo:reference isoform:P23395-1 . ?templateMotifSequenceProfileAlignmentOperationP23395110 edam:has_input signature:MF_01228 ; rdf:type edam:operation_0300 . ?targetMotifMatch111 faldo:location ?targetMotifMatchRegionMatch112 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01228114 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP23395MF_01228105 . ?targetMotifMatchRegionMatch112 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01228113 . ?targetMotifMatchRegionMatchBeginMF_01228113 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01228106 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01228114 edam:has_input signature:MF_01228 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFT_3) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP23395MF_01228103, 1, (STRLEN(?templateMotifCigarP23395MF_01228103) - STRLEN(REPLACE(?templateMotifCigarP23395MF_01228103, CONCAT('^(?:-*[^-]){', STR(((127 - ?templateMotifSequenceMatchBeginPositionP23395104) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1115) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP23395MF_01228105, 1, (STRLEN(?targetMotifMatchCigarP23395MF_01228105) - STRLEN(REPLACE(?targetMotifMatchCigarP23395MF_01228105, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1115), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP23395MF_01228105, 1, (STRLEN(?targetMotifMatchCigarP23395MF_01228105) - STRLEN(REPLACE(?targetMotifMatchCigarP23395MF_01228105, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1115), '}'), '')))), '[^-]', ''))) AS ?step2116) . BIND(((?step2116 + ?targetMotifMatchRegionMatchBeginPositionMF_01228106) - 1) AS ?thisPositionOn31) . BIND(?thisPositionOn31 AS ?thisPositionOn32) . BIND(?this AS ?pfs3t117) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn31))) AS ?pfsb28) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfse29) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn31, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_01228a27')) AS ?annotation27) . BIND(?this AS ?pfs26) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch122 faldo:location ?templateMotifSequenceMatchRegionP23395123 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP23395125 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP23395MF_01228118 . ?templateMotifSequenceMatchRegionP23395123 faldo:begin ?templateMotifSequenceMatchBeginP23395124 . ?templateMotifSequenceMatchBeginP23395124 faldo:position ?templateMotifSequenceMatchBeginPositionP23395119 ; faldo:reference isoform:P23395-1 . ?templateMotifSequenceProfileAlignmentOperationP23395125 edam:has_input signature:MF_01228 ; rdf:type edam:operation_0300 . ?targetMotifMatch126 faldo:location ?targetMotifMatchRegionMatch127 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01228129 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP23395MF_01228120 . ?targetMotifMatchRegionMatch127 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01228128 . ?targetMotifMatchRegionMatchBeginMF_01228128 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01228121 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01228129 edam:has_input signature:MF_01228 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFT_6) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP23395MF_01228118, 1, (STRLEN(?templateMotifCigarP23395MF_01228118) - STRLEN(REPLACE(?templateMotifCigarP23395MF_01228118, CONCAT('^(?:-*[^-]){', STR(((147 - ?templateMotifSequenceMatchBeginPositionP23395119) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1130) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP23395MF_01228120, 1, (STRLEN(?targetMotifMatchCigarP23395MF_01228120) - STRLEN(REPLACE(?targetMotifMatchCigarP23395MF_01228120, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1130), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP23395MF_01228120, 1, (STRLEN(?targetMotifMatchCigarP23395MF_01228120) - STRLEN(REPLACE(?targetMotifMatchCigarP23395MF_01228120, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1130), '}'), '')))), '[^-]', ''))) AS ?step2131) . BIND(((?step2131 + ?targetMotifMatchRegionMatchBeginPositionMF_01228121) - 1) AS ?thisPositionOn38) . BIND(?thisPositionOn38 AS ?thisPositionOn39) . BIND(?this AS ?pfs4t132) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn38))) AS ?pfsb35) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn39))) AS ?pfse36) . FILTER (REGEX('[HC]', SUBSTR(?thisSequenceValue, ?thisPositionOn38, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_01228a34')) AS ?annotation34) . BIND(?this AS ?pfs33) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch137 faldo:location ?templateMotifSequenceMatchRegionQ55729138 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ55729140 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ55729MF_01228133 . ?templateMotifSequenceMatchRegionQ55729138 faldo:begin ?templateMotifSequenceMatchBeginQ55729139 . ?templateMotifSequenceMatchBeginQ55729139 faldo:position ?templateMotifSequenceMatchBeginPositionQ55729134 ; faldo:reference isoform:Q55729-1 . ?templateMotifSequenceProfileAlignmentOperationQ55729140 edam:has_input signature:MF_01228 ; rdf:type edam:operation_0300 . ?targetMotifMatch141 faldo:location ?targetMotifMatchRegionMatch142 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01228144 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ55729MF_01228135 . ?targetMotifMatchRegionMatch142 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01228143 . ?targetMotifMatchRegionMatchBeginMF_01228143 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01228136 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01228144 edam:has_input signature:MF_01228 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFT_7) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ55729MF_01228133, 1, (STRLEN(?templateMotifCigarQ55729MF_01228133) - STRLEN(REPLACE(?templateMotifCigarQ55729MF_01228133, CONCAT('^(?:-*[^-]){', STR(((152 - ?templateMotifSequenceMatchBeginPositionQ55729134) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1145) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ55729MF_01228135, 1, (STRLEN(?targetMotifMatchCigarQ55729MF_01228135) - STRLEN(REPLACE(?targetMotifMatchCigarQ55729MF_01228135, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1145), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ55729MF_01228135, 1, (STRLEN(?targetMotifMatchCigarQ55729MF_01228135) - STRLEN(REPLACE(?targetMotifMatchCigarQ55729MF_01228135, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1145), '}'), '')))), '[^-]', ''))) AS ?step2146) . BIND(((?step2146 + ?targetMotifMatchRegionMatchBeginPositionMF_01228136) - 1) AS ?thisPositionOn45) . BIND(?thisPositionOn45 AS ?thisPositionOn46) . BIND(?this AS ?pfs5t147) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn45))) AS ?pfsb42) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn46))) AS ?pfse43) . FILTER (REGEX('[HC]', SUBSTR(?thisSequenceValue, ?thisPositionOn45, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_01228a41')) AS ?annotation41) . BIND(?this AS ?pfs40) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch152 faldo:location ?templateMotifSequenceMatchRegionP47267153 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP47267155 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP47267MF_01228148 . ?templateMotifSequenceMatchRegionP47267153 faldo:begin ?templateMotifSequenceMatchBeginP47267154 . ?templateMotifSequenceMatchBeginP47267154 faldo:position ?templateMotifSequenceMatchBeginPositionP47267149 ; faldo:reference isoform:P47267-1 . ?templateMotifSequenceProfileAlignmentOperationP47267155 edam:has_input signature:MF_01228 ; rdf:type edam:operation_0300 . ?targetMotifMatch156 faldo:location ?targetMotifMatchRegionMatch157 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01228159 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP47267MF_01228150 . ?targetMotifMatchRegionMatch157 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01228158 . ?targetMotifMatchRegionMatchBeginMF_01228158 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01228151 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01228159 edam:has_input signature:MF_01228 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFT_8) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP47267MF_01228148, 1, (STRLEN(?templateMotifCigarP47267MF_01228148) - STRLEN(REPLACE(?templateMotifCigarP47267MF_01228148, CONCAT('^(?:-*[^-]){', STR(((147 - ?templateMotifSequenceMatchBeginPositionP47267149) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1160) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP47267MF_01228150, 1, (STRLEN(?targetMotifMatchCigarP47267MF_01228150) - STRLEN(REPLACE(?targetMotifMatchCigarP47267MF_01228150, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1160), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP47267MF_01228150, 1, (STRLEN(?targetMotifMatchCigarP47267MF_01228150) - STRLEN(REPLACE(?targetMotifMatchCigarP47267MF_01228150, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1160), '}'), '')))), '[^-]', ''))) AS ?step2161) . BIND(((?step2161 + ?targetMotifMatchRegionMatchBeginPositionMF_01228151) - 1) AS ?thisPositionOn52) . BIND(?thisPositionOn52 AS ?thisPositionOn53) . BIND(?this AS ?pfs6t162) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn52))) AS ?pfsb49) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn53))) AS ?pfse50) . FILTER (REGEX('[HC]', SUBSTR(?thisSequenceValue, ?thisPositionOn52, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_01228a48')) AS ?annotation48) . BIND(?this AS ?pfs47) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch167 faldo:location ?templateMotifSequenceMatchRegionP23395168 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP23395170 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP23395MF_01228163 . ?templateMotifSequenceMatchRegionP23395168 faldo:begin ?templateMotifSequenceMatchBeginP23395169 . ?templateMotifSequenceMatchBeginP23395169 faldo:position ?templateMotifSequenceMatchBeginPositionP23395164 ; faldo:reference isoform:P23395-1 . ?templateMotifSequenceProfileAlignmentOperationP23395170 edam:has_input signature:MF_01228 ; rdf:type edam:operation_0300 . ?targetMotifMatch171 faldo:location ?targetMotifMatchRegionMatch172 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01228174 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP23395MF_01228165 . ?targetMotifMatchRegionMatch172 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01228173 . ?targetMotifMatchRegionMatchBeginMF_01228173 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01228166 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01228174 edam:has_input signature:MF_01228 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP23395MF_01228163, 1, (STRLEN(?templateMotifCigarP23395MF_01228163) - STRLEN(REPLACE(?templateMotifCigarP23395MF_01228163, CONCAT('^(?:-*[^-]){', STR(((12 - ?templateMotifSequenceMatchBeginPositionP23395164) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1175) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP23395MF_01228165, 1, (STRLEN(?targetMotifMatchCigarP23395MF_01228165) - STRLEN(REPLACE(?targetMotifMatchCigarP23395MF_01228165, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1175), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP23395MF_01228165, 1, (STRLEN(?targetMotifMatchCigarP23395MF_01228165) - STRLEN(REPLACE(?targetMotifMatchCigarP23395MF_01228165, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1175), '}'), '')))), '[^-]', ''))) AS ?step2176) . BIND(((?step2176 + ?targetMotifMatchRegionMatchBeginPositionMF_01228166) - 1) AS ?thisPositionOn58) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP23395MF_01228163, 1, (STRLEN(?templateMotifCigarP23395MF_01228163) - STRLEN(REPLACE(?templateMotifCigarP23395MF_01228163, CONCAT('^(?:-*[^-]){', STR(((22 - ?templateMotifSequenceMatchBeginPositionP23395164) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1177) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP23395MF_01228165, 1, (STRLEN(?targetMotifMatchCigarP23395MF_01228165) - STRLEN(REPLACE(?targetMotifMatchCigarP23395MF_01228165, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1177), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP23395MF_01228165, 1, (STRLEN(?targetMotifMatchCigarP23395MF_01228165) - STRLEN(REPLACE(?targetMotifMatchCigarP23395MF_01228165, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1177), '}'), '')))), '[^-]', ''))) AS ?step2178) . BIND(((?step2178 + ?targetMotifMatchRegionMatchBeginPositionMF_01228166) - 1) AS ?thisPositionOn59) . BIND(?this AS ?pfs7t179) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn58))) AS ?pfsb56) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn59))) AS ?pfse57) . FILTER (REGEX('[YDFAS]Y[ARNDCQEGHILKMFPSTWYVBZJUOX]{5)H[LIV]G[SHN]', SUBSTR(?thisSequenceValue, ?thisPositionOn58, (?thisPositionOn59 - ?thisPositionOn58)))) . BIND(URI(CONCAT(STR(?this), '#MF_01228a55')) AS ?annotation55) . BIND(?this AS ?pfs54) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch184 faldo:location ?templateMotifSequenceMatchRegionP23395185 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP23395187 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP23395MF_01228180 . ?templateMotifSequenceMatchRegionP23395185 faldo:begin ?templateMotifSequenceMatchBeginP23395186 . ?templateMotifSequenceMatchBeginP23395186 faldo:position ?templateMotifSequenceMatchBeginPositionP23395181 ; faldo:reference isoform:P23395-1 . ?templateMotifSequenceProfileAlignmentOperationP23395187 edam:has_input signature:MF_01228 ; rdf:type edam:operation_0300 . ?targetMotifMatch188 faldo:location ?targetMotifMatchRegionMatch189 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01228191 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP23395MF_01228182 . ?targetMotifMatchRegionMatch189 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01228190 . ?targetMotifMatchRegionMatchBeginMF_01228190 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01228183 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01228191 edam:has_input signature:MF_01228 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP23395MF_01228180, 1, (STRLEN(?templateMotifCigarP23395MF_01228180) - STRLEN(REPLACE(?templateMotifCigarP23395MF_01228180, CONCAT('^(?:-*[^-]){', STR(((297 - ?templateMotifSequenceMatchBeginPositionP23395181) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1192) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP23395MF_01228182, 1, (STRLEN(?targetMotifMatchCigarP23395MF_01228182) - STRLEN(REPLACE(?targetMotifMatchCigarP23395MF_01228182, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1192), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP23395MF_01228182, 1, (STRLEN(?targetMotifMatchCigarP23395MF_01228182) - STRLEN(REPLACE(?targetMotifMatchCigarP23395MF_01228182, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1192), '}'), '')))), '[^-]', ''))) AS ?step2193) . BIND(((?step2193 + ?targetMotifMatchRegionMatchBeginPositionMF_01228183) - 1) AS ?thisPositionOn64) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP23395MF_01228180, 1, (STRLEN(?templateMotifCigarP23395MF_01228180) - STRLEN(REPLACE(?templateMotifCigarP23395MF_01228180, CONCAT('^(?:-*[^-]){', STR(((301 - ?templateMotifSequenceMatchBeginPositionP23395181) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1194) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP23395MF_01228182, 1, (STRLEN(?targetMotifMatchCigarP23395MF_01228182) - STRLEN(REPLACE(?targetMotifMatchCigarP23395MF_01228182, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1194), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP23395MF_01228182, 1, (STRLEN(?targetMotifMatchCigarP23395MF_01228182) - STRLEN(REPLACE(?targetMotifMatchCigarP23395MF_01228182, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1194), '}'), '')))), '[^-]', ''))) AS ?step2195) . BIND(((?step2195 + ?targetMotifMatchRegionMatchBeginPositionMF_01228183) - 1) AS ?thisPositionOn65) . BIND(?this AS ?pfs7t196) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn64))) AS ?pfsb62) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn65))) AS ?pfse63) . FILTER (REGEX('K[MI][SG]K[ST]', SUBSTR(?thisSequenceValue, ?thisPositionOn64, (?thisPositionOn65 - ?thisPositionOn64)))) . BIND(URI(CONCAT(STR(?this), '#MF_01228a61')) AS ?annotation61) . BIND(?this AS ?pfs60) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch201 faldo:location ?templateMotifSequenceMatchRegionP47267202 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP47267204 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP47267MF_01228197 . ?templateMotifSequenceMatchRegionP47267202 faldo:begin ?templateMotifSequenceMatchBeginP47267203 . ?templateMotifSequenceMatchBeginP47267203 faldo:position ?templateMotifSequenceMatchBeginPositionP47267198 ; faldo:reference isoform:P47267-1 . ?templateMotifSequenceProfileAlignmentOperationP47267204 edam:has_input signature:MF_01228 ; rdf:type edam:operation_0300 . ?targetMotifMatch205 faldo:location ?targetMotifMatchRegionMatch206 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01228208 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP47267MF_01228199 . ?targetMotifMatchRegionMatch206 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01228207 . ?targetMotifMatchRegionMatchBeginMF_01228207 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01228200 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01228208 edam:has_input signature:MF_01228 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP47267MF_01228197, 1, (STRLEN(?templateMotifCigarP47267MF_01228197) - STRLEN(REPLACE(?templateMotifCigarP47267MF_01228197, CONCAT('^(?:-*[^-]){', STR(((300 - ?templateMotifSequenceMatchBeginPositionP47267198) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1209) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP47267MF_01228199, 1, (STRLEN(?targetMotifMatchCigarP47267MF_01228199) - STRLEN(REPLACE(?targetMotifMatchCigarP47267MF_01228199, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1209), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP47267MF_01228199, 1, (STRLEN(?targetMotifMatchCigarP47267MF_01228199) - STRLEN(REPLACE(?targetMotifMatchCigarP47267MF_01228199, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1209), '}'), '')))), '[^-]', ''))) AS ?step2210) . BIND(((?step2210 + ?targetMotifMatchRegionMatchBeginPositionMF_01228200) - 1) AS ?thisPositionOn71) . BIND(?thisPositionOn71 AS ?thisPositionOn72) . BIND(?this AS ?pfs8t211) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn71))) AS ?pfsb68) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn72))) AS ?pfse69) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn71, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_01228a67')) AS ?annotation67) . BIND(?this AS ?pfs66) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag212) . } BIND(IF(BOUND(?tagFT_3), ?caseWithTag212, ?UNBOUND_VARIABLE) AS ?case8) . OPTIONAL { ?this a up:Protein . ?this rdfs:seeAlso <https://purl.expasy.org/prosite/signature/PS50886>. BIND(?this AS ?case9) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . FILTER (! (EXISTS { ?this rdfs:seeAlso <https://purl.expasy.org/prosite/signature/PS50886>. })) . BIND(?this AS ?case10) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag213) . } BIND(IF((BOUND(?tagFT_3) || BOUND(?tagFT_4) || BOUND(?tagFT_5) || BOUND(?tagFT_6) || BOUND(?tagFT_7) || BOUND(?tagFT_8)), ?caseWithTag213, ?UNBOUND_VARIABLE) AS ?case11) . }